mRNA_C-tenellus_contig10634.1.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig10634.1.1
Unique NamemRNA_C-tenellus_contig10634.1.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig10634.1.1 vs. uniprot
Match: A0A836CAT4_9STRA (Raptor_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAT4_9STRA)

HSP 1 Score: 201 bits (510), Expect = 2.550e-52
Identity = 119/244 (48.77%), Postives = 149/244 (61.07%), Query Frame = 1
Query:   16 NQNPAGSRMTSMAWINSTQDSLLLTGADDGIVRVWDGLLQAGTGGPGGMPPPRLVTALDAAPGMRMGQ-SSGLVADWQQETGLLFTGGAGVHLKAWDLGREQYWANWEVPEDTAVTG------GRGTGGYGGNGSSALSSNVGSVMAGFVDGSVRLYDARE-RRAVQNFLEHDSWIVNLHLTKE---YEMRSACLSGTVRVWDIRKESKPIKSIVVQRSSMTALTVHNRVPIMASGSHNQFIKV 714
            N +P G+RMT++ W+N    SLLL G+DDG+VR+WDGL++ G         PRLV+A  AAP +  GQ  SGLV  WQQ TGLL+ GG+   L+ WD+ REQ WA W       VT           GG      + L    G+V+AG  DG++RLYD RE  R  + F EH SWIV+LH T+    +EM SAC +G VR WDIR     + ++ VQRS MTAL  H RVPI+ASGSHNQFIKV
Sbjct: 1356 NGHPCGARMTALHWLNPAARSLLLVGSDDGVVRIWDGLVEGGA--------PRLVSAFAAAPDIVPGQRGSGLVTHWQQSTGLLYCGGSSARLRVWDVAREQAWAQWPAAPGGCVTALAAPLTAELRGGXXXX-XAPLGDAAGAVVAGHGDGAIRLYDPREGTRPCRAFAEHGSWIVSLHFTRGMGGHEMLSACAAGDVRFWDIRMAGS-LSAMSVQRSPMTALAAHARVPILASGSHNQFIKV 1589          
BLAST of mRNA_C-tenellus_contig10634.1.1 vs. uniprot
Match: A0A225X3J7_9STRA (Raptor_N domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X3J7_9STRA)

HSP 1 Score: 164 bits (415), Expect = 6.560e-40
Identity = 98/242 (40.50%), Postives = 146/242 (60.33%), Query Frame = 1
Query:    7 SFCNQNPAGSRMTSMAWINSTQDSLLLTGADDGIVRVWDGLLQAGTGGPGGMPPPRLVTALDAAPGMRMG-QSSGLVADWQQETGLLFTGGAGVHLKAWDLGREQYWANWEVPEDTAVTGGRGTGGYGGNGSSALSSNV-GSVMAGFVDGSVRLYDARERR--AVQNFL-EHDSWIVNLHL-TKEYEMRSACLSGTVRVWDIRKESKPIKSIVVQRSSMTALTVHNRVPIMASGSHNQFIKV 714
            SF N+NP GSR+TS+ WIN T++SLL+ G+DDG+++V+ GL          +  P+LV+A  A P +  G + SGLV +WQQ++G+++ GG    L+ WDL +E+         D+ +T            S A   ++ G ++AGF DG++RL+DAR R   AV+  + EH SW+V  H+     E+ +  ++G ++ WD+R     +KS+   RS MTAL VH+  PI ASGSHNQFIKV
Sbjct: 1182 SFGNKNPPGSRLTSLNWINETEESLLVCGSDDGVIKVYHGLHSPHPS----IESPKLVSAFVAVPDLVPGTRGSGLVMNWQQDSGMMYAGGNSSVLRGWDLRQEKCTVALPTQTDSCIT------------SMASDESIPGMLVAGFGDGTLRLFDARSRPDYAVKTIMKEHTSWVVQTHIYAGRNELLTGSVTGELKFWDMRYPKNSVKSLEAHRSPMTALAVHDYAPIFASGSHNQFIKV 1407          
BLAST of mRNA_C-tenellus_contig10634.1.1 vs. uniprot
Match: F0W2J7_9STRA (Predicted protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W2J7_9STRA)

