mRNA_C-tenellus_contig10653.2.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10653.2.1 vs. uniprot
Match: A0A836C6X3_9STRA (BZIP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6X3_9STRA) HSP 1 Score: 200 bits (508), Expect = 1.420e-59 Identity = 105/193 (54.40%), Postives = 130/193 (67.36%), Query Frame = 1 Query: 4 KSQDRERNRLHARNTRARKKQYVEELQHQLEILSAEQDAAAAKHDTAMNEVMERQDAWRHVVRKVFDLRAEACLDENKWGEVLCEDFLLTLPVTPYRSFSPSDMVNNRCVRLGISGMIADTQSLAVACDNIGFKTLDKESRVDIEYLIGSDR-NRAFYSDDGFMCTFLMRTTNAMEHGALVEVEKSGMIRTRF 579 K Q+RERNR+HARNTRARKK Y +EL +L L+ E++ A +Q AW +R+ DLRA CLDE +W ++L EDF +T+PVTPYRSFSPSD+VNNR V LG+ GM+ADT SL V DNIG KT E RV +EYL+GSD F+ G MCTF+MRT +A HGA E EKSG++R RF Sbjct: 54 KKQERERNRMHARNTRARKKAYADELTAKLAALTKEKEEHEKAEAEASKARTVQQSAWAATLRQAMDLRAAGCLDEAQWSKILAEDFKMTMPVTPYRSFSPSDVVNNRRVLLGVDGMVADTASLQVMLDNIGTKTRKNEGRVRVEYLLGSDAAENCFFGAAGLMCTFMMRTLDAKAHGAACECEKSGILRARF 246
BLAST of mRNA_C-tenellus_contig10653.2.1 vs. uniprot
Match: A0A6H5K0R4_9PHAE (PAS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0R4_9PHAE) HSP 1 Score: 176 bits (446), Expect = 9.270e-50 Identity = 99/195 (50.77%), Postives = 130/195 (66.67%), Query Frame = 1 Query: 1 KKSQDRERNRLHARNTRARKKQYVEELQHQLEILSAEQDAAAAKHDTAMNEVMERQDAWRHVVRKVFDLRAEACLDENKWGEVLCEDFLLTLPVTPYRSFSPSDMVNNRCVRLGISGMIADTQSLAVACDNIGFKTLDKESRVDIEYLIGSDRNR--AFYSDDGFMCTFLMRTTNAMEHGALVEVEKSGMIRTRF 579 KK DRERNR AR +R KKQ +++Q QL L E AAA+ A ++ + + A +RKVFDLRA+ C DE W EVL D +T+P+TPYRSF+P+D+VNNR V LG+ GMI+DTQSL+V DNIG KT ES V I++ + SD + AF+S DG MC+F MRT +A++H A E E +GM+R RF Sbjct: 90 KKLMDRERNRRQARKSRELKKQCADKMQQQLIQLEKESAEAAAREKEAAKKLKDCRTARCQALRKVFDLRADGCTDEASWLEVLSPDLRMTMPITPYRSFNPADVVNNRRVLLGVDGMISDTQSLSVLLDNIGVKTRLYESPVSIKFTLASDADEGGAFFSRDGLMCSFTMRTLDAVKHAARREWEVNGMVRVRF 284
BLAST of mRNA_C-tenellus_contig10653.2.1 vs. uniprot
Match: A0A6H5KLB1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLB1_9PHAE) HSP 1 Score: 139 bits (351), Expect = 3.070e-37 Identity = 85/210 (40.48%), Postives = 118/210 (56.19%), Query Frame = 1 Query: 19 ERNRLHARNTRARKKQYVEELQHQLEILSAEQDAAAAKHDTAMNEVMERQDAWRHVVRKVFDLRAEACLDENKWGEVLCEDFLLTLPVTPYRSFSPSDMVNNRC-VRLGISGMIADTQSLAVACDNIGFKTLDK----------------------ESRVDIEYLIGSDRNRAFYSDDGFMCTFLMRTTNAMEHGALVEVEKSGMIRTRF 579 ERNRLHARNTRARKKQY+EEL+ ++E L A++ AA + E E+ W ++ V DLR + +D W EVL EDF L+LP+TPYR F P+D+ R V +G+ GMI+DT SL C+N+ + K RV ++ + S+ + F SD G MC F M T +A + G+ +EVEK+GM+R F Sbjct: 59 ERNRLHARNTRARKKQYMEELKDKVESLHAKRAAAEHNKEXXXREDEEKIARWAATLKNVLDLRCQGVVDPAVWNEVLTEDFELSLPLTPYRKFDPADVEGGRRRVLVGVEGMISDTASLTEMCENLAERCRQKGGLSPPXXXXXXXXXXXXXQPPRPRVHLKSCV-SNGDMVFSSDRGIMCVFSMTTVDACDFGSPLEVEKNGMLRATF 267
