mRNA_C-tenellus_contig10931.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10931.1.1 vs. uniprot
Match: D8LQA2_ECTSI (Cationic amino acid transporter-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQA2_ECTSI) HSP 1 Score: 193 bits (490), Expect = 2.200e-55 Identity = 97/137 (70.80%), Postives = 112/137 (81.75%), Query Frame = 1 Query: 16 YNTLSDNRMAASRRFDGIIGSRALLRKPMPVVLEEVTQDKLERHLTLFDLVVIGVAGTIGSGMFALVGLIASSYAGPAGVISWTLAGLGCMLSGLSYAELSSMIPSEGGAYAYAYVALGELPAMLTGWLLTLEVGNS 426 YNTLS N SRR G+ G AL+RKP+ VVL E + D L RHLTLFDLVVIGVAGT+GSG+FA+VGLI S+YAGPA V+SW LAG+GC+ SGLSYAELSS+IPSEGG YAYA+VALGELPA++T W LTLE G S Sbjct: 6 YNTLSQNTRTPSRRLPGLPGVPALIRKPLAVVLMEASNDPLVRHLTLFDLVVIGVAGTVGSGIFAIVGLIGSTYAGPAAVVSWVLAGIGCVFSGLSYAELSSIIPSEGGTYAYAFVALGELPAIVTAWCLTLEFGIS 142
BLAST of mRNA_C-tenellus_contig10931.1.1 vs. uniprot
Match: A0A7R9UE61_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UE61_9STRA) HSP 1 Score: 148 bits (374), Expect = 2.460e-39 Identity = 73/116 (62.93%), Postives = 88/116 (75.86%), Query Frame = 1 Query: 79 RALLRKPMPVVLEEVTQDKLERHLTLFDLVVIGVAGTIGSGMFALVGLIASSYAGPAGVISWTLAGLGCMLSGLSYAELSSMIPSEGGAYAYAYVALGELPAMLTGWLLTLEVGNS 426 R LRKP+ VV E KL RHL+LFDL+ IG+ GT+GSG+F L GLIA YAGPA V+SW AG GC+LSG++YAE+SS +PS G +YAY YVALGELPA++ GW LTLE G S Sbjct: 29 RVFLRKPLAVVEAEERGSKLGRHLSLFDLLCIGIGGTVGSGVFVLCGLIAHEYAGPAVVLSWLTAGFGCVLSGMNYAEMSSRVPSAGSSYAYTYVALGELPAVVAGWCLTLEYGIS 144
BLAST of mRNA_C-tenellus_contig10931.1.1 vs. uniprot
Match: D0NIV1_PHYIT (Amino Acid-Polyamine-Organocation (APC) Family n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NIV1_PHYIT) HSP 1 Score: 137 bits (346), Expect = 5.210e-36 Identity = 72/121 (59.50%), Postives = 89/121 (73.55%), Query Frame = 1 Query: 82 ALLRKPMPV------VLEEVTQDKLERHLTLFDLVVIGVAGTIGSGMFALVGLIASSYAGPAGVISWTLAGLGCMLSGLSYAELSSMIPSEGGAYAYAYVALGELPAMLTGWLLTLEVGNS 426 A RKP+ V V E ++ER L LFDL++IG+ GT+GSG+FA GLIASSYAGPA +SW LAG+GC+LSGLS+ EL+ +IPS G YAYAY ALGELPA++ G+LLTLE G S Sbjct: 7 AFWRKPLHVETSSHSVQESDNAPEMERTLGLFDLIMIGIGGTVGSGVFATAGLIASSYAGPAATLSWLLAGIGCLLSGLSFMELACLIPSAGSTYAYAYHALGELPALIAGFLLTLEYGVS 127
BLAST of mRNA_C-tenellus_contig10931.1.1 vs. uniprot
Match: A0A8J5IHE5_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5IHE5_9STRA) HSP 1 Score: 135 bits (340), Expect = 3.140e-35 Identity = 70/121 (57.85%), Postives = 89/121 (73.55%), Query Frame = 1 Query: 82 ALLRKPMPV------VLEEVTQDKLERHLTLFDLVVIGVAGTIGSGMFALVGLIASSYAGPAGVISWTLAGLGCMLSGLSYAELSSMIPSEGGAYAYAYVALGELPAMLTGWLLTLEVGNS 426 A RKP+ + V + ++ER L LFDL++IG+ GT+GSG+FA GLIASSYAGPA +SW LAG+GC+LSGLS+ EL+ +IPS G YAYAY ALGELPA++ G+LLTLE G S Sbjct: 7 AFWRKPLRLETSSHSVQQSEDAPEMERTLGLFDLIMIGIGGTVGSGVFATAGLIASSYAGPAATLSWLLAGIGCLLSGLSFMELACLIPSAGSTYAYAYHALGELPALIAGFLLTLEYGVS 127
