mRNA_C-tenellus_contig10926.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10926.1.1 vs. uniprot
Match: A0A6H5KVF3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF3_9PHAE) HSP 1 Score: 265 bits (677), Expect = 4.020e-79 Identity = 154/342 (45.03%), Postives = 197/342 (57.60%), Query Frame = 1 Query: 223 GITTLLHR*YISSGDCGATSGACFCFN-GICFTTGASSFCDDLQVGGDPHLVGFKGQRFDVTGQDEGIYNLVHDGECNIINMRV-SALPGMPAITYITALGMILCGKDGNKHTVEIMVKDSHNLETSCPSDYV-CLADGALTVLLDSKE-IMGPGMFDTGNGVVVTAANIPGECHPFGFEKYWMAQQDKDENNAIHGRRLEEVFPMSEWLMRDTLRTNPRECDLYVKRA-AESDSLFDHQSEHTSFQIAFPHLSLRVNHGKINQIAMRDPTDTLDLPDHVAYQMNLAFRKIQLGDDPRGILGETVHPVLNESGAPIMEGPKTLRADEESYRVHCLLCSEFAQ 1233 G TL S G+ G G C C G S D + GDPH+ GF GQ+FD TG+D G Y+++ D N+ NMRV S + +P ITYIT L ++ DG +H++ I V D HNL++SCP+ CL DGAL VLLD E + PG G V V+AAN+PG C FGFEKYW + K NA GR L M EW++ D TN EC YV RA AE +F HQSEH SFQI P ++R++HG+++QIAMRDPTD DLPDH+ +QMN+A + +GILG+T P + G PIM G + +R EE YRV L +F Q Sbjct: 274 GTVTLGLNPTCSCGESGCPDGLICCEKKDYCDVFGDESV--DGVICGDPHMTGFLGQKFDFTGEDGGWYSVIADSNMNV-NMRVTSPVADLPEITYITGLSVLTTDTDGLEHSIVIEVIDPHNLDSSCPAGVSPCLGDGALVVLLDGVESLFAPGTVALGADVEVSAANLPGACRSFGFEKYW---ERKKLENARAGRLLRTTPSMGEWILGDPTATNMNECVEYVARAEAEEGGVFAHQSEHVSFQIVTPKATVRLSHGRLHQIAMRDPTDRFDLPDHLTWQMNMAIHHEDVSHAAKGILGQTFVPTRDADGKPIMTGLEAIRGSEEDYRVDGALGVDFVQ 609
BLAST of mRNA_C-tenellus_contig10926.1.1 vs. uniprot
Match: A0A6H5K7V7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7V7_9PHAE) HSP 1 Score: 249 bits (635), Expect = 8.520e-75 Identity = 136/296 (45.95%), Postives = 179/296 (60.47%), Query Frame = 1 Query: 340 DDLQVGGDPHLVGFKGQRFDVTGQDEGIYNLVHDGECNIINMRV-SALPGMPAITYITALGMILCGKDGNKHTVEIMVKDSHNLETSCP-SDYVCLADGALTVLLDSK-EIMGPGMFDTGNGVVVTAANIPGECHPFGFEKYWMAQQDKDENNAIHGRRLE---EVFPMSEWLMRDTLRTNPRECDLYVKRAAESDS--LFDHQSEHTSFQIAFPHLSLRVNHGKINQIAMRDPTDTLDLPDHVAYQMNLAFRKIQLGDDPRGILGETVHPVLNESGAPIMEGPKTLRADEESYRV 1203 DD GDPH+ GF GQ+FD GQD Y +V D +NMRV S +P P ITYIT LG+ +G H++ I V D H+L+++CP CLADGALTV LD ++ PG + G GV ++A N+PG C FGFEKYW + K GRRL ++ MS+W++ D TN EC YV A LF++ SEHTSFQI P ++R++HG+++Q+AMRDPTD D+PDH+ +QMNLAF + L D GILGET L+ +G PIMEG +R +E Y V Sbjct: 133 DDAGACGDPHMTGFLGQKFDFVGQDGEWYAVVSDMPDLEVNMRVTSPVPAEPEITYITGLGIKTRDIEGLDHSLVITVTDPHSLDSACPVQGSTCLADGALTVELDGDVALLSPGEAELGPGVAISAVNLPGACRSFGFEKYW---ERKKAEYVASGRRLNNDLQMQEMSDWILGDPTATNMAECTEYVLGATVDGQAGLFEYDSEHTSFQIVTPKGTIRLSHGRLHQLAMRDPTDRFDIPDHLTWQMNLAFDNVDLAVDATGILGETQQHTLDANGNPIMEGMAAIRGSQEDYLV 425