BLAST of mRNA_C-tenellus_contig10653.2.1 vs. uniprot
Match: A0A7S2B104_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B104_9STRA) HSP 1 Score: 118 bits (296), Expect = 1.430e-27 Identity = 70/190 (36.84%), Postives = 107/190 (56.32%), Query Frame = 1 Query: 16 RERNRLHARNTRARKKQYVEELQHQLEILSAEQDAAAAKHDTAMNEVMERQ--DAWRHVVRKVFDLRAEACLDENKWGEVLCEDFLLTLPVTPYRSFSPSDMVNNRCVRLGISGMIADTQSLAVACDNIGFKTLDKESRVDIEYLIGSDRNRAFYSDDGFMCTFLMRTTNAMEHGALVEVEKSGMIRTRF 579 R+RNR HARNTR RKK Y+E+L+ +++LS E + D +EV E + + V++++ + R ++ KW VL +DF +TLP+TP+R F+P+++V R V G+SGMI DT S V +IG + V++ + + +D FM + M TTNAM GAL E GM++ F Sbjct: 251 RDRNREHARNTRLRKKAYIEKLKQTVQVLSKECETIT--RDNQQDEVNETEILEQRHQVIQRMMNYRTSGVVNPEKWQAVLAQDFTMTLPITPHRFFNPNEVVGCRRVVRGVSGMIQDTASFKVLISSIGRRKYRGHGEVEVNFNMPD--GETVIKNDLFMTRWTMSTTNAMSKGALAECSLEGMLKATF 436
BLAST of mRNA_C-tenellus_contig10653.2.1 vs. uniprot
Match: A0A836CN81_9STRA (BZIP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN81_9STRA) HSP 1 Score: 117 bits (294), Expect = 2.060e-27 Identity = 73/188 (38.83%), Postives = 104/188 (55.32%), Query Frame = 1 Query: 16 RERNRLHARNTRARKKQYVEELQHQLEILSAEQDAAAAKHDTAMNEVMERQDAWRHVVRKVFDLRAEACLDENKWGEVLCEDFLLTLPVTPYRSFSPSDMVNNRCVRLGISGMIADTQSLAVACDNIGFKTLDKESRVDIEYLIGSDRNRAFYSDDGFMCTFLMRTTNAMEHGALVEVEKSGMIRTRF 579 R+RNR HARNTR RKK Y+EEL+ ++ L+AE+DAAAA + Q V++ RA W L E F LP+TPYRSF +++V+ + + +GI MIAD SLA+ +++G + E RV ++Y G + A S D C +++RT NA GAL E GM+R R+ Sbjct: 118 RDRNRKHARNTRLRKKAYIEELERTVQQLTAERDAAAAAKAAEGARAAQLQSVRFSVLQMALFYRAAGNTCRADWATALEESFTCVLPITPYRSFPSAEVVSGQRMIVGIDAMIADVASLALMVESVG-RCRPSERRVQVQYYAGPED--AITSGDMLSCRWMLRTENAAACGALCECHAQGMLRARY 302
BLAST of mRNA_C-tenellus_contig10653.2.1 vs. uniprot
Match: A0A7S2DLD9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DLD9_9STRA) HSP 1 Score: 112 bits (280), Expect = 1.120e-25 Identity = 74/193 (38.34%), Postives = 108/193 (55.96%), Query Frame = 1 Query: 16 RERNRLHARNTRARKKQYVEELQHQLEILSAEQDAAAAKH--DTAMNEVMERQDAWRHVVRKVFDLRAEACLDENKWGEVLCEDFLLTLPVTPYRSFSPSDMVNNRCVRLGISGMIADTQSLAVACD---NIGFKTLDKESRVDIEYLIGSDRNRAFYSDDGFMCTFLMRTTNAMEHGALVEVEKSGMIRTRF 