mRNA_C-tenellus_contig10913.1.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig10913.1.1
Unique NamemRNA_C-tenellus_contig10913.1.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig10913.1.1 vs. uniprot
Match: D8LCY7_ECTSI (Long-chain-fatty-acid--CoA ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCY7_ECTSI)

HSP 1 Score: 378 bits (970), Expect = 1.240e-124
Identity = 186/261 (71.26%), Postives = 207/261 (79.31%), Query Frame = 1
Query:   19 YGQTETTAGATMTHHGDFSTGHVGGPFSCTEIRLADVPEMGYLHTDSWHGDDPRAGGKGGIPCRGRGEVCFRGSNIFHGYYKMDEKTKETFDHEGWLYSGDIGLWNADGALKLIDRKKNIFKLSQGEYIAPEKIENVHTLSPLVAQSFVHGDSLQSSLVAVIVPDEEGVKSWAVASGISGSTSFAELCANPQLKAAVMEELETVSERAKLQRFEMASLAIHLEPSLFSVDNNMLTPTFKLKRDVAREAYGEVIGHLYSTIE 801
            YGQTETTAG+TMT  GDFS GHVGGPFSCTEI L DVPEMGY HTD+WHG DPR  G GG  C GRGE+CFRG N+F GYYK DEKT+E FD  GWL SGDIG+WN DGALK+IDRKKNIFKLSQGEY+APEK+EN+HT SPLVAQS+VHGDSL+SSLVA+IVPD +    WA A+G  G+ S  ELC NP LKA VM ELETV+ERA LQRFE    AIHLEP  FS  N +LTPTFKLKR  A EAY +VI  LY+ +E
Sbjct:  393 YGQTETTAGSTMTQSGDFSVGHVGGPFSCTEICLKDVPEMGYRHTDTWHGGDPRDAGGGGEACEGRGEICFRGCNVFVGYYKDDEKTREAFDENGWLMSGDIGMWNLDGALKIIDRKKNIFKLSQGEYVAPEKLENIHTQSPLVAQSYVHGDSLRSSLVAIIVPDPDAAAGWADANGC-GNASMVELCRNPGLKADVMLELETVAERAGLQRFEKVR-AIHLEPDPFSAQNGLLTPTFKLKRAQALEAYSKVIAALYAGLE 651          
BLAST of mRNA_C-tenellus_contig10913.1.1 vs. uniprot
Match: A0A835ZFW5_9STRA (Long chain acyl-CoA synthetase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFW5_9STRA)

HSP 1 Score: 346 bits (887), Expect = 1.310e-111
Identity = 171/272 (62.87%), Postives = 202/272 (74.26%), Query Frame = 1
Query:    7 VIYSYGQTETTAGATMTHHGDFSTGHVGGPFSCTEIRLADVPEMGYLHTDSWHGDDPRAGGKGGIPCRGRGEVCFRGSNIFHGYYKMDEKTKETFDHEGWLYSGDIGLWNADGALKLIDRKKNIFKLSQGEYIAPEKIENVHTLSPLVAQSFVHGDSLQSSLVAVIVPDEEGVKSW-------AVASGISGSTSFAELCANPQLKAAVMEELETVSERAKLQRFEMASLAIHLEPSLFSVDNNMLTPTFKLKRDVAREAYGEVIGHLYSTIE 801
            +I  YGQTET AGAT+T  GDFS GHVGGPF CTEI L DVPEMGYLHTDSWHG DPR GG GG PC GRGE+CFRG+N+F GYYK  EKT E  D +GWL+SGDIGLW ADGAL++IDRKKNIFKLSQGEYIAPEKIENVH  SPLVAQSFV+GDSL+S+LVAV+VPD + V +W       A A+  + +     LCA+  L+ AVME+L   + RA LQRFE     +HLEP+ F+ +N +LTPT KLKR  A   Y  V+  LY+ ++
Sbjct:  432 LIEGYGQTETCAGATITMPGDFSAGHVGGPFPCTEICLMDVPEMGYLHTDSWHGGDPREGGGGGEPCAGRGEICFRGTNVFAGYYKDPEKTAEAIDADGWLHSGDIGLWTADGALRIIDRKKNIFKLSQGEYIAPEKIENVHVQSPLVAQSFVYGDSLRSALVAVVVPDADAVVAWHAARHGSAAAAASNAAVDLEALCASAALREAVMEQLAAAAARAGLQRFERVR-RVHLEPAPFTPENGLLTPTMKLKRAEAAAHYASVLDELYAAVD 702          
BLAST of mRNA_C-tenellus_contig10913.1.1 vs. uniprot
Match: A0A7S3Y2U0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y2U0_HETAK)

HSP 1 Score: 288 bits (738), Expect = 4.370e-93
Identity = 141/263 (53.61%), Postives = 192/263 (73.00%), Query Frame = 1
