mRNA_C-tenellus_contig10824.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10824.1.1 vs. uniprot
Match: D8LN93_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN93_ECTSI) HSP 1 Score: 170 bits (431), Expect = 9.040e-45 Identity = 98/243 (40.33%), Postives = 143/243 (58.85%), Query Frame = 1 Query: 1 MNPILHCRRRSTSFWLHFPHIELIFLIFAFEGAITAQASMLRSS-CPRYFWIALLTMLAFPVLMVVMVLRTIYVRVLPGDLLIFRNSH-DHGTAKAENGNSEGIGTKARSLIHSSTKYGCPSTRCKKLSSHLLLQLNNLFGYAMRILLAVAIFSWADHGRWENAQLSDEIKCREAEWFRIGFEPIFIDFNRTGSIYFALFLIKCFSVACVGALINDRVLQLSLFFSIHAIDFILLAHYQPFAN 723 ++P+ CR S S WLHFPH+EL+FL FA+EGA+ +Q S LR + CP A L ++ +P+LM V VLRT +VRV P L++F D T A G++E G +ARS S R H ++F+WA+ G WE A+ +E RE +WFRIGFEP+F+DF ++G+ + A L++ ++ C+GALI++ VLQLSLF ++H + F+LL ++PFAN Sbjct: 1020 LSPVAECREHSRSAWLHFPHVELVFLFFAYEGAVASQVSALREAGCPPVMIAAGLALVFYPILMFVAVLRTFFVRVRPNTLIVFTPKEADDDTGDA--GDAE-EGQRARSASFLS------KVRAGWEEDH-------------------SLFAWANKGTWETAETDNEGTRREGQWFRIGFEPLFVDFTKSGAWFVAFTLVEWAALGCIGALIDESVLQLSLFCALHTLSFLLLVVFRPFAN 1234
BLAST of mRNA_C-tenellus_contig10824.1.1 vs. uniprot
Match: D7G5F3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5F3_ECTSI) HSP 1 Score: 160 bits (404), Expect = 2.110e-43 Identity = 96/240 (40.00%), Postives = 135/240 (56.25%), Query Frame = 1 Query: 10 ILHCRRRSTSFWLHFPHIELIFLIFAFEGAITAQASMLRS-SCPRYFWIALLTMLAFPVLMVVMVLRTIYVRVLPGDLLIFRNSHDHGTAKAENGNSEGIGTKARSLIHSSTKYGCPSTRCKKLSSHLLLQLNNLFGYAMRILLAVAIFSWADHGRWENAQLSDEIKCREAEWFRIGFEPIFIDFNRTGSIYFALFLIKCFSVACVGALINDRVLQLSLFFSIHAIDFILLAHYQPFANR 726 + CR S S WLH+PH+EL+FL+FAFEGA+T+Q S LR+ S F+ A+ T++ +PVLMV MV+RT VRV L++F + N G+ S I+S T G +K SS +F+WAD G+WE Q +DE R A+WFRIGFEP+F DF + GS + LI+ +AC+ L+++ +Q LF +IH++ FILL +PFANR Sbjct: 186 VSQCRELSQSAWLHYPHLELVFLLFAFEGAVTSQVSALRTTSSSTVFYAAVATLVFYPVLMVAMVVRTHRVRVRSDALIVFTS------------NESDEGSTGTSSIYSKTIAGL-----RKDSS---------------------LFAWADKGQWETVQTTDEDARRNADWFRIGFEPLFADFTQAGSWFIVYTLIEWAVLACIAVLVDNTAVQCGLFCAIHSMTFILLVACKPFANR 387
BLAST of mRNA_C-tenellus_contig10824.1.1 vs. uniprot
Match: D7FWS4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWS4_ECTSI) HSP 1 Score: 166 bits (419), Expect = 3.760e-43 Identity = 95/242 (39.26%), Postives = 136/242 (56.20%), Query Frame = 1 Query: 1 MNPILHCRRRSTSFWLHFPHIELIFLIFAFEGAITAQASMLRSS-CPRYFWIALLTMLAFPVLMVVMVLRTIYVRVLPGDLLIFRNSHDHGTAKAENGNSEGIGTKARSLIHSSTKYGCPSTRCKKLSSHLLLQLNNLFGYAMRILLAVAIFSWADHGRWENAQLSDEIKCREAEWFRIGFEPIFIDFNRTGSIYFALFLIKCFSVACVGALINDRVLQLSLFFSIHAIDFILLAHYQPFAN 723 ++P+ CR STS WLHFPH+EL+FL FAFEGA+ + AS +R+S CP F+ A+ M+ +P+LM V V RT+ VRV P LLIF+ + GT NG++ PS LS N ++FSWAD G+WE Q D RE +WFRIGFEP+F+D+ + G+ + + L++ + A VG +I + V+QL LF +H++ F +L +PFAN Sbjct: 1379 LSPVATCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIRNSECPEIFYTAIAAMVLYPLLMFVTVFRTLLVRVRPNVLLIFKTYAEDGT----NGDA-------------------PSRAGGLLSRFKSSWAENY-----------SLFSWADKGQWETVQTPDRQVSREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWAAFAFVGVMIENSVVQLVLFCGLHSVMFFILMFLKPFAN 1586