579 RERNR HAR TR RKK+Y+E L+ QLE LSA Q+AA K D + + + D W ++ LRA A D+++W + ++ +L P+TPYRS+ +D+++NRCV +GI +I D SL +A N G + +V + + I D Y ++G MC F MR++N G EV K G +R F Sbjct: 127 RERNRRHARETRLRKKEYMETLKSQLEQLSA-QNAALEKQIKDKRLGQDA-KHDLWITKLQGALALRASAEPDQSRWRNFVDDEIVLVHPITPYRSYRSADVISNRCVLMGIQDIIDDAASLLIALAGLCNEGIHDGTRNQKVQLRFNI--DEQGMHYREEGIMCPFDMRSSNLTPLGLKSEVNKRGCLRAIF 315
BLAST of mRNA_C-tenellus_contig10653.2.1 vs. uniprot
Match: A0A7S4D930_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D930_HETAK) HSP 1 Score: 107 bits (266), Expect = 6.350e-24 Identity = 62/191 (32.46%), Postives = 106/191 (55.50%), Query Frame = 1 Query: 19 ERNRLHARNTRARKKQYVEELQHQLEILSAEQDAAAAKHDTAMNEVMERQDAWRHVVRKVFDLRAEACLDENKWGEVLCEDFLLTLPVTPYRSFSPSDMVNNRCVRLGISGMIADTQSLAVACDNIGFKTLD-KESRVD---IEYLIGSDRNRAFYSDDGFMCTFLMRTTNAMEHGALVEVEKSGMIRTRF 579 +RNR HAR TR RKK Y+++L+ + L++ ++ + + + E+Q R VV + +LR + D +W ++L E F T P+TPY+SF+ S+++N+ V GI + DT S V ++IG T +ES++ + + D + D MC+F ++T NA+E GA E + GM++ +F Sbjct: 151 DRNREHARMTRLRKKIYIDKLKRLAQDLTSNKERQEREEKILESRLAEQQSIRRRVVEALMELRVQVIQDRVQWSKILDEAFTFTQPITPYQSFNRSEIMNSSRVLFGIDACLRDTASFGVMANSIGIGTAKWRESQLQGKPVRLISSIDVDSVILKGDVLMCSFEVKTDNAVESGAFCECYQQGMLQCKF 341
BLAST of mRNA_C-tenellus_contig10653.2.1 vs. uniprot
Match: B7GCQ4_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GCQ4_PHATC) HSP 1 Score: 107 bits (268), Expect = 1.070e-23 Identity = 69/192 (35.94%), Postives = 110/192 (57.29%), Query Frame = 1 Query: 13 DRERNRLHARNTRARKKQYVEELQHQLEILSAEQDAAAAKHDTAMNEVMERQDAWRHVVRKVFDLRAEACLDENKWGEVLCED-FLLTLPVTPYRSFSPSDMVNNRCVR--LGISGMIADTQSLAVACDNIGFKTLDKESRVDIEYLIGSDRNRAFYSDDGFMCTFLMRTTNAMEHGALVEVEKSGMIRTRF 579 +R+RNR HA+NTR RKK ++EEL+ ++ L E+D ++ A + ++E + V+ F LR+ W +L E F +PVTPYRSF S++ ++C R LGI GMIADT S+ V D+I + E +++ Y + ++ A + + M ++M TTNA++ GA +EV K GM+ +F Sbjct: 436 NRDRNREHAKNTRMRKKAFLEELKTTVDDLCQERDTLVSERTCAASVMVEMHNTRTEVLMSFFALRSTNEKRRELWASILDESCFTCAVPVTPYRSFPASEVQASKCQRTILGIDGMIADTASINVLFDSIVDRKKYPEGKIEFRYTLVTEE--AVVAGNQMMARWVMTTTNAVQCGAKMEVAKQGMLCCKF 625
BLAST of mRNA_C-tenellus_contig10653.2.1 vs. uniprot