HSP 1 Score: 163 bits (412), Expect = 1.630e-39
Identity = 102/243 (41.98%), Postives = 136/243 (55.97%), Query Frame = 1
Query:   10 FCNQNPAGSRMTSMAWINSTQDSLLLTGADDGIVRVWDGLLQAGTGGPGGMPP--PRLVTALDAAPGMRMG-QSSGLVADWQQETGLLFTGGAGVHLKAWDLGREQYWANWEVPEDTAVTGGRGTGGYGGNGSSALSSNVGS-VMAGFVDGSVRLYDARERRAV---QNFLEHDSWIVNLHLTKE-YEMRSACLSGTVRVWDIRKESKPIKSIVVQRSSMTALTVHNRVPIMASGSHNQFIKV 714
            F N NP GSR+TS++WIN   + LL  G+DDG+++++ GL          M P  P+L+TA  A P +  G + SGL+  WQQ TG+LF GG    L+ W+L  E+   N     D+ +T            S +   +V   V+AGF DG +RL+D R R  V       EH SW+V  HL K  YEM S  +SG ++ WD+R      K +   RS+MTAL VH+ VPI ASGSHNQFIKV
Sbjct: 1255 FSNNNPTGSRLTSLSWINENAEGLLTCGSDDGVIKIYHGLHTPH------MSPSSPQLLTAFTAVPDLVPGTRGSGLITAWQQSTGMLFAGGYSNSLRGWNLEYEKCVFNLPTYTDSCIT------------SMSTDESVSDIVVAGFGDGKLRLFDPRCRPEVAIRMTMQEHTSWVVQTHLYKSRYEMLSGSVSGELKFWDLRHPRNSTKFLETHRSTMTALAVHDYVPIFASGSHNQFIKV 1479          
BLAST of mRNA_C-tenellus_contig10634.1.1 vs. uniprot
Match: A0A024GJC1_9STRA (Raptor_N domain-containing protein n=5 Tax=Albugo candida TaxID=65357 RepID=A0A024GJC1_9STRA)

HSP 1 Score: 162 bits (411), Expect = 2.200e-39
Identity = 100/241 (41.49%), Postives = 136/241 (56.43%), Query Frame = 1
Query:   10 FCNQNPAGSRMTSMAWINSTQDSLLLTGADDGIVRVWDGLLQAGTGGPGGMPPPRLVTALDAAPGMRMG-QSSGLVADWQQETGLLFTGGAGVHLKAWDLGREQYWANWEVPEDTAVTGGRGTGGYGGNGSSALSSNVGS-VMAGFVDGSVRLYDARERRAV---QNFLEHDSWIVNLHLTKE-YEMRSACLSGTVRVWDIRKESKPIKSIVVQRSSMTALTVHNRVPIMASGSHNQFIKV 714
            F N NP GSR+TS++WIN   +SLL  G+DDG+++V+ GL             P+L+TA  A P +  G + SGL+  WQQ TG+LF GG    ++ W+L  E+   N     D+ +T            S +   ++   V+AGF DG +RL+D+R R  V       EH SWIV  HL K  YEM S  +SG ++ WD+R      K +  +RS+MTAL VH+  PI ASGSHNQFIKV
Sbjct: 1258 FSNNNPTGSRLTSLSWINENAESLLTCGSDDGVIKVYHGLHTPQMSSSA----PQLLTAFTAVPDLVPGTRGSGLITAWQQATGVLFAGGYSNSVRGWNLEYEKCVFNLPTYTDSCIT------------SMSTDESISDIVVAGFGDGKLRLFDSRCRPEVAIRMTMQEHTSWIVQTHLYKNRYEMLSGSVSGELKFWDLRHPRNSTKFLETRRSTMTALAVHDYAPIFASGSHNQFIKV 1482          
BLAST of mRNA_C-tenellus_contig10634.1.1 vs. uniprot
Match: A0A6A3UUR4_9STRA (Uncharacterized protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3UUR4_9STRA)

