mRNA_C-tenellus_contig1075.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig1075.1.1 vs. uniprot
Match: D7G0B6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0B6_ECTSI) HSP 1 Score: 366 bits (940), Expect = 6.840e-113 Identity = 175/272 (64.34%), Postives = 227/272 (83.46%), Query Frame = 1 Query: 109 LLGIVGVITVIVVSTPSLAVIVLPILGVFLYVTRRYLKTARSLKRLEAVTRSPLYAHFGESINGMAIIRAYKAQKRFIKDSEERVDALNRAYLYLFCTTFWLASRLRIVGSLACGLVGAYLVGQVNNIDSASGGLVITYTFAITFNVVFSARLYAEMEMNVNSIERLDEYCKVPQEAAAVVPEKRPPGLWPSKGEVHIENLTLKYNSSTEPVLCGISFHVPPRTRVGIVGRTGAGKSSLTNVLFRLVEPQPGSSIRIDGLDILGMGLQDLRR 924 LLG+VGV+ VI + P+L V ++P+LG+ Y + RYL+T+R LKRLEAVTRSPLYAHFGES++G+A IRAY+A+KRFI+ +E+RV+ LNRA+ L+C+ +WL +R+R++G+ C LVG +LVG V+++D ++ GLVITY+ T +VF+ RL+A+MEM+VNSIERLDEYCK+PQEA AV+P++RPP WPS GEV I+NLTLKY SS EPVL G++FHVPPRTRVGIVGRTGAGKSSL N LFR+VEP PGSS+ +DG D+L MGLQDLRR Sbjct: 1061 LLGVVGVVVVIATAIPALTVAMIPVLGLCYYYSNRYLQTSRQLKRLEAVTRSPLYAHFGESVSGVATIRAYEAEKRFIQGNEDRVNNLNRAHFSLWCSNYWLTNRVRMIGAAVCALVGGFLVGSVSSVDGSTAGLVITYSLNFTLTIVFTVRLHAQMEMSVNSIERLDEYCKLPQEAPAVIPDRRPPSNWPSAGEVDIKNLTLKYASSNEPVLHGLTFHVPPRTRVGIVGRTGAGKSSLMNALFRMVEPMPGSSVVVDGEDVLRMGLQDLRR 1332
BLAST of mRNA_C-tenellus_contig1075.1.1 vs. uniprot
Match: A0A835YUJ8_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUJ8_9STRA) HSP 1 Score: 337 bits (864), Expect = 7.880e-103 Identity = 166/272 (61.03%), Postives = 211/272 (77.57%), Query Frame = 1 Query: 109 LLGIVGVITVIVVSTPSLAVIVLPILGVFLYVTRRYLKTARSLKRLEAVTRSPLYAHFGESINGMAIIRAYKAQKRFIKDSEERVDALNRAYLYLFCTTFWLASRLRIVGSLACGLVGAYLVGQVNNIDSASGGLVITYTFAITFNVVFSARLYAEMEMNVNSIERLDEYCKVPQEAAAVVPEKRPPGLWPSKGEVHIENLTLKYNSSTEPVLCGISFHVPPRTRVGIVGRTGAGKSSLTNVLFRLVEPQPGSSIRIDGLDILGMGLQDLRR 924 LLG+VGV+ VI V+ P L V +LP+L + + RYL+T+R LKRLEAV RSPLYAHF ESING + IRA+ ++RFI+ + VD LNR +LYL+C +WL +R+R++GS CGLVG +LV V+NID ++GGLV+TY T ++VF+ RL+A+MEM+VNSIERLDEYC + QEA A++P+ RPP WP G + I NLTLKY SST PVL ++FHVP RTRVGIVGRTGAGKSSLTN LFR+VEPQ GS I IDG+DI+ +GL+DLRR Sbjct: 883 LLGVVGVVAVIAVAIPVLTVAMLPVLLLCYWYGERYLQTSRQLKRLEAVNRSPLYAHFSESINGASTIRAFSQEQRFIETNCAHVDKLNRCHLYLWCANYWLTNRVRLIGSAVCGLVGVFLVADVSNIDGSTGGLVLTYVLQFTVSIVFTVRLHAQMEMSVNSIERLDEYCNLKQEAPAIIPDNRPPDGWPQHGSIDIRNLTLKYASSTAPVLHNLTFHVPERTRVGIVGRTGAGKSSLTNALFRMVEPQAGSIITIDGVDIMKIGLKDLRR 1154
BLAST of mRNA_C-tenellus_contig1075.1.1 vs. uniprot