Query:   10 IYSYGQTETTAGATMTHHGDFSTGHVGGPFSCTEIRLADVPEMGYLHTDSWHGDDPRAGGKGGIPCRGRGEVCFRGSNIFHGYYKMDEKTKETFDHEGWLYSGDIGLWNADGALKLIDRKKNIFKLSQGEYIAPEKIENVHTLSPLVAQSFVHGDSLQSSLVAVIVPDEEGVKSWAVASGISGSTSFAELCANPQLKAAVMEELETVSERAKLQRFEMASLAIHLEPSLFSVDNNMLTPTFKLKRDVAREAYGEVIGHLYSTI 798
            I  YGQTE+T  AT+        G+VGGP    EI L  VP+MGYLHTD+ HG+D       G PC GRGE+C RG N+F GYYK ++KTKET D +GWL++GDIG+W  +GALK++DRKKN+FKL+QGEY+APEK+EN++  S LV Q FV+GDSLQ+SLVAV+VPDE+G+ +WA A G++G    A+LCA P+L+A V+ ++  V + +KL  FE+A  A+HL+P  FS++N ++T TFKLKRDVA++ Y   I  +Y ++
Sbjct:  134 IEGYGQTESTGAATLQAMYTTDAGNVGGPIVSCEIALQSVPDMGYLHTDAAHGEDR------GTPCEGRGEICLRGHNVFMGYYKDEKKTKETIDADGWLHTGDIGIWLPNGALKIVDRKKNLFKLAQGEYVAPEKLENIYGKSSLVGQVFVYGDSLQASLVAVVVPDEQGLAAWAQAKGLAGDA--AKLCALPELRADVLADILRVGKESKLHGFEIAR-AVHLDPEPFSMENGLITTTFKLKRDVAKKHYRLQIDAMYDSL 387          
BLAST of mRNA_C-tenellus_contig10913.1.1 vs. uniprot
Match: A0A7S1V9E3_9STRA (Long-chain-fatty-acid--CoA ligase n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V9E3_9STRA)

HSP 1 Score: 290 bits (741), Expect = 1.850e-91
Identity = 148/265 (55.85%), Postives = 182/265 (68.68%), Query Frame = 1
Query:    7 VIYSYGQTETTAGATMTHHGDF-STGHVGGPFSCTEIRLADVPEMGYLHTDSWHGDDPRAGGKGGIPCRGRGEVCFRGSNIFHGYYKMDEKTKETFDHEGWLYSGDIGLWNADGALKLIDRKKNIFKLSQGEYIAPEKIENVHTLSPLVAQSFVHGDSLQSSLVAVIVPDEEGVKSWAVASGISGSTSFAELCANPQLKAAVMEELETVSERAKLQRFEMASLAIHLEPSLFSVDNNMLTPTFKLKRDVAREAYGEVIGHLYSTI 798
            V+  YGQTE  A  T++H  DF S GHVGGP   TE+ L DVPEMGYLHTD+ H          G PC+GRGE+  RG N+F GYYK + KTKET D +GWL SGDIGLW   G L++IDRKKNIFKLSQGEY+APEKIEN+   SPL+ Q+FV+GDS Q  LVAVIVPDEE V +WA      G  SFA+LC   QLK A+++E + +S  + L  FE    AIHLE  LFSV+N ++TPTFKLKR   R+ + + I  +YS++
Sbjct:  297 VVEGYGQTEGCAAGTISHPDDFASVGHVGGPTGATEVMLVDVPEMGYLHTDTDHR---------GQPCQGRGEIWIRGPNVFKGYYKDEVKTKETLDEDGWLKSGDIGLWTMSGCLQIIDRKKNIFKLSQGEYVAPEKIENILIGSPLIGQAFVYGDSFQHCLVAVIVPDEEPVAAWATKQTELGPVSFAQLCKTTQLKDAILKEAKRLSRESGLTGFETVR-AIHLESDLFSVENGLVTPTFKLKRQQLRDRFAKEIADMYSSL 551          
BLAST of mRNA_C-tenellus_contig10913.1.1 vs. uniprot
Match: W7TAS6_9STRA (Long-chain-fatty-acid--CoA ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TAS6_9STRA)

HSP 1 Score: 287 bits (734), Expect = 4.900e-89
Identity = 145/262 (55.34%), Postives = 183/262 (69.85%), Query Frame = 1
Query:   19 YGQTETTAGATMTHHGDFSTGHVGGPFSCTEIRLADVPEMGYLHTDSWHGDDPRAGG---KGGIPCRGRGEVCFRGSNIFHGYYKMDEKTKETFDHEGWLYSGDIGLWNADGALKLIDRKKNIFKLSQGEYIAPEKIENVHTLSPLVAQSFVHGDSLQSSLVAVIVPDEEGVKSWAVASGISGSTSFAELCANPQLKAAVMEELETVSERAKLQRFEMASLAIHLEPSLFSVDNNMLTPTFKLKRDVAREAYGEVIGHLYST 795