HSP 1 Score: 157 bits (396), Expect = 2.910e-39
Identity = 93/242 (38.43%), Postives = 142/242 (58.68%), Query Frame = 1
Query:    7 SFCNQNPAGSRMTSMAWINSTQDSLLLTGADDGIVRVWDGLLQAGTGGPGGMPPPRLVTALDAAPGMRMG-QSSGLVADWQQETGLLFTGGAGVHLKAWDLGREQYWANWEVPEDTAVTGGRGTGGYGGNGSSALSSNV-GSVMAGFVDGSVRLYDARERR--AVQNFL-EHDSWIVNLHL-TKEYEMRSACLSGTVRVWDIRKESKPIKSIVVQRSSMTALTVHNRVPIMASGSHNQFIKV 714
            SF N+NP GSR+TS+ WIN  ++SLL  G+DDG+++++ GL          +  P+L++A  A P +  G + SGLV +WQQ+ G ++ GG    L+ WDL +E+         D+ +T            S A   ++ G V+AGF DG++R++D+R R   +V+  + EH SW+V  H+     E+ +  ++G ++ WD+R     +KS+   RS MTAL VH+  PI ASGSHNQFIKV
Sbjct:  165 SFGNKNPPGSRLTSLNWINEAEESLLTCGSDDGVIKIYHGLHSPHPS----IDSPKLLSAFVAVPDLVPGTRGSGLVMNWQQQAGAMYAGGNSSMLRGWDLRQEKCTVALPTQTDSCIT------------SMASDESIPGMVVAGFGDGTLRIFDSRSRPDYSVKTIMREHASWVVQTHIYAGRNELLTGSVTGELKFWDLRYPKNSVKSLEAHRSPMTALAVHDYAPIFASGSHNQFIKV 390          
BLAST of mRNA_C-tenellus_contig10634.1.1 vs. uniprot
Match: A0A2D4CI46_PYTIN (Regulatory-associated protein of mTOR n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CI46_PYTIN)

HSP 1 Score: 161 bits (408), Expect = 5.090e-39
Identity = 101/244 (41.39%), Postives = 140/244 (57.38%), Query Frame = 1
Query:   10 FCNQNPAGSRMTSMAWINSTQDSLLLTGADDGIVRVWDGLLQAGTGGPGGMPP-PRLVTALDAAPGMRMG-QSSGLVADWQQETGLLFTGGAGVHLKAWDLGREQYWANWEVPEDTAVTGGRGTGGYGGNGSSALSSN---VGSVMAGFVDGSVRLYDARERRAVQ---NFLEHDSWIVNLHL-TKEYEMRSACLSGTVRVWDIRKESKPIKSIVVQRSSMTALTVHNRVPIMASGSHNQFIKV 714
            F N+NP GSR+TS++WIN T++ LL  G+DDG+VR++ GL       P   P  PRL++A  A P +    + SGLV+ WQQ  G+LF GG    L+ W++ +E+         D+ VT               L+S+    G V+AGF DG++RL+DAR R          EH SW+V  HL   +YE+ S  +SG ++ WD+R     ++S+   RS MTAL VH+  PI ASGSHNQFIKV
Sbjct: 1023 FGNKNPTGSRLTSLSWINETEECLLTCGSDDGVVRIYQGLHT-----PHPSPSAPRLLSAFVAMPDLVPDTRGSGLVSTWQQHAGVLFAGGNSSVLRGWNMRQERCTFRVPTHTDSCVT--------------TLASDELTTGQVVAGFGDGTLRLFDARSRPDAALTCTMREHSSWVVQTHLYAGKYELLSGSVSGELKFWDLRFPKLSVRSLEAHRSPMTALAVHDYAPIFASGSHNQFIKV 1247          
BLAST of mRNA_C-tenellus_contig10634.1.1 vs. uniprot
Match: A0A4D9DFT2_9STRA (Raptor_N domain-containing protein n=5 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DFT2_9STRA)

