mRNA_C-tenellus_contig10913.1.1 (mRNA) Choristocarpus tenellus KU2346
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Overview
Homology
BLAST of mRNA_C-tenellus_contig10913.1.1 vs. uniprot
Match: D8LCY7_ECTSI (Long-chain-fatty-acid--CoA ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCY7_ECTSI) HSP 1 Score: 378 bits (970), Expect = 1.240e-124 Identity = 186/261 (71.26%), Postives = 207/261 (79.31%), Query Frame = 1
Query: 19 YGQTETTAGATMTHHGDFSTGHVGGPFSCTEIRLADVPEMGYLHTDSWHGDDPRAGGKGGIPCRGRGEVCFRGSNIFHGYYKMDEKTKETFDHEGWLYSGDIGLWNADGALKLIDRKKNIFKLSQGEYIAPEKIENVHTLSPLVAQSFVHGDSLQSSLVAVIVPDEEGVKSWAVASGISGSTSFAELCANPQLKAAVMEELETVSERAKLQRFEMASLAIHLEPSLFSVDNNMLTPTFKLKRDVAREAYGEVIGHLYSTIE 801
YGQTETTAG+TMT GDFS GHVGGPFSCTEI L DVPEMGY HTD+WHG DPR G GG C GRGE+CFRG N+F GYYK DEKT+E FD GWL SGDIG+WN DGALK+IDRKKNIFKLSQGEY+APEK+EN+HT SPLVAQS+VHGDSL+SSLVA+IVPD + WA A+G G+ S ELC NP LKA VM ELETV+ERA LQRFE AIHLEP FS N +LTPTFKLKR A EAY +VI LY+ +E
Sbjct: 393 YGQTETTAGSTMTQSGDFSVGHVGGPFSCTEICLKDVPEMGYRHTDTWHGGDPRDAGGGGEACEGRGEICFRGCNVFVGYYKDDEKTREAFDENGWLMSGDIGMWNLDGALKIIDRKKNIFKLSQGEYVAPEKLENIHTQSPLVAQSYVHGDSLRSSLVAIIVPDPDAAAGWADANGC-GNASMVELCRNPGLKADVMLELETVAERAGLQRFEKVR-AIHLEPDPFSAQNGLLTPTFKLKRAQALEAYSKVIAALYAGLE 651
BLAST of mRNA_C-tenellus_contig10913.1.1 vs. uniprot
Match: A0A835ZFW5_9STRA (Long chain acyl-CoA synthetase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFW5_9STRA) HSP 1 Score: 346 bits (887), Expect = 1.310e-111 Identity = 171/272 (62.87%), Postives = 202/272 (74.26%), Query Frame = 1
Query: 7 VIYSYGQTETTAGATMTHHGDFSTGHVGGPFSCTEIRLADVPEMGYLHTDSWHGDDPRAGGKGGIPCRGRGEVCFRGSNIFHGYYKMDEKTKETFDHEGWLYSGDIGLWNADGALKLIDRKKNIFKLSQGEYIAPEKIENVHTLSPLVAQSFVHGDSLQSSLVAVIVPDEEGVKSW-------AVASGISGSTSFAELCANPQLKAAVMEELETVSERAKLQRFEMASLAIHLEPSLFSVDNNMLTPTFKLKRDVAREAYGEVIGHLYSTIE 801
+I YGQTET AGAT+T GDFS GHVGGPF CTEI L DVPEMGYLHTDSWHG DPR GG GG PC GRGE+CFRG+N+F GYYK EKT E D +GWL+SGDIGLW ADGAL++IDRKKNIFKLSQGEYIAPEKIENVH SPLVAQSFV+GDSL+S+LVAV+VPD + V +W A A+ + + LCA+ L+ AVME+L + RA LQRFE +HLEP+ F+ +N +LTPT KLKR A Y V+ LY+ ++
Sbjct: 432 LIEGYGQTETCAGATITMPGDFSAGHVGGPFPCTEICLMDVPEMGYLHTDSWHGGDPREGGGGGEPCAGRGEICFRGTNVFAGYYKDPEKTAEAIDADGWLHSGDIGLWTADGALRIIDRKKNIFKLSQGEYIAPEKIENVHVQSPLVAQSFVYGDSLRSALVAVVVPDADAVVAWHAARHGSAAAAASNAAVDLEALCASAALREAVMEQLAAAAARAGLQRFERVR-RVHLEPAPFTPENGLLTPTMKLKRAEAAAHYASVLDELYAAVD 702
BLAST of mRNA_C-tenellus_contig10913.1.1 vs. uniprot