            YGQTETTA  ++T  GD++TGHVGG    +E+RL DVPEMGYLHTD  HG   R GG   K   PC GRGE+C RG +IF GYYK  +KT ET D +GWL+SGD+G+W  +G L +IDRKKNIFKL+QGEY+A EKIENV   S ++AQ+FV+GDSL+S LVA++VPD E V+ WA    +    SFAELC    LK  +++E+E  S+RA L  FE+   AI+LE   F+  N +LTPT KLKR  AR+ Y  +I  LY+T
Sbjct:  418 YGQTETTAMTSLTFPGDWTTGHVGGVAPVSEVRLVDVPEMGYLHTDRQHGSAGRGGGAFGKAAQPCIGRGEICVRGPHIFKGYYKQPDKTAETIDAQGWLHSGDVGMWTPEGRLVIIDRKKNIFKLAQGEYVAAEKIENVLMQSEMIAQAFVYGDSLKSELVAIVVPDAEAVQDWARQESLPVDHSFAELCRQSLLKEKILDEIEVQSKRAGLHGFEIPK-AIYLESEPFTGANGLLTPTQKLKRMQARDRYSTIIQELYAT 678          
BLAST of mRNA_C-tenellus_contig10913.1.1 vs. uniprot
Match: A0A7S2UI66_9STRA (Long-chain-fatty-acid--CoA ligase n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UI66_9STRA)

HSP 1 Score: 283 bits (724), Expect = 1.140e-87
Identity = 145/266 (54.51%), Postives = 183/266 (68.80%), Query Frame = 1
Query:    7 VIYSYGQTETTAGATMTHHGDF-STGHVGGPFSCTEIRLADVPEMGYLHTDSWHGDDPRAGGKGGIPCRGRGEVCFRGSNIFHGYYKMDEKTKETFDHEGWLYSGDIGLWNADGALKLIDRKKNIFKLSQGEYIAPEKIENVHTLSPLVAQSFVHGDSLQSSLVAVIVPDEEGVKSWAVASGIS-GSTSFAELCANPQLKAAVMEELETVSERAKLQRFEMASLAIHLEPSLFSVDNNMLTPTFKLKRDVAREAYGEVIGHLYSTI 798
            V+  YGQTE TAGAT+ H  D  S GHVGGP  CTE+ L DVPEMGYLHTD  H D P         CRGRGE+  RG N+F GYYK  EKTKE  D EGWL+SGDIGLW   G L++IDRKK IFKL+QGEY++ EK+EN+   SPL  Q FV+GDSLQS+LVA++VPDEE V+SWA     +    SF +LC + +LK  + +++  +S+ A LQ FE    AI+LEP  FSV++ ++TPTFKLKR   R+ Y + I  LY+++
Sbjct:  415 VVEGYGQTEGTAGATVGHIEDMGSNGHVGGPTPCTEVVLLDVPEMGYLHTDRMHRDQP---------CRGRGEILIRGPNVFAGYYKEPEKTKEAIDEEGWLHSGDIGLWTLQGQLQIIDRKKEIFKLAQGEYVSAEKVENIVIRSPLFGQCFVYGDSLQSALVAIVVPDEEPVRSWAANHDSNLAKASFPDLCKSERLKVEIQKQIHNLSKAAGLQGFETVR-AIYLEPLPFSVEHGLVTPTFKLKRQQLRDYYEKNIAQLYASM 670          
BLAST of mRNA_C-tenellus_contig10913.1.1 vs. uniprot
Match: A0A7S2MGH8_9STRA (Long-chain-fatty-acid--CoA ligase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MGH8_9STRA)

HSP 1 Score: 283 bits (724), Expect = 1.160e-87
Identity = 143/264 (54.17%), Postives = 184/264 (69.70%), Query Frame = 1
Query:    7 VIYSYGQTETTAGATMTHHGDF-STGHVGGPFSCTEIRLADVPEMGYLHTDSWHGDDPRAGGKGGIPCRGRGEVCFRGSNIFHGYYKMDEKTKETFDHEGWLYSGDIGLWNADGALKLIDRKKNIFKLSQGEYIAPEKIENVHTLSPLVAQSFVHGDSLQSSLVAVIVPDEEGVKSWAVASGIS-GSTSFAELCANPQLKAAVMEELETVSERAKLQRFEMASLAIHLEPSLFSVDNNMLTPTFKLKRDVAREAYGEVIGHLYS 792
            V+  YGQTE TA AT++H  D  S GHVGGP +  EI L DVPEMGYLHTD+ H          G PCRGRGE+C RG N+F GYYK +EKT+ET D EGWL+SGD+GLW  DG L++IDRKKNIFKL+ GEY+A EKIEN+   S L+ Q FVHGDS Q++LV +IVPDEE V+ WA     S  + SFA+LC   +LK  +M++++T++++  LQ FE    AIH+   LF+ +N ++TPTFKLKR   RE + + I  +YS
Sbjct:  416 VLEGYGQTEGTAAATISHPDDMTSVGHVGGPTNVVEIVLIDVPEMGYLHTDTSHQ---------GKPCRGRGEICIRGPNVFKGYYKDEEKTRETIDEEGWLHSGDVGLWTPDGQLRIIDRKKNIFKLANGEYVAAEKIENILMQSLLIGQCFVHGDSYQTALVGIIVPDEEVVRGWATEKDASLANASFAQLCEMDELKRGIMDDIKTLTKKNGLQGFETVR-AIHISSELFTPENALVTPTFKLKRPQLREHFKKPIDEMYS 669          