Match: A0A7S3Y0N1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y0N1_HETAK) HSP 1 Score: 251 bits (640), Expect = 4.110e-75 Identity = 137/272 (50.37%), Postives = 183/272 (67.28%), Query Frame = 1 Query: 109 LLGIVGVITVIVVSTPSLAVIVLPILGVFLYVTRRYLKTARSLKRLEAVTRSPLYAHFGESINGMAIIRAYKAQKRFIKDSEERVDALNRAYLYLFCTTFWLASRLRIVGSLACGLVGAYLVGQVNNIDSASGGLVITYTFAITFNVVFSARLYAEMEMNVNSIERLDEYCKVPQEAAAVVPEKRPPGLWPSKGEVHIENLTLKYNSSTEPVLCGISFHVPPRTRVGIVGRTGAGKSSLTNVLFRLVEPQPGSSIRIDGLDILGMGLQDLRR 924 LL ++G + I V+ P ++ +L I V LY+ YL TAR LKRLEAV++SPLYAHF E++ G A +RAY A+ RF + VD + R + +L+C +WLA+R+RI+GSL GL G ++V V ID + GLV+++ +++ VF+ RL+A+MEM+VNSIER DEYC + QEA A V E RP WP G + + +L L+Y S PVL G+ F VP R RVG+VGRTGAGKSSL LFRLVEP+ GS I IDG+D +GL LRR Sbjct: 164 LLAVLGTVFSICVAIPWMSAGLLLITAVCLYLGHLYLLTARQLKRLEAVSKSPLYAHFSETLAGAATVRAYGAEGRFAARNAALVDRVTRVHYHLWCANYWLATRIRILGSLVIGLAGLFIVLFVAEIDDTTAGLVLSFASQYSYSCVFTIRLHAQMEMSVNSIERADEYCSLEQEAPADVREARPRPGWPEAGALEVRDLVLRYPSMQRPVLRGLRFAVPARARVGVVGRTGAGKSSLMAALFRLVEPEAGS-IWIDGVDTGKLGLHTLRR 434
BLAST of mRNA_C-tenellus_contig1075.1.1 vs. uniprot
Match: A0A6H5K4L0_9PHAE (ABC protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K4L0_9PHAE) HSP 1 Score: 252 bits (644), Expect = 2.560e-72 Identity = 134/274 (48.91%), Postives = 192/274 (70.07%), Query Frame = 1 Query: 109 LLGIVGVITVIVVSTPSLAVIVLPILGVFLYVTRRYLKTARSLKRLEAVTRSPLYAHFGESINGMAIIRAYKAQKRFIKDSEERVDALNRAYLYLFCTTFWLASRLRIVGSLACGLVGAYLV--GQVNNIDSASGGLVITYTFAITFNVVFSARLYAEMEMNVNSIERLDEYCK-VPQEAAAVVPEKRPPGLWPSKGEVHIENLTLKYNSSTEPVLCGISFHVPPRTRVGIVGRTGAGKSSLTNVLFRLVEPQPGSSIRIDGLDILGMGLQDLR 921 L + ++TVIV + P L + ++PI + + + RYL +R LKRL++V++SP+YAHF ES+NG++ IRA+ AQ RF+++S RVD NRA+ YL+ + W R+++VG+ L GA++V G+ ++I++ GL + Y T +V + R +A +EM +NS+ER+ EY K VPQEAA VV +RP WPS+G + ++NLT++Y S+ PV+ G+SF V PRTRVG+VGRTGAGKSSL LFRLVEP PGS I IDG+D+L MGL DLR Sbjct: 1132 LFSALSIVTVIVYTVPFLILALVPISCLAIVLGHRYLNASRELKRLDSVSKSPIYAHFTESVNGVSTIRAFGAQARFVEESCRRVDRCNRAHFYLWVSNRWFNVRIQLVGATVAFLAGAFVVWWGK-DHIEATVAGLALLYALQFTDSVKYLVRQHALLEMQMNSVERILEYTKNVPQEAARVVEGRRPAPTWPSEGALSVKNLTVQYPSTDAPVISGMSFDVAPRTRVGVVGRTGAGKSSLMTALFRLVEPSPGSEITIDGMDVLKMGLADLR 1404
BLAST of mRNA_C-tenellus_contig1075.1.1 vs. uniprot