BLAST of mRNA_C-tenellus_contig10926.1.1 vs. uniprot
Match: A0A6H5JW46_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW46_9PHAE) HSP 1 Score: 246 bits (629), Expect = 1.420e-74 Identity = 132/286 (46.15%), Postives = 178/286 (62.24%), Query Frame = 1 Query: 358 GDPHLVGFKGQRFDVTGQDEGIYNLVHDGECNIINMRV-SALPGMPAITYITALGMILCGKDGNKHTVEIMVKDSHNLETSCPSDYV-CLADGALTVLLDSKE-IMGPGMFDTGNGVVVTAANIPGECHPFGFEKYWMAQQDKDENNAIHGRRLEEVFPMSEWLMRDTLRTNPRECDLYVKRA-AESDSLFDHQSEHTSFQIAFPHLSLRVNHGKINQIAMRDPTDTLDLPDHVAYQMNLAFRKIQLGDDPRGILGETVHPVLNESGAPIMEGPKTLRADEESYRV 1203 GDPH+ GF GQ+FD TG+D G Y L+ D +NMRV S +P +P ITYIT L ++ +G H++ I VK+ H++E++CP+ CLADG+L V+L+ KE + PG +GV+VTA N+PGEC FGFE YW + K NA HGR L E M +WL+ D TN EC YV +A ++ LF QSEH SFQI P ++R++HG+++QIA RDPT+ DLPDH +QMN+ ++ GILGET P + G IM G + +R EE YRV Sbjct: 89 GDPHMTGFLGQKFDFTGEDGGYYALISDFPNMHMNMRVTSPVPSLPEITYITGLSLLTTDANGEVHSIVIEVKNPHDIESACPAGVSPCLADGSLRVMLNGKEELSAPGSVALADGVIVTAVNLPGECRSFGFEHYW---ERKKLENARHGRHLGEQS-MGDWLLGDPTATNMDECMEYVAQAEGQAGGLFALQSEHASFQIVTPTATVRLSHGRLHQIATRDPTNRFDLPDHTTWQMNMGIDHNEVSYSATGILGETSTPTKDAYGQDIMTGMEAIRGSEEDYRV 370
BLAST of mRNA_C-tenellus_contig10926.1.1 vs. uniprot
Match: A0A6H5L5Y7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5Y7_9PHAE) HSP 1 Score: 234 bits (597), Expect = 1.910e-70 Identity = 132/298 (44.30%), Postives = 174/298 (58.39%), Query Frame = 1 Query: 346 LQVGGDPHLVGFKGQRFDVTGQDEGIYNLVHDGECNIINMRV----SALPGMPAITYITA---------LGMILCGKDGNKHTVEIMVKDSHNLETSCPSDYV-CLADGALTVLLDSKE-IMGPGMFDTGNGVVVTAANIPGECHPFGFEKYWMAQQDKDENNAIHGRRLEEVFPMSEWLMRDTLRTNPRECDLYVKRA-AESDSLFDHQSEHTSFQIAFPHLSLRVNHGKINQIAMRDPTDTLDLPDHVAYQMNLAFRKIQLGDDPRGILGETVHPVLNESGAPIMEGPKTLRADEE 1191 + G PH+ GF GQ+FD TG+D G Y+++ D N+ NMRV S P P + A L ++ DG+ H++ I V + H+L++SCP+ CLADGAL VLLD E + G G GV ++A N+PG C FGFEKYW + K A GR+L M EW++ D TN EC YV RA AE +F HQSEH SFQI P ++R++HG+++QIAMRDPTD DLPDH+ +QMNLA Q+ +GILGET P + SG PIM G + +R EE Sbjct: 5 FSLSGGPHMTGFLGQKFDFTGEDGGWYSIIADSNMNV-NMRVTSPSSTCPRSPTSQRLGAYSSAVLERRLSVLTTDADGSDHSIVIEVAEPHSLDSSCPAGVSPCLADGALRVLLDGDEALFAHGTVSLGLGVEISAVNLPGACRSFGFEKYW---EHKKLEYATGGRQLRTQPSMGEWILGDPTATNMDECVEYVARAEAEEGGMFAHQSEHASFQIVTPAATVRLSHGRLHQIAMRDPTDQYDLPDHLTWQMNLAVDHNQVSYAAKGILGETFVPTRDASGKPIMTGMEAIRGTEE 298