BLAST of mRNA_C-tenellus_contig10913.1.1 vs. uniprot
Match: A0A7S2SDD9_9STRA (Long-chain-fatty-acid--CoA ligase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SDD9_9STRA)

HSP 1 Score: 282 bits (722), Expect = 2.160e-87
Identity = 152/265 (57.36%), Postives = 178/265 (67.17%), Query Frame = 1
Query:    7 VIYSYGQTETTAGATMTHHGDFSTGHVGGPFSCTEIRLADVPEMGYLHTDSWHGDDPRAGGKGGIPCRGRGEVCFRGSNIFHGYYKMDEKTKETFDHEGWLYSGDIGLWNADGALKLIDRKKNIFKLSQGEYIAPEKIENVHTLSPLVAQSFVHGDSLQSSLVAVIVPDEEGVKSWAVASGISGSTSFAELCANP--QLKAAVMEELETVSERAKLQRFEMASLAIHLEPSLFSVDNNMLTPTFKLKRDVAREAYGEVIGHLYST 795
            V   YGQTE  A AT+T  GDFS+GHVG P  C EI+L DVP+MGY HTD+WHG D     + G+PC GRGE+ +RG   F GYYKM EKT ET D +GWLYSGDIGLW   G LK+IDRKKNIFKL+QGEY+A EKIENV T SPL+ Q+FV+GDSLQS LVAVIVPDEE     A   G   + + A  CA P  +L  A+ EE+ T S  AKL  FE     I LEP+ FSV+  +LTPTFK+KR      Y   I  LY+T
Sbjct:  409 VFEGYGQTEGCAAATITAPGDFSSGHVGPPVPCVEIKLIDVPDMGYRHTDTWHGGD-----QDGMPCVGRGEIVYRGPVAFTGYYKMPEKTAETIDKDGWLYSGDIGLWTLSGNLKIIDRKKNIFKLAQGEYVAAEKIENVLTTSPLIGQAFVYGDSLQSYLVAVIVPDEETA---AARFGQGDTFNLAAACAAPGSELWQAITEEVATRSSEAKLAGFETVRKFI-LEPAPFSVEEGLLTPTFKIKRQAVEAKYKGAIDALYAT 664          
BLAST of mRNA_C-tenellus_contig10913.1.1 vs. uniprot
Match: A0A7S4C7T2_9EUGL (Long-chain-fatty-acid--CoA ligase n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4C7T2_9EUGL)

HSP 1 Score: 283 bits (724), Expect = 3.020e-87
Identity = 143/265 (53.96%), Postives = 188/265 (70.94%), Query Frame = 1
Query:    7 VIYSYGQTETTAGATMTHHGDFSTGHVGGPFSCTEIRLADVPEMGYLHTDSWHGDDPRAGGKGGIPCRGRGEVCFRGSNIFHGYYKMDEKTKETFDHEGWLYSGDIGLWNADGALKLIDRKKNIFKLSQGEYIAPEKIENVHTLSPLVAQSFVHGDSLQSSLVAVIVPDEEGVKSWAVASGISGSTSFAELCANPQLKAAVMEELETVSERAKLQRFEMASLAIHLEPSLFSVDNNMLTPTFKLKRDVAREAYGEVIGHLYSTIE 801
            V+  YGQTE    +T+   GD +TG+VG P +C  IRL  VP+MGYL TD+ HG D  A G  G+PC+GRGE+  +GSN+F GYYKM EKT+ET D +GW++SGDIG+W   G LK++DRKKNIFKL+QGEYIAPEKIENV+    +VAQSFV+GDS Q  LVA++VPD E + ++  A  +   T  A LC NP    AV  E++T  + AKL  FE A+  I+L+P+ FSVDN++LTPTFKLKRD+A++ Y   I  +Y ++E
Sbjct:  449 VLEGYGQTEVAGASTLQFLGDQTTGNVGAPLACNSIRLVSVPDMGYLVTDTMHGKD-EARGVPGMPCKGRGEIWTKGSNVFLGYYKMPEKTEETLDEDGWVHSGDIGVWTEKGQLKIVDRKKNIFKLAQGEYIAPEKIENVYGKVDIVAQSFVYGDSFQHQLVAIVVPDLEAIPTFCKAHDLPVDTPEA-LCKNPDFIKAVHVEMDTARKEAKLFGFEHAA-KIYLDPTPFSVDNDLLTPTFKLKRDIAKKYYQAQIDEMYDSLE 710          
BLAST of mRNA_C-tenellus_contig10913.1.1 vs. uniprot
Match: A0A7S1VYZ7_9STRA (Long-chain-fatty-acid--CoA ligase (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1VYZ7_9STRA)

HSP 1 Score: 280 bits (716), Expect = 1.820e-86
Identity = 141/266 (53.01%), Postives = 184/266 (69.17%), Query Frame = 1