Match: A0A836CNA1_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNA1_9STRA) HSP 1 Score: 236 bits (602), Expect = 1.200e-68 Identity = 128/271 (47.23%), Postives = 187/271 (69.00%), Query Frame = 1 Query: 115 GIVGVITVIVVSTPSLAVIVLPILGVFLYVTRRYLKTARSLKRLEAVTRSPLYAHFGESINGMAIIRAYKAQKRFIKDSEERVDALNRAYLYLFCTTFWLASRLRIVGSLACGLVGAYLV--GQVNNIDSASGGLVITYTFAITFNVVFSARLYAEMEMNVNSIERLDEYCKVPQEAAAVVPEKRPPGLWPSKGEVHIENLTLKYNSSTEPVLCGISFHVPPRTRVGIVGRTGAGKSSLTNVLFRLVEPQPGSSIRIDGLDILGMGLQDLR 921 + ++ VI + P L + + PI + V R YL T+R LKRL++VT+SP+YAHF ES+ G++ IRA+ AQ+RF+++S RVDA NRA+ L+ + W R++++G+ L GA+LV G+ ++I + + GL + Y T + + R +A +EM +NS+ER+ E+ ++PQEA VV +RPP WP G + +LTL+Y S+T PV+ G++F+V PRTR+GIVGRTGAGKSSLT LFRLVEP+ GS + IDG+DIL MGL+DLR Sbjct: 246 SVASILVVIAYTAPWLIIALGPISALSWAVGRLYLNTSRELKRLDSVTKSPIYAHFTESVAGVSTIRAFAAQQRFLRESFRRVDACNRAHFNLWVSNRWFNIRVQLIGASVALLAGAFLVYWGK-DHIAATTAGLALLYALNFTDALKYLVREHALLEMQMNSVERVIEFTQIPQEAPPVVEGRRPPPNWPQHGAIQFTDLTLQYPSATTPVIEGMTFNVEPRTRIGIVGRTGAGKSSLTAALFRLVEPKRGSIV-IDGVDILTMGLEDLR 514
BLAST of mRNA_C-tenellus_contig1075.1.1 vs. uniprot
Match: Q6C5X7_YARLI (YALI0E14234p n=5 Tax=Yarrowia TaxID=4951 RepID=Q6C5X7_YARLI) HSP 1 Score: 238 bits (606), Expect = 3.160e-67 Identity = 120/271 (44.28%), Postives = 178/271 (65.68%), Query Frame = 1 Query: 112 LGIVGVITVIVVSTPSLAVIVLPILGVFLYVTRRYLKTARSLKRLEAVTRSPLYAHFGESINGMAIIRAYKAQKRFIKDSEERVDALNRAYLYLFCTTFWLASRLRIVGSLACGLVGAYLVGQVNNIDSASGGLVITYTFAITFNVVFSARLYAEMEMNVNSIERLDEYCKVPQEAAAVVPEKRPPGLWPSKGEVHIENLTLKYNSSTEPVLCGISFHVPPRTRVGIVGRTGAGKSSLTNVLFRLVEPQPGSSIRIDGLDILGMGLQDLRR 924 L + + +I + TPS + I G++L + YL T+R LKRL++ T+SP+Y HFGE++ G+ IRAY + RF++D+ E+VD NR + YL+ WL+ R+ + G+L GA ++ + IDS G+ +TY + NV+++ RLYA EMN+NS+ER+ EY + QE AV+ + RPP WPSKGE+ + NL+LKY V+ ++FHV P+++VGIVGRTGAGKS++ FRL+E GS I+IDG+DI +GL+DLRR Sbjct: 1172 LACLATVVLITMITPSFLFFGIIIAGIYLAIGIFYLTTSRELKRLDSTTKSPIYQHFGETLVGVTTIRAYGDEPRFVRDNLEKVDTNNRPFFYLWVANRWLSFRVDLAGALVTFFAGASILMAIGKIDSGLAGVSLTYAILFSENVLWAVRLYAVNEMNMNSVERIQEYLDLDQEPPAVIEDSRPPANWPSKGEIEVNNLSLKYAPEVPDVIKDVTFHVQPQSKVGIVGRTGAGKSTIITAFFRLIEAHQGS-IKIDGVDIGKIGLKDLRR 1441
BLAST of mRNA_C-tenellus_contig1075.1.1 vs. uniprot
Match: A0A370TJ24_9HELO (ABC transporter transmembrane region n=1 Tax=Venustampulla echinocandica TaxID=2656787 RepID=A0A370TJ24_9HELO) HSP 1 Score: 233 bits (595), Expect = 9.430e-66 Identity = 123/270 (45.56%), Postives = 177/270 (65.56%), Query Frame = 1 Query: 112 LGIVGVITVIVVSTPSLAVIVLPILGVFLYVTRRYLKTARSLKRLEAVTRSPLYAHFGESINGMAIIRAYKAQKRFIKDSEERVDALNRAYLYLFCTTFWLASRLRIVGSLACGLVGAYLVGQVNNIDSASGGLVITYTFAITFNVVFSARLYAEMEMNVNSIERLDEYCKVPQEAAAVVPEKRPPGLWPSKGEVHIENLTLKYNSSTEPVLCGISFHVPPRTRVGIVGRTGAGKSSLTNVLFRLVEPQPGSSIRIDGLDILGMGLQDLR 