mRNA_C-tenellus_contig10938.1.2 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10938.1.2 vs. uniprot
Match: A0A836CP52_9STRA (Trehalose-phosphatase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP52_9STRA) HSP 1 Score: 105 bits (262), Expect = 3.450e-20 Identity = 74/186 (39.78%), Postives = 99/186 (53.23%), Query Frame = 1 Query: 262 VYELQPDIKWNKGNAVVWLLEKLVVPPVRGVGQGLDGIVVGADKSGRDGPENGGG------------------------DXXXDDDG-----VFTIFIGDDKTDENAFKVFMDNPSDTSSSGQRQCGRPYPYQRHHAGIGILVSEESRETNAAYTLKNPVEVAEFLSRLVTVGRERHLLPVNASSE 732 V+ELQPD++WNKG+AVVW+L+ L G+ + + R+ + G D D+D VFTIFIGDD+TDE+AF+VF S++G + G+ G+GILVSEESR+T+AAYTL+NP EVAE L RLV VG R+L PV +E Sbjct: 295 VFELQPDVQWNKGSAVVWMLDML------GLSRHSKADATSFQIAEREDAQAGXXXXXXXXXXXXXXXXLEEPEEASLVDSDGDEDAPPHGEVFTIFIGDDRTDEDAFRVF-------SAAGNCKKGQ-------QPGLGILVSEESRDTHAAYTLRNPDEVAELLQRLVQVGETRNLRPVRVCTE 460
BLAST of mRNA_C-tenellus_contig10938.1.2 vs. uniprot
Match: D7G992_ECTSI (Trehalose-6-phosphate phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G992_ECTSI) HSP 1 Score: 98.6 bits (244), Expect = 1.920e-18 Identity = 69/183 (37.70%), Postives = 88/183 (48.09%), Query Frame = 1 Query: 238 VKMVACTVVYELQPDIKWNKGNAVVWLLEKLVVPPVRGVGQ---------------------------GLDGIVVGADKSGRDGPENGGGDXXXDDDG-VFTIFIGDDKTDENAFKVFMDNPSDTSSSGQRQCGRPYPYQRHHAGIGILVSEESRETNAAYTLKNPVEVAEFLSRLVTVGRER 702 ++M + V+ELQPDI W+KG AV+WLL+KLV+P + + GD + G FTIFIGDDKTDENAF+V G+ + H G+GILVSEESRETNAAYTL+NP EVA FL ++ +G ER Sbjct: 216 IRMGSGKEVFELQPDIAWDKGKAVLWLLDKLVMPMAQAPEEPAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDYDDEYSGRFFTIFIGDDKTDENAFRVL------NGDMGEDRA--------RHDGVGILVSEESRETNAAYTLRNPDEVASFLEKIAMLGSER 384
BLAST of mRNA_C-tenellus_contig10938.1.2 vs. uniprot
Match: A0A6H5KE57_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE57_9PHAE) HSP 1 Score: 84.7 bits (208), Expect = 6.210e-16 Identity = 46/83 (55.42%), Postives = 54/83 (65.06%), Query Frame = 1 Query: 454 FTIFIGDDKTDENAFKVFMDNPSDTSSSGQRQCGRPYPYQRHHAGIGILVSEESRETNAAYTLKNPVEVAEFLSRLVTVGRER 702 FTIFIGDDKTDENAF+V G+ + H G+GILVSEESRETNAAYTL+NP EVA FL ++ +G ER Sbjct: 50 FTIFIGDDKTDENAFRVL------NGDMGEDRA--------RHDGVGILVSEESRETNAAYTLRNPDEVASFLEKIAKLGSER 118
BLAST of mRNA_C-tenellus_contig10938.1.2 vs. uniprot
Match: A0A835ZEL8_9STRA (Trehalose-phosphatase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEL8_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 6.940e-16 Identity = 81/220 (36.82%), Postives = 96/220 (43.64%), Query Frame = 1 Query: 262 VYELQPDIKWNKGNAVVWLLEKLVV-------PPVRGVGQGLDG--IVVGADKSGRDGPEN-------------------GGG-------------------------------DXXXDDDG----------VFTIFIGDDKTDENAFKVFMDNPSDTSSSGQRQCGRPYPYQRHHAGIGILVSEESRETNAAYTLKNPVEVAEFLSRLVTVGRERHLLP 714 V+ELQPD+ WNKG AVVW+LE L + P G G+G+ G D G N G D D+D VFTIFIGDDK DE+AF+VF SSS Q+ G+GILVSEESR T+AAYTLKNP EVAE LSRLV++G+ R L P Sbjct: 283 VFELQPDVHWNKGCAVVWMLEMLGLSAPASESPTDSGSGEGVHNGHFTEGGDVHNGFGLRNVRSHSAASSHTGDTCKKCEGAALSRTSSLDSSEPRLFRGERCVHGMQLRSQHEDTLNDEDEDAVYLSICQQVFTIFIGDDKADEDAFQVFTGE----SSSAQQP------------GLGILVSEESRATHAAYTLKNPQEVAELLSRLVSIGQSRSLQP 486
