mRNA_C-tenellus_contig10834.1.5 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10834.1.5 vs. uniprot
Match: D8LBZ1_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBZ1_ECTSI) HSP 1 Score: 172 bits (436), Expect = 7.320e-44 Identity = 121/296 (40.88%), Postives = 153/296 (51.69%), Query Frame = 1 Query: 331 ELRKSCDLCCLRKRRCDGDGRKPCSLCRAKGTPCSYSKKERRGPKPKRRRESHLNELEGELGRTSPDNEAAYVMDGLSTSG---EGGGETVLMVGQQRV-----SQGLIHSPRTGRTSDS--MNFSPSGATGLIGLAENQYLNTYFAVWGSCMQVVMEDELRGAMIHVLSGGLLG-PQVFRESVWSGSTVGDAGKGCDT------------------------ALAVKGGGRKGEAE---------ARLDAAVGCMWASIGMGALVSGFPVDVARPYAMRAREAMKGCYDHTSEDV 1086 E RKSCDLCC RKRRCDGDG PC+LC KG C+YSKK RRGPKPK +R GR + E ++ G + G EG ++L G Q +G + R +D + +PS TG +GL EN++LN +F+ +GSC Q+V EDE+RGAMIHVLS G G P V ES +S ST + G T A G GE+E ARL A V C+WA IG+GA++ G + YA AREA+KGCYD SE+V Sbjct: 14 ERRKSCDLCCSRKRRCDGDGINPCTLCATKGVTCAYSKKGRRGPKPKPKR-----------GR---EGEGMFLFGGETERGRVGEGDIRSMLDWGGQXXXXXXXKEGAHPRLKMARMTDGDVVRLTPSHGTGTLGLEENRHLNAFFSGFGSCTQIVQEDEIRGAMIHVLSDGQFGMPSVDGESFYSPSTDSSSAGGTSTRRGIGVGEEPSLKLIRLEEGGLGIAAGTPAGAGGGESEKDLKQRAQRARLSAGVACLWAGIGVGAMLCGQTAEATSGYAENAREAIKGCYDVVSEEV 295
BLAST of mRNA_C-tenellus_contig10834.1.5 vs. uniprot
Match: A0A6H5JQB9_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQB9_9PHAE) HSP 1 Score: 122 bits (305), Expect = 1.280e-26 Identity = 102/288 (35.42%), Postives = 122/288 (42.36%), Query Frame = 1 Query: 331 ELRKSCDLCCLRKRRCDGDGRKPCSLCRAKGTPCSYSKKERRGPKPKRRRESHLNELEGELGRTSPDNEAAYVMDGLSTSGEGGGETVLMVGQQRVSQGLIHSPRTGRTSDSMNFSPSGATGLIGLAENQYLNTYFAVWGS--CMQVVMEDELRGAMIHVLSGGLLG-PQVFRESVWSGST----------------------------VGDAGKGCDTALAVKGGGRKGEAE-----ARLDAAVGCMWASIGMGALVSGFPVDVARPYAMRAREAMKGCYDHTSEDV 1086 E RKSCDLCC RKRRCDGDG PC+LC KG C+YSKK RRGPKPK +R GR + E ++ G + G RV +G I S WG DE+RGAMIHVLS G G P V ES +S ST G G T GGG + + + ARL A V C+WA IG+GA++ G + YA AREA+KGCYD SE+V Sbjct: 14 ERRKSCDLCCSRKRRCDGDGINPCTLCATKGVTCAYSKKGRRGPKPKPKR-----------GR---EGEGMFLFGGETERG-------------RVGEGGIRS--------------------------------MLDWGGQXXXXXXXXDEIRGAMIHVLSYGQFGMPSVDGESFYSPSTDSSTAGGTSTGSGSGVGEEPSLKLIRLKEGGLGIAAGTPAGADGGGSERDLKQRAQRARLSAGVACLWAGIGVGAMLCGQTAEATSGYAENAREAIKGCYDVVSEEV 242
BLAST of mRNA_C-tenellus_contig10834.1.5 vs. uniprot
