mRNA_C-tenellus_contig10947.4.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10947.4.1 vs. uniprot
Match: D8LNQ9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNQ9_ECTSI) HSP 1 Score: 84.7 bits (208), Expect = 1.010e-17 Identity = 40/60 (66.67%), Postives = 48/60 (80.00%), Query Frame = 1 Query: 1 AVELCVEWLWEIREKVLPQEYFVLVCTFVGIQVVGLNEGLLVGAGCSVLSFVVSYASEQR 180 AVEL VEWLWE+REK+L EYFVL+ TFV IQVVGLN+GL+ G S FV+SYASE++ Sbjct: 357 AVELSVEWLWEVREKLLAYEYFVLLATFVAIQVVGLNQGLVAGVAFSTAIFVISYASERK 416
BLAST of mRNA_C-tenellus_contig10947.4.1 vs. uniprot
Match: A0A835ZH57_9STRA (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH57_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 2.670e-12 Identity = 33/59 (55.93%), Postives = 42/59 (71.19%), Query Frame = 1 Query: 1 AVELCVEWLWEIREKVLPQEYFVLVCTFVGIQVVGLNEGLLVGAGCSVLSFVVSYASEQ 177 A EL +EWL E+R K+L EY VL+ TF IQ+ GLN GL++G C++L FV SYASE Sbjct: 455 AWELMIEWLLEVRSKLLWHEYLVLLLTFSAIQLFGLNTGLIIGIACAMLGFVTSYASES 513
BLAST of mRNA_C-tenellus_contig10947.4.1 vs. uniprot
Match: A0A7S3XM01_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XM01_HETAK) HSP 1 Score: 63.5 bits (153), Expect = 1.630e-10 Identity = 28/60 (46.67%), Postives = 41/60 (68.33%), Query Frame = 1 Query: 1 AVELCVEWLWEIREKVLPQEYFVLVCTFVGIQVVGLNEGLLVGAGCSVLSFVVSYASEQR 180 A+EL +EWL E+R K+ P EY VL+ TF+ I + L +G+L+G +VL F+V YA E + Sbjct: 183 AIELMLEWLVEVRAKLPPGEYLVLLVTFLAINITSLEQGMLIGVAAAVLRFIVLYAQEHQ 242
BLAST of mRNA_C-tenellus_contig10947.4.1 vs. uniprot
Match: M4BA94_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BA94_HYAAE) HSP 1 Score: 55.8 bits (133), Expect = 1.510e-7 Identity = 24/59 (40.68%), Postives = 41/59 (69.49%), Query Frame = 1 Query: 1 AVELCVEWLWEIREKVLPQEYFVLVCTFVGIQVVGLNEGLLVGAGCSVLSFVVSYASEQ 177 AV+L +EWL + K+LP+EY VL +F+ I +V L G+++G G ++L+F++ YA + Sbjct: 526 AVDLMMEWLVHVYHKILPREYIVLWLSFIAINMVSLELGMVLGIGFAILNFMIGYAQVR 584
BLAST of mRNA_C-tenellus_contig10947.4.1 vs. uniprot
Match: A0A662XN69_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XN69_9STRA) HSP 1 Score: 55.5 bits (132), Expect = 2.030e-7 Identity = 24/59 (40.68%), Postives = 41/59 (69.49%), Query Frame = 1 Query: 1 AVELCVEWLWEIREKVLPQEYFVLVCTFVGIQVVGLNEGLLVGAGCSVLSFVVSYASEQ 177 A++L VEWL + K+LP+EY VL +F+ I +V L G+++G G ++L+F++ YA + Sbjct: 19 AIDLMVEWLVHVYHKILPREYVVLWLSFIAINLVSLELGMVLGIGFAILNFLLGYAQVR 77
BLAST of mRNA_C-tenellus_contig10947.4.1 vs. uniprot
Match: A0A5D6Y9G9_9STRA (Sulfate_transp domain-containing protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y9G9_9STRA) HSP 1 Score: 55.5 bits (132), Expect = 2.040e-7 Identity = 26/59 (44.07%), Postives = 40/59 (67.80%), Query Frame = 1 Query: 1 AVELCVEWLWEIREKVLPQEYFVLVCTFVGIQVVGLNEGLLVGAGCSVLSFVVSYASEQ 177 A++L VEWL + K+LP+EY VL +FV I V L G+L+G G ++L+F++ YA + Sbjct: 429 AIDLLVEWLVHVYHKILPREYVVLWLSFVAINWVSLELGMLLGIGFAILNFMLGYAEVR 487