Match: A0A7S3Y2U0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y2U0_HETAK) HSP 1 Score: 288 bits (738), Expect = 4.370e-93 Identity = 141/263 (53.61%), Postives = 192/263 (73.00%), Query Frame = 1
Query: 10 IYSYGQTETTAGATMTHHGDFSTGHVGGPFSCTEIRLADVPEMGYLHTDSWHGDDPRAGGKGGIPCRGRGEVCFRGSNIFHGYYKMDEKTKETFDHEGWLYSGDIGLWNADGALKLIDRKKNIFKLSQGEYIAPEKIENVHTLSPLVAQSFVHGDSLQSSLVAVIVPDEEGVKSWAVASGISGSTSFAELCANPQLKAAVMEELETVSERAKLQRFEMASLAIHLEPSLFSVDNNMLTPTFKLKRDVAREAYGEVIGHLYSTI 798
I YGQTE+T AT+ G+VGGP EI L VP+MGYLHTD+ HG+D G PC GRGE+C RG N+F GYYK ++KTKET D +GWL++GDIG+W +GALK++DRKKN+FKL+QGEY+APEK+EN++ S LV Q FV+GDSLQ+SLVAV+VPDE+G+ +WA A G++G A+LCA P+L+A V+ ++ V + +KL FE+A A+HL+P FS++N ++T TFKLKRDVA++ Y I +Y ++
Sbjct: 134 IEGYGQTESTGAATLQAMYTTDAGNVGGPIVSCEIALQSVPDMGYLHTDAAHGEDR------GTPCEGRGEICLRGHNVFMGYYKDEKKTKETIDADGWLHTGDIGIWLPNGALKIVDRKKNLFKLAQGEYVAPEKLENIYGKSSLVGQVFVYGDSLQASLVAVVVPDEQGLAAWAQAKGLAGDA--AKLCALPELRADVLADILRVGKESKLHGFEIAR-AVHLDPEPFSMENGLITTTFKLKRDVAKKHYRLQIDAMYDSL 387
BLAST of mRNA_C-tenellus_contig10913.1.1 vs. uniprot
Match: A0A7S1V9E3_9STRA (Long-chain-fatty-acid--CoA ligase n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V9E3_9STRA) HSP 1 Score: 290 bits (741), Expect = 1.850e-91 Identity = 148/265 (55.85%), Postives = 182/265 (68.68%), Query Frame = 1
Query: 7 VIYSYGQTETTAGATMTHHGDF-STGHVGGPFSCTEIRLADVPEMGYLHTDSWHGDDPRAGGKGGIPCRGRGEVCFRGSNIFHGYYKMDEKTKETFDHEGWLYSGDIGLWNADGALKLIDRKKNIFKLSQGEYIAPEKIENVHTLSPLVAQSFVHGDSLQSSLVAVIVPDEEGVKSWAVASGISGSTSFAELCANPQLKAAVMEELETVSERAKLQRFEMASLAIHLEPSLFSVDNNMLTPTFKLKRDVAREAYGEVIGHLYSTI 798
V+ YGQTE A T++H DF S GHVGGP TE+ L DVPEMGYLHTD+ H G PC+GRGE+ RG N+F GYYK + KTKET D +GWL SGDIGLW G L++IDRKKNIFKLSQGEY+APEKIEN+ SPL+ Q+FV+GDS Q LVAVIVPDEE V +WA G SFA+LC QLK A+++E + +S + L FE AIHLE LFSV+N ++TPTFKLKR R+ + + I +YS++
Sbjct: 297 VVEGYGQTEGCAAGTISHPDDFASVGHVGGPTGATEVMLVDVPEMGYLHTDTDHR---------GQPCQGRGEIWIRGPNVFKGYYKDEVKTKETLDEDGWLKSGDIGLWTMSGCLQIIDRKKNIFKLSQGEYVAPEKIENILIGSPLIGQAFVYGDSFQHCLVAVIVPDEEPVAAWATKQTELGPVSFAQLCKTTQLKDAILKEAKRLSRESGLTGFETVR-AIHLESDLFSVENGLVTPTFKLKRQQLRDRFAKEIADMYSSL 551
BLAST of mRNA_C-tenellus_contig10913.1.1 vs. uniprot
Match: W7TAS6_9STRA (Long-chain-fatty-acid--CoA ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TAS6_9STRA) HSP 1 Score: 287 bits (734), Expect = 4.900e-89 Identity = 145/262 (55.34%), Postives = 183/262 (69.85%), Query Frame = 1