Match: A0A835YKP4_9STRA (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKP4_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 1.790e-10 Identity = 81/282 (28.72%), Postives = 113/282 (40.07%), Query Frame = 1 Query: 337 RKSCDLCCLRKRRCDGDGRKPCSLCRAKGTPCSYSKKERRGPKPKRRRESHLNELEGELGRTSPDNEAAYVMDGLSTSGEGGGET------VLMVGQQRVSQGLIHSPRTGRTSDS-MNFSPSGATGLIGLAENQYLNTYFAVWGSCMQVVMEDELRGAMIHVLSGGLLGPQVFRESVWSGST-VGDAGKGCDTALAVKGGGRKGEAEARLDAAVGC-MWASIGM----------------------GALVSG-FPVDVARPYAMRAREAMKGCYDHTSEDV 1086 R +CD C RKRRC G+G +PC LC A+G PC YS + +RGPKPKR RE + +GGG+ L V +R + M P A GL+G E +YL Y + + M V D G L G +L + ++ GS+ D+G D +L + A A +A C +WA+I GAL+ G +DV Y RAR+A+K YD + +V Sbjct: 21 RLACDYCIRRKRRCIGEGTEPCQLCIARGVPCIYSPRAKRGPKPKRAREG-------------------------GSGSDGGGDAPMKAQRALAVVSRRYRNXXXXXXXIAVDIERPMTIGPLFAAGLLGAREQEYLRFYMSAYAG-MLFVPPDGTEGGGGAALQGSVLDLLRYYDTDNGGSSGSSDSGMMEDNSLDER-------ANAVAVSANKCALWAAIASXXXXXXXXXXXXXXXXXXXXAYGALLQGRTALDVVEGYLARARDAIKEVYDDAAPEV 269
BLAST of mRNA_C-tenellus_contig10834.1.5 vs. uniprot
Match: A0A6H5JUL1_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JUL1_9PHAE) HSP 1 Score: 68.6 bits (166), Expect = 7.260e-9 Identity = 76/271 (28.04%), Postives = 108/271 (39.85%), Query Frame = 1 Query: 289 LVENQENPATKLKNELRKSCDLCCLRKRRCDGDGRKPCSLCRAKGTP--CSYSKKERRGPKPKRRRESHLNE---LEGELGRTSPDNEAAYVMDGLSTSGEGGGETVLMVGQQRVSQGLIHSPRTGRTSDSMNFSPSGATGLIGLAENQYLNTYFAVWGSCMQVVMEDELRGAMIHVLSGGLLGPQVFRESVWSGSTVGDAGKGCDTALAVKGGGRKGEAEARLDAAVGCMWASIGMGALVSGFPVDVARPYAMRAREAMKGCYDHTSEDV 1086 LVE +++ +LRK+CDLC RKR+C+G + PCS C G P C YS + + G K K R + L E GEL R +P V P GR FS SGA GL G EN +L TY + + + E + M+ VLS P V + +G TA +K + E R A + W + MG+ + G + Y R A++ C+D ++V Sbjct: 110 LVEQEQSHG----QQLRKACDLCTKRKRKCNG--KHPCSQCTETGVPNQCVYSPRLKSGRKKKFRIDGVLYEEGTYGGELARANPGGVRRNV-----------------------------DPSAGR------FSASGAVGLAGHVENFFLATYLRDFNRLVPLTTESSVTEGMLEVLS-----PAV-------------SSRGLATANPIK------QPETRRQARLAVFWGVVAMGSRILGAADESTVRYLGLMRSALRECFDCNDKEV 315
BLAST of mRNA_C-tenellus_contig10834.1.5 vs. uniprot
Match: A0A6H5K678_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K678_9PHAE) HSP 1 Score: 61.2 bits (147), Expect = 1.490e-6 Identity = 79/299 (26.42%), Postives = 120/299 (40.13%), Query Frame = 1 Query: 271 SKTNVVLVENQENPATKLKNELRKSCDLCCLRKRRCDGDGRKPCSLCRAKGTP-CSYSKKERRGPKPKRRRESHLNELEGELGRTSPDNEAAYVMDGLSTSGEGGGETVLMVGQQRVSQGLIHSPRTGRTSDSMNF-----SPSGATGLIGLAENQYLNTYFAVWGSCMQVVMEDELRGAMIHVLSGGLLGPQVFRESVWSGSTV----------GDAGKGCDTALAVKGGGRKGEA---------EARL--DAAVGCMWASIGMGALVSGFPVDVARPYAMRAREAMKGCYDHTSEDV 