921 L IV + +I V TP V + I V+ +V R YL+++R LKR+E+V RSPL+ FGE+++G+ IRAY +KRFI+D+ R++ +R Y+YL+ WLA R+ ++G L GA++V + ID+ S GL ++Y + T NV++ RLY+ E N+NS+ER+ EY +V QEAA ++ + RP WPS+G V N T +Y + +PVL +SF + P +VGIVGRTGAGKSSL LFR +E + G I IDG+DI +GLQDLR Sbjct: 1210 LSIVVTVALITVITPGFLVAAILISFVYFFVGRFYLRSSRDLKRIESVQRSPLFQQFGETLSGITTIRAYGEEKRFIRDNMHRINNYSRPYIYLWAANRWLAFRIDVIGDLVAFFAGAFVVFNIGKIDAGSAGLSLSYALSFTENVLWLVRLYSMNEQNMNSVERIKEYLEVEQEAAPIIEKTRPAANWPSEGSVEFVNYTTRYRADLDPVLRDVSFKINPLEKVGIVGRTGAGKSSLALALFRGLEAEEGK-IFIDGVDIGLIGLQDLR 1478
BLAST of mRNA_C-tenellus_contig1075.1.1 vs. uniprot
Match: A0A1L9SMQ2_9EURO (Uncharacterized protein n=1 Tax=Penicilliopsis zonata CBS 506.65 TaxID=1073090 RepID=A0A1L9SMQ2_9EURO) HSP 1 Score: 233 bits (595), Expect = 9.460e-66 Identity = 125/278 (44.96%), Postives = 183/278 (65.83%), Query Frame = 1 Query: 88 TLSIHTKLLGIVGVITVIVVSTPSLAVIVLPILGVFLYVTRRYLKTARSLKRLEAVTRSPLYAHFGESINGMAIIRAYKAQKRFIKDSEERVDALNRAYLYLFCTTFWLASRLRIVGSLACGLVGAYLVGQVNNIDSASGGLVITYTFAITFNVVFSARLYAEMEMNVNSIERLDEYCKVPQEAAAVVPEKRPPGLWPSKGEVHIENLTLKYNSSTEPVLCGISFHVPPRTRVGIVGRTGAGKSSLTNVLFRLVEPQPGSSIRIDGLDILGMGLQDLR 921 T+ + L ++ ++ +I V TP V + I V+ + YL ++R LKRLE+V RSPLY FGE++NG+ IRAY RFI D+ R+++ NR ++YL+ + WLA R+ I G++ A+++ + +ID+ + GL +TY T NV++ RLYAE++ ++NS+ER++EY +V QEAAA++PE RPP WP++G V N T +Y S +PVL G+SF V P +VGIVGRTGAGKSSL LFR +E + G I IDG+DI +GL+DLR Sbjct: 1208 TIGMMHSLASVIMIVVLISVITPGFLVAGVFITMVYTALGIVYLSSSRDLKRLESVQRSPLYQQFGETLNGIVTIRAYGDGPRFIVDNHRRINSYNRPHMYLWASHRWLAFRVDITGAMVSFFSAAFILLNIGSIDAGAAGLALTYAVTFTENVLWLVRLYAEVQQSMNSVERVNEYLEVEQEAAAIIPESRPPPQWPTQGAVQFVNYTTRYRSDLDPVLKGVSFAVQPGEKVGIVGRTGAGKSSLALALFRGLEAEQGQ-ILIDGVDIGRIGLRDLR 1484
BLAST of mRNA_C-tenellus_contig1075.1.1 vs. uniprot
Match: A0A7S3Y0L7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y0L7_HETAK) HSP 1 Score: 223 bits (569), Expect = 1.190e-65 Identity = 115/237 (48.52%), Postives = 158/237 (66.67%), Query Frame = 1 Query: 211 RYLKTARSLKRLEAVTRSPLYAHFGESINGMAIIRAYKAQKRFIKDSEERVDALNRAYLYLFCTTFWLASRLRIVGSLACGLVGAYLVGQVNNIDSASGGLVITYTFAITFNVVFSARLYAEMEMNVNSIERLDEYCKVPQEAAAVVPEKRPPGLWPSKGEVHIENLTLKYNSSTEPVLCGISFHVPPRTRVGIVGRTGAGKSSLTNVLFRLVEPQPGSSIRIDGLDILGMGLQDLR 921 +YL+ +R KRL++V++SP++AHFGE+ G+ +RAY A RF K+S R D RAY Y + WL R+ ++G+ G +++ + ++ + + GLV+TY IT + + R A EM +NS+ER +E+ ++PQEA AVV +RPP WPS+GE+ E LTL Y S+ P L G++F VPPRTRVGIVGRTGAGKSSLT LFRLVEP+ + IDGLDI MGL DLR Sbjct: 100 KYLRVSRETKRLDSVSKSPVFAHFGEAAAGVVTVRAYGAAARFFKESCRRCDENVRAYYYTWVANRWLNVRMELLGAAVSGGAALFVLLALGSMRATTAGLVLTYAVQITSAMAYLVRNQANCEMQMNSVERTEEFSRLPQEAPAVVEGRRPPVDWPSRGELVAEGLTLTYPSAARPALRGLTFRVPPRTRVGIVGRTGAGKSSLTAALFRLVEPE--GRLEIDGLDIRAMGLADLR 334