Query:    7 VIYSYGQTETTAGATMTHHGDF-STGHVGGPFSCTEIRLADVPEMGYLHTDSWHGDDPRAGGKGGIPCRGRGEVCFRGSNIFHGYYKMDEKTKETFDHEGWLYSGDIGLWNADGALKLIDRKKNIFKLSQGEYIAPEKIENVHTLSPLVAQSFVHGDSLQSSLVAVIVPDEEGVKSWAVASGIS-GSTSFAELCANPQLKAAVMEELETVSERAKLQRFEMASLAIHLEPSLFSVDNNMLTPTFKLKRDVAREAYGEVIGHLYSTI 798
            ++  YGQTE TA AT+    DF S GHVGGP +  EI L DVPEMGYLHTD+ H          G PCRGRGE+C RG N+F GYYK +EKT+ET D EGWL+SGD+GLW  +G L++IDRKKNIFKL+ GEY+A EKIENV   S  + Q FVHGDS Q++LV +IVPDEE  ++WAV    S  + SFAELC   +LK+ +M++++++S++  L  FE    A HL P LF+ +N ++TPTFKLKR   RE + + I  +Y+ +
Sbjct:  424 IMEGYGQTEGTAAATIGDKDDFASIGHVGGPTAAVEIVLMDVPEMGYLHTDTSHQ---------GQPCRGRGEICVRGPNVFKGYYKDEEKTRETIDEEGWLHSGDVGLWTLNGQLRIIDRKKNIFKLANGEYVAAEKIENVLVQSLFIGQCFVHGDSYQTTLVGIIVPDEEVTRAWAVQKDASLANASFAELCGMEELKSKIMQDIKSLSKKCGLHGFETVR-AFHLSPELFAPENGLVTPTFKLKRPQLREHFQKNIDEMYAKL 679          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10913.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCY7_ECTSI1.240e-12471.26Long-chain-fatty-acid--CoA ligase n=1 Tax=Ectocarp... [more]
A0A835ZFW5_9STRA1.310e-11162.87Long chain acyl-CoA synthetase n=1 Tax=Tribonema m... [more]
A0A7S3Y2U0_HETAK4.370e-9353.61Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S1V9E3_9STRA1.850e-9155.85Long-chain-fatty-acid--CoA ligase n=1 Tax=Grammato... [more]
W7TAS6_9STRA4.900e-8955.34Long-chain-fatty-acid--CoA ligase n=2 Tax=Monodops... [more]
A0A7S2UI66_9STRA1.140e-8754.51Long-chain-fatty-acid--CoA ligase n=1 Tax=Attheya ... [more]
A0A7S2MGH8_9STRA1.160e-8754.17Long-chain-fatty-acid--CoA ligase n=1 Tax=Helicoth... [more]
A0A7S2SDD9_9STRA2.160e-8757.36Long-chain-fatty-acid--CoA ligase n=1 Tax=Rhizochr... [more]
A0A7S4C7T2_9EUGL3.020e-8753.96Long-chain-fatty-acid--CoA ligase n=1 Tax=Eutrepti... [more]
A0A7S1VYZ7_9STRA1.820e-8653.01Long-chain-fatty-acid--CoA ligase (Fragment) n=1 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig10913contigC-tenellus_contig10913:514..5052 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog35128.Thaps29867
PFAMsAMP-binding
Model size801
Max annot lvl2836|Bacillariophyta
KEGG rclassRC00004,RC00014
KEGG koko:K01897
KEGG TC4.C.1.1
KEGG ReactionR01280
KEGG Pathwayko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920
KEGG ModuleM00086
Hectar predicted targeting categoryother localisation
Exons6
Evalue7.45e-87
EggNOG OGsCOG1022@1|root,KOG1256@2759|Eukaryota,2XERM@2836|Bacillariophyta
Ec32 ortholog descriptionlong chain acyl-coA synthetase
Ec32 orthologEc-01_001560.1
EC6.2.1.3
DescriptionAMP-binding enzyme
Cds size801
COG categoryI