BLAST of mRNA_C-tenellus_contig10938.1.2 vs. uniprot
Match: A0A6A3TKE9_9STRA (Trehalose 6-phosphate phosphatase n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3TKE9_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 5.390e-15 Identity = 59/166 (35.54%), Postives = 84/166 (50.60%), Query Frame = 1 Query: 208 SRKNRPDATLVKMVACTVVYELQPDIKWNKGNAVVWLLEKLVVPPVRGVGQGLDGIVVGADKSGRDGPENGGGDXXXDDDGVFTIFIGDDKTDENAFKVFMDNPSDTSSSGQRQCGRPYPYQRHHAGIGILVSEESRETNAAYTLKNPVEVAEFLSRLVTVG-RER 702 +R R ++M +VYE +P I WNKG A++WLL+ L GLD + D V+TI+IGDD TDE+AF++F Q C R G+GI+V+EES+ T+A++TL++ EV EFL+RL+ G RER Sbjct: 186 ARTVRDQHPRIRMSEGKMVYEFKPKIDWNKGKALLWLLQAL----------GLD-----------------------EHDDVYTIYIGDDTTDEDAFQLF-----------QAHCNRK--------GVGIVVTEESKSTDASFTLRDTGEVCEFLNRLIACGDRER 299
BLAST of mRNA_C-tenellus_contig10938.1.2 vs. uniprot
Match: A0A7R9YED3_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YED3_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 3.330e-14 Identity = 52/145 (35.86%), Postives = 79/145 (54.48%), Query Frame = 1 Query: 262 VYELQPDIKWNKGNAVVWLLEKLVVPPVRGVGQGLDGIVVGADKSGRDGPEN---GGGDXXXDDDGVFTIFIGDDKTDENAFKVFMDNPSDTSSSGQRQCGRPYPYQRH--HAGIGILVSEESRETNAAYTLKNPVEVAEFLSRL 681 V+EL+PDI+W+KG AV+W+L L R ++ ++S D ++ D +FTI+IGDD TDE+AF VF D + R R +G+GI+V+E++R+T A +TL++P +V EFL RL Sbjct: 49 VWELRPDIQWDKGQAVLWVLRNLEDFRRR------QHAMLAQEESNSDSDQSTKTDSSDYSEKQTSLFTIYIGDDTTDEDAFAVFSDQDDEECEGSYLAPSRGAGSARDLDFSGMGIVVTEDARDTKAQFTLRDPSQVTEFLERL 187
BLAST of mRNA_C-tenellus_contig10938.1.2 vs. uniprot
Match: G4ZCL5_PHYSP (Trehalose 6-phosphate phosphatase n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZCL5_PHYSP) HSP 1 Score: 84.0 bits (206), Expect = 5.150e-14 Identity = 56/156 (35.90%), Postives = 81/156 (51.92%), Query Frame = 1 Query: 238 VKMVACTVVYELQPDIKWNKGNAVVWLLEKLVVPPVRGVGQGLDGIVVGADKSGRDGPENGGGDXXXDDDGVFTIFIGDDKTDENAFKVFMDNPSDTSSSGQRQCGRPYPYQRHHAGIGILVSEESRETNAAYTLKNPVEVAEFLSRLVTVG-RER 702 ++M +VYE +P I WNKG A++WLL+ L GLD + D V+TI+IGDD TDE+AF++F + Y R G+GI+V+EES+ T+A++TL++ EV EFL+RL+ G RER Sbjct: 187 IRMSEGKMVYEFKPKIDWNKGKALLWLLQAL----------GLD-----------------------EHDDVYTIYIGDDTTDEDAFQLFQAH-----------------YNRK--GVGIVVTEESKSTDASFTLRDTSEVCEFLNRLIACGDRER 290
BLAST of mRNA_C-tenellus_contig10938.1.2 vs. uniprot