BLAST of mRNA_C-tenellus_contig10824.1.1 vs. uniprot
Match: A0A6H5JD90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD90_9PHAE) HSP 1 Score: 165 bits (418), Expect = 5.360e-43 Identity = 93/242 (38.43%), Postives = 139/242 (57.44%), Query Frame = 1 Query: 1 MNPILHCRRRSTSFWLHFPHIELIFLIFAFEGAITAQASMLRSS-CPRYFWIALLTMLAFPVLMVVMVLRTIYVRVLPGDLLIFRNSHDHGTAKAENGNSEGIGTKARSLIHSSTKYGCPSTRCKKLSSHLLLQLNNLFGYAMRILLAVAIFSWADHGRWENAQLSDEIKCREAEWFRIGFEPIFIDFNRTGSIYFALFLIKCFSVACVGALINDRVLQLSLFFSIHAIDFILLAHYQPFAN 723 ++P+ CR STS WLHFPH+EL+FL FAFEGA+ + AS +R+S CP F+ A+ M+ +P+LM V+RT++VRV P +LLIF+ + GT NGN+ P+ R LS N ++FSWAD G+WE Q + RE +WFRIGFEP+F+D+ + G+ + + L++ S+A VG +I++ +QL LF + + F++L +PFAN Sbjct: 1601 LSPVAMCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIRNSECPEMFYTAIAAMVLYPLLMFATVVRTLFVRVRPDELLIFKTYDEDGT----NGNT-------------------PNGRGGFLSRFKSSWAENY-----------SLFSWADKGQWETVQTPNRNITREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWASIALVGVMIDNSYVQLLLFCGLQSAMFLILVCLKPFAN 1808
BLAST of mRNA_C-tenellus_contig10824.1.1 vs. uniprot
Match: D8LLG6_ECTSI (Mucin-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLG6_ECTSI) HSP 1 Score: 165 bits (417), Expect = 7.280e-43 Identity = 93/242 (38.43%), Postives = 139/242 (57.44%), Query Frame = 1 Query: 1 MNPILHCRRRSTSFWLHFPHIELIFLIFAFEGAITAQASMLRSS-CPRYFWIALLTMLAFPVLMVVMVLRTIYVRVLPGDLLIFRNSHDHGTAKAENGNSEGIGTKARSLIHSSTKYGCPSTRCKKLSSHLLLQLNNLFGYAMRILLAVAIFSWADHGRWENAQLSDEIKCREAEWFRIGFEPIFIDFNRTGSIYFALFLIKCFSVACVGALINDRVLQLSLFFSIHAIDFILLAHYQPFAN 723 ++P+ CR STS WLHFPH+EL+FL FAFEGA+ + AS +R+S CP F+ A+ M+ +P+LM V+RT++VRV P +LLIF+ + GT NGN+ P+ R LS N ++FSWAD G+WE Q + RE +WFRIGFEP+F+D+ + G+ + + L++ S+A VG +I++ +QL LF + + F++L +PFAN Sbjct: 1560 LSPVATCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIRNSECPEMFYTAIAAMVLYPLLMFATVVRTLFVRVRPDELLIFKTYDEDGT----NGNA-------------------PNCRGGFLSHFKSSWAENY-----------SLFSWADKGQWETVQTPNRNITREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWASIALVGVMIDNSNVQLLLFCGLQSAMFLILVCLKPFAN 1767
BLAST of mRNA_C-tenellus_contig10824.1.1 vs. uniprot