BRITEko00000,ko00001,ko00002,ko01000,ko01004,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig10913.1.1prot_C-tenellus_contig10913.1.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig10913 514..5052 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789154.6149287-CDS-C-tenellus_contig10913:513..7351680789154.6149287-CDS-C-tenellus_contig10913:513..735Choristocarpus tenellus KU2346CDSC-tenellus_contig10913 514..735 +
1680789154.6281989-CDS-C-tenellus_contig10913:1129..12681680789154.6281989-CDS-C-tenellus_contig10913:1129..1268Choristocarpus tenellus KU2346CDSC-tenellus_contig10913 1130..1268 +
1680789154.6387148-CDS-C-tenellus_contig10913:1922..19541680789154.6387148-CDS-C-tenellus_contig10913:1922..1954Choristocarpus tenellus KU2346CDSC-tenellus_contig10913 1923..1954 +
1680789154.6479824-CDS-C-tenellus_contig10913:2513..26771680789154.6479824-CDS-C-tenellus_contig10913:2513..2677Choristocarpus tenellus KU2346CDSC-tenellus_contig10913 2514..2677 +
1680789154.6582425-CDS-C-tenellus_contig10913:3772..38871680789154.6582425-CDS-C-tenellus_contig10913:3772..3887Choristocarpus tenellus KU2346CDSC-tenellus_contig10913 3773..3887 +
1680789154.674423-CDS-C-tenellus_contig10913:4923..50521680789154.674423-CDS-C-tenellus_contig10913:4923..5052Choristocarpus tenellus KU2346CDSC-tenellus_contig10913 4924..5052 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig10913.1.1

>prot_C-tenellus_contig10913.1.1 ID=prot_C-tenellus_contig10913.1.1|Name=mRNA_C-tenellus_contig10913.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=267bp
FFVIYSYGQTETTAGATMTHHGDFSTGHVGGPFSCTEIRLADVPEMGYLH
TDSWHGDDPRAGGKGGIPCRGRGEVCFRGSNIFHGYYKMDEKTKETFDHE
GWLYSGDIGLWNADGALKLIDRKKNIFKLSQGEYIAPEKIENVHTLSPLV
AQSFVHGDSLQSSLVAVIVPDEEGVKSWAVASGISGSTSFAELCANPQLK
AAVMEELETVSERAKLQRFEMASLAIHLEPSLFSVDNNMLTPTFKLKRDV
AREAYGEVIGHLYSTIE
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mRNA from alignment at C-tenellus_contig10913:514..5052+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig10913.1.1 ID=mRNA_C-tenellus_contig10913.1.1|Name=mRNA_C-tenellus_contig10913.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=4539bp|location=Sequence derived from alignment at C-tenellus_contig10913:514..5052+ (Choristocarpus tenellus KU2346)
TTTTTTGTGATCTACAGTTACGGGCAGACTGAGACCACTGCTGGGGCAAC CATGACCCATCACGGAGATTTTTCAACTGGACACGTGGGGGGACCGTTCA GCTGTACCGAGATTCGATTGGCCGACGTTCCAGAGATGGGATACCTGCAC ACTGACTCTTGGCATGGGGATGACCCCCGGGCAGGGGGCAAGGGGGGCAT ACCTTGCCGTGGGAGGGGAGAGGTTAGTTAAGGATGCATTTTTTTTTTTT GGCTCTCAGCTTTAGGTGATGTCATCTATGCCTTCCTGTCCTCGATAATA TTAACAATGATAGTAACAGTAATAGTAACAATAATAATAATAATAGTAAC AATGATAATAACAATGATAGTAACAACATTGGTCCTTAGGGCCGAGGGAA CAAAGGAAGGGGAAGTCCCCATCATTGCTTTTGTTTGCATCATTGTAGCA TTGTATCATTGTACTTATACAGTGTGTTGTGGTGCTGTTACTGAACTGAT ACAGTGTGTTAACATCCATGTACTTCTCGCCTGTGTGTGTGTGTGTGTGT