Match: A0A2P4XAB5_9STRA (Trehalose 6-phosphate phosphatase n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XAB5_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 5.290e-14 Identity = 54/152 (35.53%), Postives = 76/152 (50.00%), Query Frame = 1 Query: 259 VVYELQPDIKWNKGNAVVWLLEKLVVPPVRGVGQGLDGIVVGADKSGRDGPENGGGDXXXDDDGVFTIFIGDDKTDENAFKVFMDNPSDTSSSGQRQCGRPYPYQRHHAGIGILVSEESRETNAAYTLKNPVEVAEFLSRLVTVGRERHLLP 714 +VYE +P I WNKG A++WLL+ L GLD + D V+TI+IGDD TDE+AF++F + Y R G+GI+V+EES T+A++TL++ EV EFL+RL+T G P Sbjct: 197 MVYEFKPKIDWNKGKALLWLLQAL----------GLDEL-----------------------DDVYTIYIGDDTTDEDAFRLFQAH-----------------YNRK--GVGIVVTEESMSTDASFTLRDTNEVCEFLNRLITCGDHARSAP 296
BLAST of mRNA_C-tenellus_contig10938.1.2 vs. uniprot
Match: A0A329T1E2_9STRA (Trehalose 6-phosphate phosphatase n=3 Tax=Phytophthora TaxID=4783 RepID=A0A329T1E2_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 5.660e-14 Identity = 54/152 (35.53%), Postives = 78/152 (51.32%), Query Frame = 1 Query: 238 VKMVACTVVYELQPDIKWNKGNAVVWLLEKLVVPPVRGVGQGLDGIVVGADKSGRDGPENGGGDXXXDDDGVFTIFIGDDKTDENAFKVFMDNPSDTSSSGQRQCGRPYPYQRHHAGIGILVSEESRETNAAYTLKNPVEVAEFLSRLVTVG 693 ++M +VYE +P I WNKG A++WLL+ L GLD + D V+TI+IGDD TDE+AF++F + Y R G+GI+V+EES T+A++TL++ EV EFL+RL+T G Sbjct: 194 IRMNEGKMVYEFKPKIDWNKGKALLWLLQAL----------GLDEL-----------------------DDVYTIYIGDDTTDEDAFRLFQAH-----------------YNRK--GVGIVVTEESVSTDASFTLRDTSEVCEFLNRLITCG 293
BLAST of mRNA_C-tenellus_contig10938.1.2 vs. uniprot
Match: A0A484DY67_BRELC (Trehalose 6-phosphate phosphatase n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DY67_BRELC) HSP 1 Score: 83.6 bits (205), Expect = 7.320e-14 Identity = 52/145 (35.86%), Postives = 72/145 (49.66%), Query Frame = 1 Query: 259 VVYELQPDIKWNKGNAVVWLLEKLVVPPVRGVGQGLDGIVVGADKSGRDGPENGGGDXXXDDDGVFTIFIGDDKTDENAFKVFMDNPSDTSSSGQRQCGRPYPYQRHHAGIGILVSEESRETNAAYTLKNPVEVAEFLSRLVTVG 693 +VYE +P I WNKG A++WLL+ L GLD + D V+TI+IGDD TDE+AF++F Q H G+GI+V+EES T+A +TL++ EV EFL+RL+ G Sbjct: 205 MVYEFKPKIDWNKGKALLWLLKAL----------GLD-----------------------EHDDVYTIYIGDDVTDEDAFRLFQ-------------------VQNKHKGVGIIVTEESLPTDALFTLRDTSEVCEFLNRLIACG 297 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10938.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10938.1.2 >prot_C-tenellus_contig10938.1.2 ID=prot_C-tenellus_contig10938.1.2|Name=mRNA_C-tenellus_contig10938.1.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=213bp MVACTVVYELQPDIKWNKGNAVVWLLEKLVVPPVRGVGQGLDGIVVGADKback to top mRNA from alignment at C-tenellus_contig10938:170..2767- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10938.1.2 ID=mRNA_C-tenellus_contig10938.1.2|Name=mRNA_C-tenellus_contig10938.1.2|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2598bp|location=Sequence derived from alignment at C-tenellus_contig10938:170..2767- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10938:170..2767- >mRNA_C-tenellus_contig10938.1.2 ID=mRNA_C-tenellus_contig10938.1.2|Name=mRNA_C-tenellus_contig10938.1.2|organism=Choristocarpus tenellus KU2346|type=CDS|length=639bp|location=Sequence derived from alignment at C-tenellus_contig10938:170..2767- (Choristocarpus tenellus KU2346)back to top |