HSP 1 Score: 160 bits (406), Expect = 1.040e-38
Identity = 97/239 (40.59%), Postives = 134/239 (56.07%), Query Frame = 1
Query:   34 SRMTSMAWINSTQDSLLLTGADDGIVRVWDGLLQAGTGGPGGMPPPRLVTALDAAPGMRMGQSSGLVADWQQETGLLFTGGAGVHLKAWDLGREQYWANWEVPEDTAVT-----------GGRGTGGYGGNGSSALSSNVGSVMAGFVDGSVRLYDARERRAVQNFLEHDSWIVNLHLTK-EYEMRSACLSGTVRVWDIRKESKPIKSIVVQRSSMTALTVHNRVPIMASGSHNQFIKV 714
            SR+TS+AW+N    SLLLTG D+G+VRVW G++  G        PPRL TA  A     +G+  G+V  W    GLL TGG+   L+AWDL REQ    WE   +  VT           GGR +GG G  GS   SS +  V+AGF DG  +++D R  + V    EH  W+V     K + E+ +  L+G VR WD+R+    ++++ V +  MTA+  H   P++ASGS+NQFIK+
Sbjct: 1544 SRITSLAWLNEATSSLLLTGTDEGVVRVWSGVVPTGAD----WVPPRLATAFFAH--ALVGRGFGVVTKWVHGEGLLLTGGSSDRLRAWDLEREQMVREWETGGEACVTCLAASTPHGGAGGRDSGGNGARGSQISSSPL--VVAGFGDGKGKIWDVRVDKCVGVLTEHQQWLVLTDFVKGDRELLTGSLTGEVRAWDLRRLKTSLRTMNVGKGPMTAMAAHQTCPLLASGSYNQFIKM 1774          
BLAST of mRNA_C-tenellus_contig10634.1.1 vs. uniprot
Match: H3G5Z2_PHYRM (Raptor_N domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=H3G5Z2_PHYRM)

HSP 1 Score: 160 bits (405), Expect = 1.220e-38
Identity = 94/241 (39.00%), Postives = 144/241 (59.75%), Query Frame = 1
Query:    7 SFCNQNPAGSRMTSMAWINSTQDSLLLTGADDGIVRVWDGLLQAGTGGPGGMPPPRLVTALDAAPGMRMG-QSSGLVADWQQETGLLFTGGAGVHLKAWDLGREQYWANWEVPEDTAVTGGRGTGGYGGNGSSALSSNVGSVMAGFVDGSVRLYDARERR--AVQNFL-EHDSWIVNLHL-TKEYEMRSACLSGTVRVWDIRKESKPIKSIVVQRSSMTALTVHNRVPIMASGSHNQFIKV 714
            SF N+NP GSR+TS+ WIN T++SLL  G+DDG+++++ GL          +  P+L++A  A P +  G + SGLV +WQQ+ G+++ GG    L+ W+L +E+         D+ +T             ++  S+ G V+AGF DG++R++DAR R   AV+  + EH SW+V  H+     E+ +  ++G ++ WD+R     +KS+   RS MTAL VH+  PI ASGSHNQFIKV
Sbjct:  949 SFGNKNPPGSRLTSLNWINETEESLLTCGSDDGVIKIYHGLHNPHPS----IGSPKLLSAFVAVPDLVPGTRGSGLVMNWQQDAGMMYAGGNSSVLRGWNLRQEKCTVALPTQTDSCITS-----------MASDDSSPGMVVAGFGDGTLRIFDARSRPDYAVKTIMKEHTSWVVQTHIYAGRNELLTGSVTGELKFWDMRYPKNSVKSLEAHRSPMTALAVHDYAPIFASGSHNQFIKV 1174          
BLAST of mRNA_C-tenellus_contig10634.1.1 vs. uniprot
Match: K3WJU9_GLOUD (Raptor_N domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WJU9_GLOUD)