BLAST of mRNA_C-tenellus_contig1075.1.1 vs. uniprot
Match: A0A2T3ATC4_AMORE (Uncharacterized protein n=1 Tax=Amorphotheca resinae ATCC 22711 TaxID=857342 RepID=A0A2T3ATC4_AMORE) HSP 1 Score: 231 bits (588), Expect = 8.150e-65 Identity = 124/270 (45.93%), Postives = 176/270 (65.19%), Query Frame = 1 Query: 112 LGIVGVITVIVVSTPSLAVIVLPILGVFLYVTRRYLKTARSLKRLEAVTRSPLYAHFGESINGMAIIRAYKAQKRFIKDSEERVDALNRAYLYLFCTTFWLASRLRIVGSLACGLVGAYLVGQVNNIDSASGGLVITYTFAITFNVVFSARLYAEMEMNVNSIERLDEYCKVPQEAAAVVPEKRPPGLWPSKGEVHIENLTLKYNSSTEPVLCGISFHVPPRTRVGIVGRTGAGKSSLTNVLFRLVEPQPGSSIRIDGLDILGMGLQDLR 921 L I+ I +I V TP + + I ++ +V R YL+++R LKRLE+V RSPL+ FGE+++G+ IRAY +KRFI+D+ R++ NR ++YL+ WL+ R+ ++G L GA++V + ID+ S GL ++Y + T NV++ RLYA E N+NS+ER+ EY V QEAA V+ E RP WPS+G V + T +Y S +PVL +SF + PR +VGIVGRTGAGKSSL LFR +E + G I ID +DI +GLQDLR Sbjct: 1213 LAIIVTIALISVITPGFLIAGVFISALYFFVGRFYLRSSRDLKRLESVQRSPLFQQFGETLSGITTIRAYGDEKRFIRDNMLRINTHNRPFIYLWAANRWLSFRIDVIGDLVAFFAGAFVVLSIGRIDAGSAGLSLSYAISFTENVLWLVRLYAVNEQNMNSVERIKEYLDVEQEAAPVIEETRPAANWPSQGSVEFIDYTTRYRSDLDPVLRNVSFKIKPREKVGIVGRTGAGKSSLALALFRGLEAETGK-ILIDDVDIGLIGLQDLR 1481 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig1075.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig1075.1.1 >prot_C-tenellus_contig1075.1.1 ID=prot_C-tenellus_contig1075.1.1|Name=mRNA_C-tenellus_contig1075.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=308bp YSVTCHDLTFPSTTEIPTPPCQSFLSLDTTLSIHTKLLGIVGVITVIVVSback to top mRNA from alignment at C-tenellus_contig1075:38..8405+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig1075.1.1 ID=mRNA_C-tenellus_contig1075.1.1|Name=mRNA_C-tenellus_contig1075.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=8368bp|location=Sequence derived from alignment at C-tenellus_contig1075:38..8405+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig1075:38..8405+ >mRNA_C-tenellus_contig1075.1.1 ID=mRNA_C-tenellus_contig1075.1.1|Name=mRNA_C-tenellus_contig1075.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=924bp|location=Sequence derived from alignment at C-tenellus_contig1075:38..8405+ (Choristocarpus tenellus KU2346)back to top |