BLAST of mRNA_C-tenellus_contig10931.1.1 vs. uniprot
Match: A0A833TAT7_PHYIN (AA permease C-terminal domain-containing protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833TAT7_PHYIN) HSP 1 Score: 137 bits (346), Expect = 3.860e-35 Identity = 72/121 (59.50%), Postives = 89/121 (73.55%), Query Frame = 1 Query: 82 ALLRKPMPV------VLEEVTQDKLERHLTLFDLVVIGVAGTIGSGMFALVGLIASSYAGPAGVISWTLAGLGCMLSGLSYAELSSMIPSEGGAYAYAYVALGELPAMLTGWLLTLEVGNS 426 A RKP+ V V E ++ER L LFDL++IG+ GT+GSG+FA GLIASSYAGPA +SW LAG+GC+LSGLS+ EL+ +IPS G YAYAY ALGELPA++ G+LLTLE G S Sbjct: 7 AFWRKPLHVETSSHSVQESDNAPEMERTLGLFDLIMIGIGGTVGSGVFATAGLIASSYAGPAATLSWLLAGIGCLLSGLSFMELACLIPSAGSTYAYAYHALGELPALIAGFLLTLEYGVS 127
BLAST of mRNA_C-tenellus_contig10931.1.1 vs. uniprot
Match: A0A835ZA89_9STRA (Amino acid permease-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA89_9STRA) HSP 1 Score: 137 bits (345), Expect = 7.400e-35 Identity = 67/111 (60.36%), Postives = 86/111 (77.48%), Query Frame = 1 Query: 94 KPMPVVLEEVTQDKLERHLTLFDLVVIGVAGTIGSGMFALVGLIASSYAGPAGVISWTLAGLGCMLSGLSYAELSSMIPSEGGAYAYAYVALGELPAMLTGWLLTLEVGNS 426 KP+ V+ E + +LER L L+DLV IG+ GTIGSG+F + GLI AGPAGV SW +AGLGC+LSG+++AE+SS++PS G AYAYAYVALGELPA++ W L+LE G S Sbjct: 41 KPLRVIHAEESCQELERTLGLWDLVAIGIGGTIGSGVFVMCGLIGGEVAGPAGVFSWLVAGLGCLLSGVAFAEMSSLVPSAGSAYAYAYVALGELPAVVIAWCLSLEYGIS 151
BLAST of mRNA_C-tenellus_contig10931.1.1 vs. uniprot
Match: V9F4V2_PHYPR (AA_permease_C domain-containing protein n=9 Tax=Phytophthora TaxID=4783 RepID=V9F4V2_PHYPR) HSP 1 Score: 136 bits (343), Expect = 1.070e-34 Identity = 71/121 (58.68%), Postives = 89/121 (73.55%), Query Frame = 1 Query: 82 ALLRKPMPV------VLEEVTQDKLERHLTLFDLVVIGVAGTIGSGMFALVGLIASSYAGPAGVISWTLAGLGCMLSGLSYAELSSMIPSEGGAYAYAYVALGELPAMLTGWLLTLEVGNS 426 A RKP+ + V E ++ER L LFDL++IG+ GT+GSG+FA GLIASSYAGPA +SW LAG+GC+LSGLS+ EL+ +IPS G YAYAY ALGELPA++ G+LLTLE G S Sbjct: 7 AFWRKPLHLETSSHSVQESENAPEMERTLGLFDLIMIGIGGTVGSGVFATAGLIASSYAGPAATLSWLLAGIGCLLSGLSFMELACLIPSAGSTYAYAYHALGELPALVAGFLLTLEYGVS 127
BLAST of mRNA_C-tenellus_contig10931.1.1 vs. uniprot
Match: W2ZBC9_PHYPR (AA_permease_C domain-containing protein n=1 Tax=Phytophthora parasitica P10297 TaxID=1317064 RepID=W2ZBC9_PHYPR) HSP 1 Score: 136 bits (343), Expect = 1.070e-34 Identity = 71/121 (58.68%), Postives = 89/121 (73.55%), Query Frame = 1 Query: 82 ALLRKPMPV------VLEEVTQDKLERHLTLFDLVVIGVAGTIGSGMFALVGLIASSYAGPAGVISWTLAGLGCMLSGLSYAELSSMIPSEGGAYAYAYVALGELPAMLTGWLLTLEVGNS 426 A RKP+ + V E ++ER L LFDL++IG+ GT+GSG+FA GLIASSYAGPA +SW LAG+GC+LSGLS+ EL+ +IPS G YAYAY ALGELPA++ G+LLTLE G S Sbjct: 7 AFWRKPLHLETSSHSVQESENAPEMERTLGLFDLIMIGIGGTVGSGVFATAGLIASSYAGPAATLSWLLAGIGCLLSGLSFMELACLIPSAGSTYAYAYHALGELPALVAGFLLTLEYGVS 127