Query: 19 YGQTETTAGATMTHHGDFSTGHVGGPFSCTEIRLADVPEMGYLHTDSWHGDDPRAGG---KGGIPCRGRGEVCFRGSNIFHGYYKMDEKTKETFDHEGWLYSGDIGLWNADGALKLIDRKKNIFKLSQGEYIAPEKIENVHTLSPLVAQSFVHGDSLQSSLVAVIVPDEEGVKSWAVASGISGSTSFAELCANPQLKAAVMEELETVSERAKLQRFEMASLAIHLEPSLFSVDNNMLTPTFKLKRDVAREAYGEVIGHLYST 795
YGQTETTA ++T GD++TGHVGG +E+RL DVPEMGYLHTD HG R GG K PC GRGE+C RG +IF GYYK +KT ET D +GWL+SGD+G+W +G L +IDRKKNIFKL+QGEY+A EKIENV S ++AQ+FV+GDSL+S LVA++VPD E V+ WA + SFAELC LK +++E+E S+RA L FE+ AI+LE F+ N +LTPT KLKR AR+ Y +I LY+T
Sbjct: 418 YGQTETTAMTSLTFPGDWTTGHVGGVAPVSEVRLVDVPEMGYLHTDRQHGSAGRGGGAFGKAAQPCIGRGEICVRGPHIFKGYYKQPDKTAETIDAQGWLHSGDVGMWTPEGRLVIIDRKKNIFKLAQGEYVAAEKIENVLMQSEMIAQAFVYGDSLKSELVAIVVPDAEAVQDWARQESLPVDHSFAELCRQSLLKEKILDEIEVQSKRAGLHGFEIPK-AIYLESEPFTGANGLLTPTQKLKRMQARDRYSTIIQELYAT 678
BLAST of mRNA_C-tenellus_contig10913.1.1 vs. uniprot
Match: A0A7S2UI66_9STRA (Long-chain-fatty-acid--CoA ligase n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UI66_9STRA) HSP 1 Score: 283 bits (724), Expect = 1.140e-87 Identity = 145/266 (54.51%), Postives = 183/266 (68.80%), Query Frame = 1
Query: 7 VIYSYGQTETTAGATMTHHGDF-STGHVGGPFSCTEIRLADVPEMGYLHTDSWHGDDPRAGGKGGIPCRGRGEVCFRGSNIFHGYYKMDEKTKETFDHEGWLYSGDIGLWNADGALKLIDRKKNIFKLSQGEYIAPEKIENVHTLSPLVAQSFVHGDSLQSSLVAVIVPDEEGVKSWAVASGIS-GSTSFAELCANPQLKAAVMEELETVSERAKLQRFEMASLAIHLEPSLFSVDNNMLTPTFKLKRDVAREAYGEVIGHLYSTI 798
V+ YGQTE TAGAT+ H D S GHVGGP CTE+ L DVPEMGYLHTD H D P CRGRGE+ RG N+F GYYK EKTKE D EGWL+SGDIGLW G L++IDRKK IFKL+QGEY++ EK+EN+ SPL Q FV+GDSLQS+LVA++VPDEE V+SWA + SF +LC + +LK + +++ +S+ A LQ FE AI+LEP FSV++ ++TPTFKLKR R+ Y + I LY+++
Sbjct: 415 VVEGYGQTEGTAGATVGHIEDMGSNGHVGGPTPCTEVVLLDVPEMGYLHTDRMHRDQP---------CRGRGEILIRGPNVFAGYYKEPEKTKEAIDEEGWLHSGDIGLWTLQGQLQIIDRKKEIFKLAQGEYVSAEKVENIVIRSPLFGQCFVYGDSLQSALVAIVVPDEEPVRSWAANHDSNLAKASFPDLCKSERLKVEIQKQIHNLSKAAGLQGFETVR-AIYLEPLPFSVEHGLVTPTFKLKRQQLRDYYEKNIAQLYASM 670
BLAST of mRNA_C-tenellus_contig10913.1.1 vs. uniprot
Match: A0A7S2MGH8_9STRA (Long-chain-fatty-acid--CoA ligase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MGH8_9STRA) HSP 1 Score: 283 bits (724), Expect = 1.160e-87 Identity = 143/264 (54.17%), Postives = 184/264 (69.70%), Query Frame = 1
Query: 7 VIYSYGQTETTAGATMTHHGDF-STGHVGGPFSCTEIRLADVPEMGYLHTDSWHGDDPRAGGKGGIPCRGRGEVCFRGSNIFHGYYKMDEKTKETFDHEGWLYSGDIGLWNADGALKLIDRKKNIFKLSQGEYIAPEKIENVHTLSPLVAQSFVHGDSLQSSLVAVIVPDEEGVKSWAVASGIS-GSTSFAELCANPQLKAAVMEELETVSERAKLQRFEMASLAIHLEPSLFSVDNNMLTPTFKLKRDVAREAYGEVIGHLYS 792