HSP 1 Score: 160 bits (404), Expect = 1.770e-38
Identity = 92/240 (38.33%), Postives = 140/240 (58.33%), Query Frame = 1
Query:   10 FCNQNPAGSRMTSMAWINSTQDSLLLTGADDGIVRVWDGLLQAGTGGPGGMPPPRLVTALDAAPGMRMG-QSSGLVADWQQETGLLFTGGAGVHLKAWDLGREQYWANWEVPEDTAVTGGRGTGGYGGNGSSALSSNVGSVMAGFVDGSVRLYDARER---RAVQNFLEHDSWIVNLHL-TKEYEMRSACLSGTVRVWDIRKESKPIKSIVVQRSSMTALTVHNRVPIMASGSHNQFIKV 714
            F N+NPAGSR+TS+ WIN +++SLL  G+DDG+++++ GL             P+L+++  A P +  G + SGL+ +WQQ  G+ F GG   +L+ W+L +E+   +     D+ +T             ++  +  G+++AGF DG++RL+DAR R          EH SW+V  H+   + EM S  +SG ++ WD+R     +KS+   RS MTAL VH+  PI ASGSHNQFIKV
Sbjct: 1211 FGNKNPAGSRLTSLNWINESEESLLTCGSDDGVIKIYHGLHSPQPH----QTSPKLLSSFVAVPDLVPGTRGSGLITNWQQNAGMFFAGGNSSYLRGWNLRQERCTFSLPTQTDSCITS-----------MTSDETTGGTLVAGFGDGTLRLFDARSRPEYAVKMTMKEHTSWVVQTHVYAGKNEMLSGSVSGELKFWDLRYPRTSVKSLEAHRSPMTALAVHDYAPIFASGSHNQFIKV 1435          
BLAST of mRNA_C-tenellus_contig10634.1.1 vs. uniprot
Match: A0A1E7EQB5_9STRA (WD40 repeat-like protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EQB5_9STRA)

HSP 1 Score: 159 bits (402), Expect = 3.080e-38
Identity = 98/259 (37.84%), Postives = 143/259 (55.21%), Query Frame = 1
Query:    7 SFCNQNPAGSRMTSMAWINSTQDSLLLTGADDGIVRVWDGLLQAGTGGPGGMPPPRLVTALDAAPGMRMGQ--SSGLVADWQQETGLLFTGGAGVHLKAWDLGREQYWANWEVP-------------EDTAVTGGRGTGGYGGNGSSALSSNVGSVMAGFVDGSVRLYDARERRAVQNFLEHDSWIVNLHLTK-------EYEMRSACLSGTVRVWDIRKESKP-IKSIVVQRSSMTALTVHNRVPIMASGSHNQFIKV 714
            SF N NP GSRMT+  WIN +  SLL  G DDG  R+W+G+++    G      P L ++  A P M  GQ  SSGL+ +WQQ TG L +GG   HL+ WD+  E+   + ++              ED A +    + G+ G G          ++AG  DG+++L+D R  +    F EH SWIV++  +        + E+ S  ++G +R WDIR  S+  +++I VQRS MTAL+VH ++PI A+GSH QFIK+
Sbjct: 1010 SFKNGNPTGSRMTTAFWINESSTSLLFVGCDDGSARIWNGIVE--NNGQISGQAPTLASSFFAIPDMEPGQRSSSGLICEWQQTTGTLISGGNSRHLRCWDMTAEKCSTSIDIDTNSCITALTTAWDEDEAYSAVHNSNGFRGTGPEI-------IVAGLSDGTLKLFDIRTPKTGATFNEHGSWIVDVSFSSFGSSGGSQNEILSGSVAGDIRAWDIRSSSRSSLRAIEVQRSPMTALSVHKKIPIAATGSHAQFIKI 1259          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10634.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CAT4_9STRA2.550e-5248.77Raptor_N domain-containing protein n=1 Tax=Tribone... [more]
A0A225X3J7_9STRA6.560e-4040.50Raptor_N domain-containing protein n=1 Tax=Phytoph... [more]
F0W2J7_9STRA1.630e-3941.98Predicted protein putative n=1 Tax=Albugo laibachi... [more]
A0A024GJC1_9STRA2.200e-3941.49Raptor_N domain-containing protein n=5 Tax=Albugo ... [more]
A0A6A3UUR4_9STRA2.910e-3938.43Uncharacterized protein n=1 Tax=Phytophthora fraga... [more]
A0A2D4CI46_PYTIN5.090e-3941.39Regulatory-associated protein of mTOR n=1 Tax=Pyth... [more]
A0A4D9DFT2_9STRA1.040e-3840.59Raptor_N domain-containing protein n=5 Tax=Monodop... [more]
H3G5Z2_PHYRM1.220e-3839.00Raptor_N domain-containing protein n=5 Tax=Phytoph... [more]
K3WJU9_GLOUD1.770e-3838.33Raptor_N domain-containing protein n=1 Tax=Globisp... [more]
A0A1E7EQB5_9STRA3.080e-3837.84WD40 repeat-like protein n=1 Tax=Fragilariopsis cy... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig10634contigC-tenellus_contig10634:1566..4122 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog115417.EPrPW00000018887
PFAMsHEAT,Raptor_N
Model size1415
Max annot lvl121069|Pythiales
Hectar predicted targeting categoryother localisation
Exons4
Evalue1.72e-39
EggNOG OGsKOG1517@1|root,KOG1517@2759|Eukaryota,1MG3W@121069|Pythiales
Ec32 ortholog descriptionWD40/YVTN repeat-like-containing domain
Ec32 orthologEc-27_000220.1
DescriptionRegulatory-associated protein of mTOR. Source PGD
Cds size1113
COG categoryD
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig10634.1.1prot_C-tenellus_contig10634.1.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig10634 1605..3859 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789141.8492012-UTR-C-tenellus_contig10634:1565..16041680789141.8492012-UTR-C-tenellus_contig10634:1565..1604Choristocarpus tenellus KU2346UTRC-tenellus_contig10634 1566..1604 +
1680789141.9028962-UTR-C-tenellus_contig10634:3859..41221680789141.9028962-UTR-C-tenellus_contig10634:3859..4122Choristocarpus tenellus KU2346UTRC-tenellus_contig10634 3860..4122 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789141.85914-CDS-C-tenellus_contig10634:1604..17661680789141.85914-CDS-C-tenellus_contig10634:1604..1766Choristocarpus tenellus KU2346CDSC-tenellus_contig10634 1605..1766 +
1680789141.871113-CDS-C-tenellus_contig10634:2493..26521680789141.871113-CDS-C-tenellus_contig10634:2493..2652Choristocarpus tenellus KU2346CDSC-tenellus_contig10634 2494..2652 +
1680789141.8810847-CDS-C-tenellus_contig10634:2718..28981680789141.8810847-CDS-C-tenellus_contig10634:2718..2898Choristocarpus tenellus KU2346CDSC-tenellus_contig10634 2719..2898 +
1680789141.8933244-CDS-C-tenellus_contig10634:3247..38591680789141.8933244-CDS-C-tenellus_contig10634:3247..3859Choristocarpus tenellus KU2346CDSC-tenellus_contig10634 3248..3859 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig10634.1.1