1086 S NV E + +P T + L+KSCD C R++RCDG ++ CS C KG P C YS + P + + + GE D+ + + L E + G Q ++ G T + F S S ATGL GL EN+ L +F G + + E +RGAM+ V+ + G+T DT R EA +A L DA+ +W +I +GALV G+P+ + Y A++ + C + D+ Sbjct: 82 STGNVPSKERRRHPQTIV---LKKSCDFCFKRRKRCDGRAQRRCSFCIEKGRPECHYSMRSL----PSKSKTPTVVPTSGEEDAVRDDSPSPGLS--LRARAEVDNDANADTGAQHTAKKKGSGTAVGVTGLVLPFKRARLSASPATGLAGLLENELLGDFFGCLGF-LSLATESIIRGAMVSVMRAN-------NVLIQQGATTPARPXXXXXXXXXXXXXDTEETPVSSVRTEEACWRNAVTTEDAALPRDASTCILWCAIALGALVRGYPLPHVQRYVHLAKDTLASCSASAALDM 363
BLAST of mRNA_C-tenellus_contig10834.1.5 vs. uniprot
Match: D7FTD4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTD4_ECTSI) HSP 1 Score: 55.8 bits (133), Expect = 7.800e-5 Identity = 44/132 (33.33%), Postives = 63/132 (47.73%), Query Frame = 1 Query: 676 SPSGATGLIGLAENQYLNTYFAVWGSCMQVVMEDELRGAMIHVLSGGLLGPQVFRESVWSGSTVGDAGKGCDTALAVKGGGRKGEAEARLDAAVGC-MWASIGMGALVSGFPVDVARPYAMRAREAMKGCYD 1068 S S ATGL+G+ EN+ LN++F+ G + E +RGA++ V+ L P V E V G GK E DAA C +W ++ +GALV G P + A Y AR ++ C+D Sbjct: 12 SASPATGLVGMKENELLNSFFSCLGF-FPLTHESLVRGAIMEVV----LVPPVGAEDVAPTRPAGAWGKS--------------EPRQGTDAASTCTLWCAVAIGALVQGQPTERATDYLHLARRSVSHCFD 124 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10834.1.5 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10834.1.5 >prot_C-tenellus_contig10834.1.5 ID=prot_C-tenellus_contig10834.1.5|Name=mRNA_C-tenellus_contig10834.1.5|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=276bp MAELSKTNVVLVENQENPATKLKNELRKSCDLCCLRKRRCDGDGRKPCSLback to top mRNA from alignment at C-tenellus_contig10834:175..3838- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10834.1.5 ID=mRNA_C-tenellus_contig10834.1.5|Name=mRNA_C-tenellus_contig10834.1.5|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3664bp|location=Sequence derived from alignment at C-tenellus_contig10834:175..3838- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10834:175..3838- >mRNA_C-tenellus_contig10834.1.5 ID=mRNA_C-tenellus_contig10834.1.5|Name=mRNA_C-tenellus_contig10834.1.5|organism=Choristocarpus tenellus KU2346|type=CDS|length=828bp|location=Sequence derived from alignment at C-tenellus_contig10834:175..3838- (Choristocarpus tenellus KU2346)back to top |