BLAST of mRNA_C-tenellus_contig10926.1.1 vs. uniprot
Match: A0A6H5JRC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRC1_9PHAE) HSP 1 Score: 223 bits (569), Expect = 1.320e-61 Identity = 130/293 (44.37%), Postives = 165/293 (56.31%), Query Frame = 1 Query: 343 DLQVGGDPHLVGFKGQRFDVTGQDEGIYNLVHDGECNIINMRVSA-LPGMPAITYITALGMILCGKDGNKHTVEIMVKDSHNLETSCPSDYV-CLADGALTVLLDSKE-IMGPGMFDTGNGVVVTAANIPGECHPFGFEKYWMAQQDKDENNAIHGRRLEEVFPMSEWLMRDTLRTNPRECDLYVKR---AAESDSLFDHQSEHTSFQIAFPHLSLRVNHGKINQIAMRDPTDTLDLPDHVAYQMNLAFRKIQLGDDPRGILGETVHPVLNESGAPIMEGPKTLRADEESYRV 1203 D GGDPH+ GF GQ+FD TG D Y L+ D +NMRV+A + P ITYIT L +I G +H++ I VKD HNL++ CP CLADG+L V+LD E + PG + V V+A NIPG C FGFEKYW ++ K E GR L M EW++ D TN EC YV R + LF HQSEHTSFQI P +R++HG+ +QIA L LPDHV +QMNLA + +G+LGET+ P SG +M G + +R EE Y V Sbjct: 593 DPTAGGDPHMTGFHGQKFDFTGNDGQWYCLISDLPSMHLNMRVTAPVSSRPDITYITGLSLITTDGGGQEHSIIISVKDPHNLDSDCPPGVSPCLADGSLIVVLDGNETLFAPGAVELAPDVKVSAVNIPGACRSFGFEKYW--ERKKLEYAQAGGRGLLTEQSMGEWILGDPTATNVEECTEYVARHVAGSVDGDLFAHQSEHTSFQIVTPTAVVRLSHGRRHQIA------ELGLPDHVTWQMNLAVDHNDVSLSAKGVLGETLIPTRAASGEYVMHGMEAIRGTEEDYHV 877
BLAST of mRNA_C-tenellus_contig10926.1.1 vs. uniprot
Match: A0A6H5L2W0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2W0_9PHAE) HSP 1 Score: 182 bits (463), Expect = 2.230e-51 Identity = 111/282 (39.36%), Postives = 154/282 (54.61%), Query Frame = 1 Query: 370 LVGFKGQRFDVTGQDEGIYNLVHDGECNIINMRVSAL-PGMPAITYITALGMILCGKDGNKHTVEIMVKDSHNLETSCPSDYV-CLADGALTVLLDSKE-IMGPGMFDTGNGVVVTAANIPGECHPFGFEKYWMAQQDKDENNAIHGRRLE---EVFPMSEWLMRDTLRTNPRECDLYVKRAAESD--SLFDHQSEHTSFQIAFPHLSLRVNHGKINQIAMRDPTDTLDLPDHVAYQMNLAFRKIQLGDDPRGILGETVHPVLNESGAPIMEGPKTLRADEE 1191 + GF+GQ+FD TGQD G Y++ D +NMR +L P +P ITYIT LG+ +G HT+ I V D H+L+++CP CLADGALTV LD K ++ PG G V ++A N+PG C FGFE+YW + K + A GRRL ++ MS+W++ D TN EC YV A + LF+H EHTSFQI P ++R MNLA +I + + GILGET P L+ +G+PIM+G ++R ++ Sbjct: 1 MTGFRGQKFDFTGQDGGWYSVHSDMPRIHLNMRARSLVPSVPEITYITGLGITTTDANGLDHTIVITVTDPHSLDSACPVGVSPCLADGALTVQLDGKHALLAPGEVLFGPQVAISAVNLPGACRSFGFEEYW---ERKKQEYARGGRRLPSSTQMQAMSDWILGDPTATNMAECTEYVVEATRNGLGGLFEHDLEHTSFQILTPMGTIRRAMAAFTSFPC----------------MNLAIDRIDVSPNATGILGETQKPTLDANGSPIMQGMASIRGAQD 263