Match: D7G1L9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L9_ECTSI) HSP 1 Score: 154 bits (390), Expect = 6.500e-40 Identity = 88/239 (36.82%), Postives = 132/239 (55.23%), Query Frame = 1 Query: 19 CRRRSTSFWLHFPHIELIFLIFAFEGAITAQASMLRSS-CPRYFWIALLTMLAFPVLMVVMVLRTIYVRVLPGDLLIFR---NSHDHGTAKAENGNSEGIGTKARSLIHSSTKYGCPSTRCKKLSSHLLLQLNNLFGYAMRILLAVAIFSWADHGRWENAQLSDEIKCREAEWFRIGFEPIFIDFNRTGSIYFALFLIKCFSVACVGALINDRVLQLSLFFSIHAIDFILLAHYQPFAN 723 CR RS+S WL+FPHIEL+FL+FAFEGA+ +Q + +R CP F+ A +++ +PVLM+++ RT VRV P L++F+ +HGT GT RS + S + G ++F+WA+ G WE + DE RE + FRIGFEP+F+DF + S + FL++ +AC L++D V+QL LF +H++ F+LL ++PFAN Sbjct: 252 CRYRSSSVWLYFPHIELLFLLFAFEGAMASQLATMRGGGCPWVFYSACASLVVYPVLMIILSYRTHRVRVAPDTLIVFKPVGEEENHGTD----------GTVPRSFL-SKVRTGLKEDH--------------------------SMFAWANTGAWETVETPDEETVREGDQFRIGFEPLFVDFTKKASWFTVYFLLEMTGIACTAVLVDDSVVQLFLFCGLHSLSFLLLVIFRPFAN 453
BLAST of mRNA_C-tenellus_contig10824.1.1 vs. uniprot
Match: A0A6H5J9C2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9C2_9PHAE) HSP 1 Score: 151 bits (382), Expect = 1.700e-38 Identity = 90/236 (38.14%), Postives = 132/236 (55.93%), Query Frame = 1 Query: 19 CRRRSTSFWLHFPHIELIFLIFAFEGAITAQASMLRSS-CPRYFWIALLTMLAFPVLMVVMVLRTIYVRVLPGDLLIFRNSHDHGTAKAENGNSEGIGTKARSLIHSSTKYGCPSTRCKKLSSHLLLQLNNLFGYAMRILLAVAIFSWADHGRWENAQLSDEIKCREAEWFRIGFEPIFIDFNRTGSIYFALFLIKCFSVACVGALINDRVLQLSLFFSIHAIDFILLAHYQPFAN 723 CR S S WLH+PH+ELIFL FAFEGA+T+Q + LRS+ + A+ T++ +P+LMVVMV RT V V P L++F +S G PST + +S L N F ++FSWAD G+WE Q +++ R+A+WFRIGFEP+F DF + GS + LI+C +A + L+++ +Q LF ++H++ F+LL ++PFAN Sbjct: 356 CRELSQSPWLHYPHLELIFLFFAFEGAVTSQMAALRSANSSTILYAAVATLVLYPLLMVVMVARTHRVWVQPDALIVFASSETEEALA-----------------------GKPSTLSRTVSG-----LKNDF----------SLFSWADKGQWETVQTANDKARRKADWFRIGFEPLFADFTQAGSWFIIYTLIECAVLASIAVLVDNSAMQFLLFCAMHSLTFVLLVGWKPFAN 553
BLAST of mRNA_C-tenellus_contig10824.1.1 vs. uniprot
Match: A0A6H5KV63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV63_9PHAE) HSP 1 Score: 140 bits (353), Expect = 6.240e-35 Identity = 85/261 (32.57%), Postives = 129/261 (49.43%), Query Frame = 1 Query: 1 MNPILHCRRRSTSFWLHFPHIELIFLIFAFEGAITAQASMLRSS-CPRYFWIALLTMLAFPVLMVVMVLRTIYVRVLPGDLLIFRNSHDHGTAKAENGNSEGIGTKARSLIHSSTKYGCPSTRCKKLSSHLLLQLNNLFGYAMRILLAVAIFSWADHGRWENAQLSDEIKCREAEWFRIGFEPIFIDFNRTGSIYFALFLIK-CF-----------------SVACVGALINDRVLQLSLFFSIHAIDFILLAHYQPFANR 726 ++ + CR S WLHFPH+EL+FL FA+EGA+ +Q S LR + C A L ++ +P+LM V VLRT +VRV P ++F + G + ++F+WA+ G WE A+ +E RE +WFRIGFEP+F+DF ++G+ + A L++ C ++ C+GALI++ VLQLSLF ++H + F+LL ++PFANR Sbjct: 161 LSSVAECREHSQFAWLHFPHVELVFLFFAYEGAVASQVSALREAGCLPVMIAAGLALVFYPILMFVAVLRTFFVRVRPNTPIVFLSKVRAGWEEDH-----------------------------------------------------SLFAWANKGTWETAETDNEGIRREGQWFRIGFEPLFVDFTKSGAWFVAFTLVEGCLGLGHAVSFLLIYFAQWAALGCIGALIDESVLQLSLFCALHTLSFLLLVVFRPFANR 368
BLAST of mRNA_C-tenellus_contig10824.1.1 vs. uniprot