BLAST of mRNA_C-tenellus_contig10931.1.1 vs. uniprot
Match: A0A225WEL0_9STRA (Amino Acid-Polyamine-Organocation (APC) protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WEL0_9STRA) HSP 1 Score: 135 bits (340), Expect = 1.270e-34 Identity = 71/119 (59.66%), Postives = 91/119 (76.47%), Query Frame = 1 Query: 82 ALLRKPMPVVLEE--VTQDK--LERHLTLFDLVVIGVAGTIGSGMFALVGLIASSYAGPAGVISWTLAGLGCMLSGLSYAELSSMIPSEGGAYAYAYVALGELPAMLTGWLLTLEVGNS 426 A RKP+ + + V +D+ +ER L LFDL++IG+ GT+GSG+FA GLIASSYAGPA +SW LAG+GC+LSGLS+ EL+ +IPS G YAYAY ALGELPA++ G+LLTLE G S Sbjct: 7 AFWRKPLHLEMSSHSVQEDEPEMERTLGLFDLLMIGIGGTVGSGVFATAGLIASSYAGPAATLSWLLAGVGCLLSGLSFMELACLIPSAGSTYAYAYHALGELPALIAGFLLTLEYGVS 125
BLAST of mRNA_C-tenellus_contig10931.1.1 vs. uniprot
Match: A0A484DZC6_BRELC (AA_permease_C domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DZC6_BRELC) HSP 1 Score: 135 bits (341), Expect = 1.890e-34 Identity = 73/121 (60.33%), Postives = 89/121 (73.55%), Query Frame = 1 Query: 82 ALLRKPMPV------VLEEVTQDKLERHLTLFDLVVIGVAGTIGSGMFALVGLIASSYAGPAGVISWTLAGLGCMLSGLSYAELSSMIPSEGGAYAYAYVALGELPAMLTGWLLTLEVGNS 426 A RKP+ + V E +LER L LFDL++IG+ GT+GSG+FA GLIASSYAGPA +SW LAG GC+LSGLS+ ELS +IPS G +YAYAY ALGELPA++ G+LLTLE G S Sbjct: 7 AFWRKPLHLETLSHSVQEPKDAPELERTLGLFDLLMIGIGGTVGSGVFATSGLIASSYAGPAATLSWLLAGAGCLLSGLSFMELSCLIPSAGSSYAYAYHALGELPALIAGFLLTLEYGVS 127 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10931.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10931.1.1 >prot_C-tenellus_contig10931.1.1 ID=prot_C-tenellus_contig10931.1.1|Name=mRNA_C-tenellus_contig10931.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=142bp MGKFYYNTLSDNRMAASRRFDGIIGSRALLRKPMPVVLEEVTQDKLERHLback to top mRNA from alignment at C-tenellus_contig10931:3800..5180+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10931.1.1 ID=mRNA_C-tenellus_contig10931.1.1|Name=mRNA_C-tenellus_contig10931.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1381bp|location=Sequence derived from alignment at C-tenellus_contig10931:3800..5180+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10931:3800..5180+ >mRNA_C-tenellus_contig10931.1.1 ID=mRNA_C-tenellus_contig10931.1.1|Name=mRNA_C-tenellus_contig10931.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=426bp|location=Sequence derived from alignment at C-tenellus_contig10931:3800..5180+ (Choristocarpus tenellus KU2346)back to top |