GCTTCACTGAAATAACTGTATACGCTACACCTATGTAACTGTAATATACC CTATGTAACTTCTCAGGTGTGCTTCCGAGGGAGTAATATATTCCATGGGT ACTACAAGATGGATGAGAAGACAAAGGAGACCTTTGATCACGAGGGCTGG TTGTACTCAGGGGATATTGGTCTCTGGAATGCAGATGGCGCCCTCAAGCT CATTGGTGAGACAGTTCACTTCACACACACACACACACACACACTGGCTG CCACTGGTGTGGTAAATGTCAGTGTTGGTATTTACCCCCCTAGTTTCCAG AAACTACTAACAAGTTGAATCTAAATGTCCATGGACCTCCACCTCTCTCT CTCCTTCCACACATTGTAATTCTTGGTAGGGTACTGAATTGATTTGCATA TTGTTCTTGGAACCTAGGTCAATGCATGTATATGGATATATATATATATG GATAGATAGGAGAGGAAGATACTCATAGATACAGAGATCGAAGACCTGGT TTGTTGGAGGTTTGTAATGGTTGAGATTCCTTATACGTTTGTTTGCAACC TGAGGGTGCAAAGTAGTTTTTCATAATATGCCATCAGGCGGGTTTTTTTA GTGCTATTGGTGTCTGTCAGTATGCTGCATCAGCAGGATCATTCCTAAGC AAACAACGGCTAGAGCCTCGGTAGTGCAACACAGCACTTTACCAGCTCAC CTTTTGAATCCTCCCTCACCCCCCTTCCCCACGCTGACCTCTGTTGCCTT TTGCCCCCACATTGTTTATGTGTTGTCCAAATTGTGTGATGTGTGATGTG TGTGTGTGTGTGTGGCGTGTGCATGTCAAATGGTTTAATTTTTTTTTTGG GAACAAAAGACCGAAAGAAGAACATCTTCAAACTTTCTCAGGTGAAAAAC AGAAAAATATTGATAAGGTGCAGAGGCCAATTTTGTGTGGGGTTAGGGTT AAAAACAGTACAGGACGAAACTGTGAACTGTTTTTATTTTTTTTATTTTG AAGACTGACCTCTACAGTGTGAAACTGGTCACTGTCTCGGATCATTTTGC GATCAACTTCATAGTGTTTTTATTCCAGAAAGACCACCGCTTTTGTCTAT GTATGTATGTTTTTAAAGAGATATTTTTTATAGCCGGTGGAAATGAAGGA TCTGCCGGATCAGGCGACGTCTGTCCTCTTCGGTTGTATACAACCATCCC CTGTAAAAAACTTCAAAAGTTTTTAAGTGGTGTCATTATTTTAAGCGCCG GGGAAAAAAGTTCTGAACCGGTGTTTTACGCTACGTAGGAAACTTCCTAT TTAAATTTAAGAATTTTAAATTTAAGTTTGAAATTTTCCCATTTCGGGAC ATGCGCTTCTTAAAACAAGCATTTTCCTCAATTTTCAAATAGAAAAATCC TACTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTATGTTTGTCTAG GGAGAGTACATTGCCCCAGAAAAAATCGAGAATGTGCACACACTGAGCCC CCTAGTGGCCCAGAGCTTCGTGCACGGGGATAGCCTCCAGAGCAGCCTGG TGGCGGTGATTGTTCCGGACGAGGAGGGGGTCAAGTCGTGGGCTGTTGCA AGTGGAATCTCTGGGTGTGTCCGTCTAATCGATAGATGGATGAGGGGAAT CGATATATCCTGTGACGTGCATTTAAAAATTACCGCTTGTTTTGTATAGC GTGTTCCTTTGTGTGTGTGTGTCTGTGTGTCTGTGTGTCTGTGATTGTCT GTGTGTGTACAACTAATGTGTGTGTGTGTTTGTTTGCTGTGGTATTTGTT GGATAGAGAGAGGTGATATGAGTGTGTCTTGGGAGTTTTTTTTAGTATTG TTGAGGCGTTTTGATTTACGTTGTTGCAGGTCGTACAACTGAAACCAGCA GTTAGAGTGGTTGTGGTGTTGCACGATTGATCATCAATCTCCGCCTGTCT GCATGTTTCTTCACTCTGTAGATTTTTTTAATTTTTTGTCTTGAATGTTG TGTGCCCATGCTTTTTTTTAGATTACCTTCTTCTAACCATGGTTTTGTTG AGACCCCCTTAATATTAATAATAATAATAATAATAGTTAAAAAATGAGAC CTTTTTGTTTTTGTTCTTATTGTGGTATCACAGTGTGGTGAGGAATGAAT AGAAACGTATGTAATTTTACGAATGAGCATGTATCCTTACTCTGTGCTCA TTATCACAGTTGTGTTTAATTCACCGTCGATTTTAGGAATAATTTTTTCT TGTTTATTTTTCTTCATCCCCTTCCATGTACCCCCCCCCCCCCCCCCCCC CCCCCCCCCCCCCCCCCACACAAAACAACCAACCAACCATCTACCACACA AGCAACCGGAGGAGAANNNNNNNNNNCCCGTGTTTTTATATAATTTTTTT TTTTTTTTTTTTTTTTTCCCCCCCTTCCCTTCCCCCCCCCCCCCCCCCCC CCTGTATATATAAACACAACATACACACAGACCTACCACCTACTGTAGGT TACATGATCGATGATATCAAGATGGAGGGTTTAGATCAGGCCAAGACTGT AATTTCTTTAATCCTCAACGATCACTGCGCTATTTCTATGTCTATTATCT