Match: D8LN89_ECTSI (Liver stage antigen 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN89_ECTSI) HSP 1 Score: 137 bits (346), Expect = 2.260e-33 Identity = 88/243 (36.21%), Postives = 130/243 (53.50%), Query Frame = 1 Query: 1 MNPILHCRRRSTSFWLHFPHIELIFLIFAFEGAITAQASMLRSSCPRYFWI-ALLTMLAFPVLMVVMVLRTIYVRVLPGDLLIF-RNSHDHGTAKAENGNSEGIGTKARSLIHSSTKYGCPSTRCKKLSSHLLLQLNNLFGYAMRILLAVAIFSWADHGRWENAQLSDEIKCREAEWFRIGFEPIFIDFNRTGSIYFALFLIKCFSVACVGALINDRVLQLSLFFSIHAIDFILLAHYQPFAN 723 ++ I CR RS S WLHFPH+EL++L+FAFEGA+ AQ S +R + I A+L +L FPVLM V+ T + ++ ++F N+ D A+++ L S +G R K S Y+M F+W++ G WE+ DE R +WFRIGFEP+F+DF GS + LI+ + A VG ++++ VLQLSLF + + + F+LL +PFAN Sbjct: 2390 LSKIAECRERSQSVWLHFPHVELMYLLFAFEGAVAAQVSAIRENATLLVLILAVLALLFFPVLMTFNVMCTFFGKIRSKKHIVFIPNADDAVEAESD-------------LYTSVRSFGSKVRRGLKES------------YSM--------FAWSNKGEWESVDTPDEEDKRARDWFRIGFEPLFVDFTGAGSWFAVYALIELVANAVVGVVVDNSVLQLSLFGAFNTVSFLLLVVLKPFAN 2599
BLAST of mRNA_C-tenellus_contig10824.1.1 vs. uniprot
Match: A0A6H5KCW7_9PHAE (VWFA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCW7_9PHAE) HSP 1 Score: 136 bits (343), Expect = 5.030e-33 Identity = 80/247 (32.39%), Postives = 131/247 (53.04%), Query Frame = 1 Query: 1 MNPILHCRRRSTSFWLHFPHIELIFLIFAFEGAITAQASMLRSSCPRYFWIALLTMLAFPVLMVVMVLRTIYVRVLPGDLLIFRNSHDHGTAKAENGNSEGIGTKARSLIHSSTKYGCPSTRCKKLSSHLLLQLNNLFGYAMRILLAV----AIFSWADHGRWENAQLSDEIKCREAEWFRIGFEPIFIDFNRTGSIYFALF-LIKCFSVACVGALINDRVLQLSLFFSIHAIDFILLAHYQPFANR 726 + P+ CR RS S W+HFPH+EL+F+++AF+GA+ AQ +LR +A + ++ +PVL++ +++R ++ RV P G A A T+ S ++ + GC G+ R+ + + F+WA G W + D + R WFRIGFEP+F+D+ + GS +FAL+ L++ +ACVG LI+ +QL +F ++ + F+L+AH PFANR Sbjct: 673 LGPVAKCRDRSKSLWIHFPHVELLFILYAFQGALAAQVDVLRHGSGALVPVAAIALVVYPVLVLWVMVRVVFARVFPPTAT--------GLAFAV--------TQKDSYYTTNGQRGCR-------------------GFFWRVRKGLEEDHSAFAWAKKGAWRTVENEDAKEQRLRNWFRIGFEPLFVDYTKAGS-WFALYALMEAAVIACVGVLIDSSQVQLLIFLGLNVVQFVLVAHLTPFANR 883 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10824.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10824.1.1 >prot_C-tenellus_contig10824.1.1 ID=prot_C-tenellus_contig10824.1.1|Name=mRNA_C-tenellus_contig10824.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=243bp MNPILHCRRRSTSFWLHFPHIELIFLIFAFEGAITAQASMLRSSCPRYFWback to top mRNA from alignment at C-tenellus_contig10824:840..4537- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10824.1.1 ID=mRNA_C-tenellus_contig10824.1.1|Name=mRNA_C-tenellus_contig10824.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3698bp|location=Sequence derived from alignment at C-tenellus_contig10824:840..4537- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10824:840..4537- >mRNA_C-tenellus_contig10824.1.1 ID=mRNA_C-tenellus_contig10824.1.1|Name=mRNA_C-tenellus_contig10824.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=729bp|location=Sequence derived from alignment at C-tenellus_contig10824:840..4537- (Choristocarpus tenellus KU2346)back to top |