V+ YGQTE TA AT++H D S GHVGGP + EI L DVPEMGYLHTD+ H G PCRGRGE+C RG N+F GYYK +EKT+ET D EGWL+SGD+GLW DG L++IDRKKNIFKL+ GEY+A EKIEN+ S L+ Q FVHGDS Q++LV +IVPDEE V+ WA S + SFA+LC +LK +M++++T++++ LQ FE AIH+ LF+ +N ++TPTFKLKR RE + + I +YS
Sbjct: 416 VLEGYGQTEGTAAATISHPDDMTSVGHVGGPTNVVEIVLIDVPEMGYLHTDTSHQ---------GKPCRGRGEICIRGPNVFKGYYKDEEKTRETIDEEGWLHSGDVGLWTPDGQLRIIDRKKNIFKLANGEYVAAEKIENILMQSLLIGQCFVHGDSYQTALVGIIVPDEEVVRGWATEKDASLANASFAQLCEMDELKRGIMDDIKTLTKKNGLQGFETVR-AIHISSELFTPENALVTPTFKLKRPQLREHFKKPIDEMYS 669
BLAST of mRNA_C-tenellus_contig10913.1.1 vs. uniprot
Match: A0A7S2SDD9_9STRA (Long-chain-fatty-acid--CoA ligase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SDD9_9STRA) HSP 1 Score: 282 bits (722), Expect = 2.160e-87 Identity = 152/265 (57.36%), Postives = 178/265 (67.17%), Query Frame = 1
Query: 7 VIYSYGQTETTAGATMTHHGDFSTGHVGGPFSCTEIRLADVPEMGYLHTDSWHGDDPRAGGKGGIPCRGRGEVCFRGSNIFHGYYKMDEKTKETFDHEGWLYSGDIGLWNADGALKLIDRKKNIFKLSQGEYIAPEKIENVHTLSPLVAQSFVHGDSLQSSLVAVIVPDEEGVKSWAVASGISGSTSFAELCANP--QLKAAVMEELETVSERAKLQRFEMASLAIHLEPSLFSVDNNMLTPTFKLKRDVAREAYGEVIGHLYST 795
V YGQTE A AT+T GDFS+GHVG P C EI+L DVP+MGY HTD+WHG D + G+PC GRGE+ +RG F GYYKM EKT ET D +GWLYSGDIGLW G LK+IDRKKNIFKL+QGEY+A EKIENV T SPL+ Q+FV+GDSLQS LVAVIVPDEE A G + + A CA P +L A+ EE+ T S AKL FE I LEP+ FSV+ +LTPTFK+KR Y I LY+T
Sbjct: 409 VFEGYGQTEGCAAATITAPGDFSSGHVGPPVPCVEIKLIDVPDMGYRHTDTWHGGD-----QDGMPCVGRGEIVYRGPVAFTGYYKMPEKTAETIDKDGWLYSGDIGLWTLSGNLKIIDRKKNIFKLAQGEYVAAEKIENVLTTSPLIGQAFVYGDSLQSYLVAVIVPDEETA---AARFGQGDTFNLAAACAAPGSELWQAITEEVATRSSEAKLAGFETVRKFI-LEPAPFSVEEGLLTPTFKIKRQAVEAKYKGAIDALYAT 664
BLAST of mRNA_C-tenellus_contig10913.1.1 vs. uniprot
Match: A0A7S4C7T2_9EUGL (Long-chain-fatty-acid--CoA ligase n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4C7T2_9EUGL) HSP 1 Score: 283 bits (724), Expect = 3.020e-87 Identity = 143/265 (53.96%), Postives = 188/265 (70.94%), Query Frame = 1
Query: 7 VIYSYGQTETTAGATMTHHGDFSTGHVGGPFSCTEIRLADVPEMGYLHTDSWHGDDPRAGGKGGIPCRGRGEVCFRGSNIFHGYYKMDEKTKETFDHEGWLYSGDIGLWNADGALKLIDRKKNIFKLSQGEYIAPEKIENVHTLSPLVAQSFVHGDSLQSSLVAVIVPDEEGVKSWAVASGISGSTSFAELCANPQLKAAVMEELETVSERAKLQRFEMASLAIHLEPSLFSVDNNMLTPTFKLKRDVAREAYGEVIGHLYSTIE 801
V+ YGQTE +T+ GD +TG+VG P +C IRL VP+MGYL TD+ HG D A G G+PC+GRGE+ +GSN+F GYYKM EKT+ET D +GW++SGDIG+W G LK++DRKKNIFKL+QGEYIAPEKIENV+ +VAQSFV+GDS Q LVA++VPD E + ++ A + T A LC NP AV E++T + AKL FE A+ I+L+P+ FSVDN++LTPTFKLKRD+A++ Y I +Y ++E