TGGTCCAAGATCGCGTTATCTCCTGCCCCTCAATATTTCTCCCTTTTCTA GTTTGTAGTACTAGTGGGTTCATGTTGGCGTTCTCTCTCATTGTGGTTTG CTTGACCAGGTCCACATCCTTTGCAGAGCTCTGTGCCAACCCCCAACTCA AGGCTGCGGTAATGGAGGAGCTTGAGACTGTTTCTGAGAGGGCCAAGCTG CAGAGATTTGAAATGGCAAGTTTAGTTTAGTTAAGGATGTTTGTTGGAGT CCAAAGAGTGTAGTTGTATAATTGCAAGGGTGTTGTTGAAGTGTTTGTAG TATGTTGGCTCTTGACACTACTCTACTTTTCTTGTATGCTTGCTGCTGAT TGGTTGATCTTGAAGAAAATTATTCTTTTTTCTTTTTTCCTTTAGGAGGC TGCAGCAAAAAGTTCTCCATTGAGGAAGGAGGAAAAGCAAGGCCTGTCTT GAATGGGGTCGTGCTTGGAATATGAGTGTGATAATACGTCATGAAGTTTG ATCTGAGTCAAAGTATCTTAGAGGATAAAGCCGCGTCCATTTGGGGTCCA AAATCCAATGTTGCGATTTTGATGTAATTTTGGCTATCGTGTTTGTTAGG AAGTGTCAATATCCATTTTTTGTACACACCTTTTCATAACGTAAACAATT TACCTACTCTGAAAAATTTTGGAGTAGGAAAATGTCATAAAAAAAACCCG TGGGAAACCCAGGCCCCAAACAGACAAACAGGGCAAAACTCGTACCCACT AAGATACTTTCACTCATCTGTTAGTAAGATTGGGTATTGGGGGACAGCAT CTAAAGGGGGATAAAACGGTGGGTCAAGAGGAGTATGTTACTCTTCCAAC CTTTTGTTTTCATCCTGAAAAGTCAGTGTTTGTGGTGTTATCATTGGGTG AAGATTTTGGTTGCTACAATATAACTGGCTGAATTGAGCGGAGGATGTTG TGGAAGCAGCTATTCTTCCACCAATGGGGTGAGATCCAGAAATGCTGGAT CAATCAAAAAGGGTGGCGTAAGCACCGCAATATCCCCCAAATACACTCTC AATATTGTTACTAGTTAAATCACCCCAACACCTTTTTTTTCAACCCTCAG AGCTCTACACGATCAGACCAAGAGGTATGCCATCCACCTCACCGGAAACC TCATAAATGAATCGGTTACATTGCTGTTACATCGATGACATAAAAAAAAG TATAATGTGTATTGCCACAACCACTCACATGCTTCCATCGCCAAACCAAC CCAGGTCAAGGCCATTCACCTGGAGCCCAGTCTTTTCAGTGTGGACAACA ACATGCTTACACCGACGTTCAAGCTCAAGCGCGATGTGGCCAGGGAGGCT TATGGAGAGGTCATCGGTCACCTCTACAGCACCATTGAA
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Coding sequence (CDS) from alignment at C-tenellus_contig10913:514..5052+

>mRNA_C-tenellus_contig10913.1.1 ID=mRNA_C-tenellus_contig10913.1.1|Name=mRNA_C-tenellus_contig10913.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=801bp|location=Sequence derived from alignment at C-tenellus_contig10913:514..5052+ (Choristocarpus tenellus KU2346)
TTTTTTGTGATCTACAGTTACGGGCAGACTGAGACCACTGCTGGGGCAAC
CATGACCCATCACGGAGATTTTTCAACTGGACACGTGGGGGGACCGTTCA
GCTGTACCGAGATTCGATTGGCCGACGTTCCAGAGATGGGATACCTGCAC
ACTGACTCTTGGCATGGGGATGACCCCCGGGCAGGGGGCAAGGGGGGCAT
ACCTTGCCGTGGGAGGGGAGAGGTGTGCTTCCGAGGGAGTAATATATTCC
ATGGGTACTACAAGATGGATGAGAAGACAAAGGAGACCTTTGATCACGAG
GGCTGGTTGTACTCAGGGGATATTGGTCTCTGGAATGCAGATGGCGCCCT
CAAGCTCATTGACCGAAAGAAGAACATCTTCAAACTTTCTCAGGGAGAGT
ACATTGCCCCAGAAAAAATCGAGAATGTGCACACACTGAGCCCCCTAGTG
GCCCAGAGCTTCGTGCACGGGGATAGCCTCCAGAGCAGCCTGGTGGCGGT
GATTGTTCCGGACGAGGAGGGGGTCAAGTCGTGGGCTGTTGCAAGTGGAA
TCTCTGGGTCCACATCCTTTGCAGAGCTCTGTGCCAACCCCCAACTCAAG
GCTGCGGTAATGGAGGAGCTTGAGACTGTTTCTGAGAGGGCCAAGCTGCA
GAGATTTGAAATGGCAAGTTTAGCCATTCACCTGGAGCCCAGTCTTTTCA
GTGTGGACAACAACATGCTTACACCGACGTTCAAGCTCAAGCGCGATGTG
GCCAGGGAGGCTTATGGAGAGGTCATCGGTCACCTCTACAGCACCATTGA
A
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