BLAST of mRNA_C-tenellus_contig10947.4.1 vs. uniprot
Match: H3GTT6_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GTT6_PHYRM) HSP 1 Score: 55.1 bits (131), Expect = 2.820e-7 Identity = 24/59 (40.68%), Postives = 41/59 (69.49%), Query Frame = 1 Query: 1 AVELCVEWLWEIREKVLPQEYFVLVCTFVGIQVVGLNEGLLVGAGCSVLSFVVSYASEQ 177 A++L +EWL + KVLP+EY VL +F+ I +V L G+++G G ++L+F++ YA + Sbjct: 457 AIDLMMEWLVHVYHKVLPREYVVLWLSFIAINMVSLELGMVLGVGFAILNFLLGYAQVR 515
BLAST of mRNA_C-tenellus_contig10947.4.1 vs. uniprot
Match: A0A3F2RX17_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RX17_9STRA) HSP 1 Score: 55.1 bits (131), Expect = 2.840e-7 Identity = 23/59 (38.98%), Postives = 41/59 (69.49%), Query Frame = 1 Query: 1 AVELCVEWLWEIREKVLPQEYFVLVCTFVGIQVVGLNEGLLVGAGCSVLSFVVSYASEQ 177 A++L VEWL + K+LP+EY VL +F+ I +V L G+++G G ++++F++ YA + Sbjct: 1819 AIDLMVEWLVHVYHKILPREYVVLWLSFIAINLVSLELGMVLGVGFAIINFLLGYAQVR 1877
BLAST of mRNA_C-tenellus_contig10947.4.1 vs. uniprot
Match: D0MXB6_PHYIT (Sulfate Permease (SulP) Family n=3 Tax=Phytophthora TaxID=4783 RepID=D0MXB6_PHYIT) HSP 1 Score: 54.7 bits (130), Expect = 3.850e-7 Identity = 22/59 (37.29%), Postives = 41/59 (69.49%), Query Frame = 1 Query: 1 AVELCVEWLWEIREKVLPQEYFVLVCTFVGIQVVGLNEGLLVGAGCSVLSFVVSYASEQ 177 A++L +EWL + K+LP+EY VL+ +F+ I +V L G+++G G ++++F+ YA + Sbjct: 488 AIDLMMEWLVHVYHKILPREYVVLLLSFIAINMVSLELGMILGIGFAIINFLFGYAQVR 546
BLAST of mRNA_C-tenellus_contig10947.4.1 vs. uniprot
Match: A0A484E0J7_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E0J7_BRELC) HSP 1 Score: 54.3 bits (129), Expect = 5.270e-7 Identity = 22/59 (37.29%), Postives = 42/59 (71.19%), Query Frame = 1 Query: 1 AVELCVEWLWEIREKVLPQEYFVLVCTFVGIQVVGLNEGLLVGAGCSVLSFVVSYASEQ 177 A++L +EWL + +K+LP+EY VL +F+ I +V L G+++G G ++++F++ YA + Sbjct: 458 AIDLMLEWLVHVYQKILPREYVVLWLSFIAINMVSLELGMVLGIGFAIINFLLGYAQVR 516 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10947.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10947.4.1 >prot_C-tenellus_contig10947.4.1 ID=prot_C-tenellus_contig10947.4.1|Name=mRNA_C-tenellus_contig10947.4.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=61bp AVELCVEWLWEIREKVLPQEYFVLVCTFVGIQVVGLNEGLLVGAGCSVLSback to top mRNA from alignment at C-tenellus_contig10947:4355..5176- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10947.4.1 ID=mRNA_C-tenellus_contig10947.4.1|Name=mRNA_C-tenellus_contig10947.4.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=822bp|location=Sequence derived from alignment at C-tenellus_contig10947:4355..5176- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10947:4355..5176- >mRNA_C-tenellus_contig10947.4.1 ID=mRNA_C-tenellus_contig10947.4.1|Name=mRNA_C-tenellus_contig10947.4.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=183bp|location=Sequence derived from alignment at C-tenellus_contig10947:4355..5176- (Choristocarpus tenellus KU2346)back to top |