Sbjct: 449 VLEGYGQTEVAGASTLQFLGDQTTGNVGAPLACNSIRLVSVPDMGYLVTDTMHGKD-EARGVPGMPCKGRGEIWTKGSNVFLGYYKMPEKTEETLDEDGWVHSGDIGVWTEKGQLKIVDRKKNIFKLAQGEYIAPEKIENVYGKVDIVAQSFVYGDSFQHQLVAIVVPDLEAIPTFCKAHDLPVDTPEA-LCKNPDFIKAVHVEMDTARKEAKLFGFEHAA-KIYLDPTPFSVDNDLLTPTFKLKRDIAKKYYQAQIDEMYDSLE 710
BLAST of mRNA_C-tenellus_contig10913.1.1 vs. uniprot
Match: A0A7S1VYZ7_9STRA (Long-chain-fatty-acid--CoA ligase (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1VYZ7_9STRA) HSP 1 Score: 280 bits (716), Expect = 1.820e-86 Identity = 141/266 (53.01%), Postives = 184/266 (69.17%), Query Frame = 1
Query: 7 VIYSYGQTETTAGATMTHHGDF-STGHVGGPFSCTEIRLADVPEMGYLHTDSWHGDDPRAGGKGGIPCRGRGEVCFRGSNIFHGYYKMDEKTKETFDHEGWLYSGDIGLWNADGALKLIDRKKNIFKLSQGEYIAPEKIENVHTLSPLVAQSFVHGDSLQSSLVAVIVPDEEGVKSWAVASGIS-GSTSFAELCANPQLKAAVMEELETVSERAKLQRFEMASLAIHLEPSLFSVDNNMLTPTFKLKRDVAREAYGEVIGHLYSTI 798
++ YGQTE TA AT+ DF S GHVGGP + EI L DVPEMGYLHTD+ H G PCRGRGE+C RG N+F GYYK +EKT+ET D EGWL+SGD+GLW +G L++IDRKKNIFKL+ GEY+A EKIENV S + Q FVHGDS Q++LV +IVPDEE ++WAV S + SFAELC +LK+ +M++++++S++ L FE A HL P LF+ +N ++TPTFKLKR RE + + I +Y+ +
Sbjct: 424 IMEGYGQTEGTAAATIGDKDDFASIGHVGGPTAAVEIVLMDVPEMGYLHTDTSHQ---------GQPCRGRGEICVRGPNVFKGYYKDEEKTRETIDEEGWLHSGDVGLWTLNGQLRIIDRKKNIFKLANGEYVAAEKIENVLVQSLFIGQCFVHGDSYQTTLVGIIVPDEEVTRAWAVQKDASLANASFAELCGMEELKSKIMQDIKSLSKKCGLHGFETVR-AFHLSPELFAPENGLVTPTFKLKRPQLREHFQKNIDEMYAKL 679 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10913.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10913.1.1 >prot_C-tenellus_contig10913.1.1 ID=prot_C-tenellus_contig10913.1.1|Name=mRNA_C-tenellus_contig10913.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=267bp FFVIYSYGQTETTAGATMTHHGDFSTGHVGGPFSCTEIRLADVPEMGYLHback to top mRNA from alignment at C-tenellus_contig10913:514..5052+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10913.1.1 ID=mRNA_C-tenellus_contig10913.1.1|Name=mRNA_C-tenellus_contig10913.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=4539bp|location=Sequence derived from alignment at C-tenellus_contig10913:514..5052+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10913:514..5052+ >mRNA_C-tenellus_contig10913.1.1 ID=mRNA_C-tenellus_contig10913.1.1|Name=mRNA_C-tenellus_contig10913.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=801bp|location=Sequence derived from alignment at C-tenellus_contig10913:514..5052+ (Choristocarpus tenellus KU2346)back to top |