BLAST of mRNA_C-tenellus_contig10926.1.1 vs. uniprot
Match: A0A6H5KYD0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYD0_9PHAE) HSP 1 Score: 121 bits (303), Expect = 1.290e-27 Identity = 89/305 (29.18%), Postives = 146/305 (47.87%), Query Frame = 1 Query: 340 DDLQVGGDPHLVGFKGQRFDVTGQDEGIYNLVHDGECNIINMRVSALPGMPAITYITALGMILCGKDGNKHTVEIMVKDSHNLETSCPSDYVCLADGALTVLLDSKE---IMGP--GMFDTGNGVVVTAANIPGECHPFGFEKYWMAQQDKDENNAIHGRRLEEVFPMSEWLMRDTLRTNPRECDLYVKRAAESDSLFDHQSEHTSFQIAFPHLSLRVNHG-KINQIAMRDPTDTLDLPDHVAYQMNLAFRKIQLGDDPRGILGETVHPVLNESGAPIMEGPKTLRADEESYRVHCLLCSEFAQL 1236 DD QV GD H+VG GQ D G+D G Y L+ + E + N RV+A T G+ + +G VE+ + E + CLA+GAL +L+D E + P + G +VV++AN+P EC PFG ++ W AQ N+A R L P ++W++ P C L+ + S L QS ++ +++RV+ G + + + +P+ +Q ++AF +++ + G+LG+T V+++ G PI G + LR E+ RV L +F Q+ Sbjct: 3 DDPQVSGDSHMVGLLGQEIDWYGEDSGWYCLLVNSEFQV-NARVTAPMPDEFPTRQLVSGVSIRSAEGPSLVVEVKNPITTETEGCSSTSAPCLAEGALRILVDGDESHALQSPVENLVLPGGDLVVSSANLPAECRPFGGDRIWAAQFAA-MNDASGRRSLRGHTPFADWVLEADTMAAPGWCALFAREQRLS-GLSSVQSNRAILRVETGGVTVRVDVGVNYQDSVLSSDGNAVLVPELDFWQTDIAFEELRPSGELGGMLGDTARYVIDDDGKPITSGMEALRGPVETCRVSGPLGVDFEQM 304 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10926.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10926.1.1 >prot_C-tenellus_contig10926.1.1 ID=prot_C-tenellus_contig10926.1.1|Name=mRNA_C-tenellus_contig10926.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=262bp MRVSALPGMPAITYITALGMILCGKDGNKHTVEIMVKDSHNLETSCPSDYback to top mRNA from alignment at C-tenellus_contig10926:516..3776+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10926.1.1 ID=mRNA_C-tenellus_contig10926.1.1|Name=mRNA_C-tenellus_contig10926.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3261bp|location=Sequence derived from alignment at C-tenellus_contig10926:516..3776+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10926:516..3776+ >mRNA_C-tenellus_contig10926.1.1 ID=mRNA_C-tenellus_contig10926.1.1|Name=mRNA_C-tenellus_contig10926.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=786bp|location=Sequence derived from alignment at C-tenellus_contig10926:516..3776+ (Choristocarpus tenellus KU2346)back to top |