Match: A0A6H5KUH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUH5_9PHAE) HSP 1 Score: 105 bits (262), Expect = 5.870e-23 Identity = 73/191 (38.22%), Postives = 107/191 (56.02%), Query Frame = 1 Query: 13 DRERNRLHARNTRARKKQYVEELQHQL-EILSAE-QDAAAAKHDTAMNEVMERQDAWRHVVRKVFDLRAEACLDENKWGEVLCEDFLLTLPVTPYRSFSPSDMVNNRCVRLGISGMIADTQSLAVACDNIGFKTLDKESRVDIEYLIGSDRNRAFYSDDGFMCTFLMRTTNAMEHGALVEVEKSGMIRTRF 579 +R RNR HARNTR RKKQYVE L+ Q+ E+L A+ Q+ A+ +T+ ++ ++ A R +V + L+A L W VL + F P+TP+RSF PS+ + + GI GMI DT SLAV +I ++ + R ++Y + + MC +LM+T NA E GAL +V GM+R F Sbjct: 235 NRVRNREHARNTRMRKKQYVESLKLQVGEMLQAKAQEERDAQLETS--KISAKRTAMRQMVLNILYLKATEELSPRSWACVLDDGFTCVCPITPFRSFPPSEAQEDHRLITGIEGMIQDTASLAVFIKSICPRSRNPTGRK-LKYQFYTSPEDTVVGSNALMCQWLMKTDNATECGALCDVFSHGMLRAHF 422
BLAST of mRNA_C-tenellus_contig10653.2.1 vs. uniprot
Match: A0A7S3YIB3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YIB3_HETAK) HSP 1 Score: 102 bits (253), Expect = 2.030e-22 Identity = 71/204 (34.80%), Postives = 110/204 (53.92%), Query Frame = 1 Query: 10 QDRERNRLHARNTRARKKQYVEELQHQLEILSAEQDAAA------AKHDTAMNEVMERQDAWRHVVRKVFDLRAEACLDENKWGEVLCEDFLLTLPVTPYRSFSPSDMVNNRCVRLGISGMIADTQSLAVACDNIG-----FKTLDKES---RVDIEYLIGSDRNRAFYSDDGFMCTFLMRTTNAMEHGALVEVEKSGMIRTRF 579 Q+R+RNR HARNTR RKK +V+EL+ Q++ L+A ++ ++ AMNE+ + V+ D R D + W +L E F++ +P+TPYRSF S + + GI ++AD SL V DN+G +K + K RV+++Y I ++ D M + M+T+NAM GAL E++ GM+R F Sbjct: 119 QNRDRNREHARNTRLRKKAFVDELKKQVQDLAAAREREERERHLESQRSAAMNEIRFQ------VLATFLDYRGRGVKDLSLWSSILDEQFMMRMPLTPYRSFPQSQVQDGARKVKGIEDVLADVASLQVMLDNLGKNTEKWKQVTKSPNTPRVEMKYKI--NQKELLVQGDMIMANWNMQTSNAMARGALAELKLYGMLRCAF 314 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10653.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10653.2.1 >prot_C-tenellus_contig10653.2.1 ID=prot_C-tenellus_contig10653.2.1|Name=mRNA_C-tenellus_contig10653.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=193bp KKSQDRERNRLHARNTRARKKQYVEELQHQLEILSAEQDAAAAKHDTAMNback to top mRNA from alignment at C-tenellus_contig10653:976..2758- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10653.2.1 ID=mRNA_C-tenellus_contig10653.2.1|Name=mRNA_C-tenellus_contig10653.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1783bp|location=Sequence derived from alignment at C-tenellus_contig10653:976..2758- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10653:976..2758- >mRNA_C-tenellus_contig10653.2.1 ID=mRNA_C-tenellus_contig10653.2.1|Name=mRNA_C-tenellus_contig10653.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=579bp|location=Sequence derived from alignment at C-tenellus_contig10653:976..2758- (Choristocarpus tenellus KU2346)back to top |