>prot_C-tenellus_contig10634.1.1 ID=prot_C-tenellus_contig10634.1.1|Name=mRNA_C-tenellus_contig10634.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=371bp
MTSMAWINSTQDSLLLTGADDGIVRVWDGLLQAGTGGPGGMPPPRLVTAL
DAAPGMRMGQSSGLVADWQQETGLLFTGGAGVHLKAWDLGREQYWANWEV
PEDTAVTGGRGTGGYGGNGSSALSSNVGSVMAGFVDGSVRLYDARERRAV
QNFLEHDSWIVNLHLTKEYEMRSACLSGTVRVWDIRKESKPIKSIVVQRS
SMTALTVHNRVPIMASGSHNQFIKVRGTPQLLINTLINYMFVLSLTNVLK
EFRARRMLESCLCGSFSHSNRRVFMEILLREVSLERGGLRKCCTTVCSIA
AGRMPLIVILLGVSASRSMEGRRGGRFCVYVCVFFVFVFWGGEDLVDHAP
PSAYLVENAWCSKPETLCSA*
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mRNA from alignment at C-tenellus_contig10634:1566..4122+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig10634.1.1 ID=mRNA_C-tenellus_contig10634.1.1|Name=mRNA_C-tenellus_contig10634.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2557bp|location=Sequence derived from alignment at C-tenellus_contig10634:1566..4122+ (Choristocarpus tenellus KU2346)
TACGGTAGCTTCTGCAATCAAAATCCAGCAGGGAGTCGAATGACGTCAAT GGCATGGATCAACAGTACACAGGACTCCCTGCTGCTGACGGGGGCAGATG ATGGGATTGTGAGGGTCTGGGATGGGCTTCTGCAAGCTGGAACGGGGGGA CCTGGGGGCATGCCCCCCCCTCGGCTGGTGACAGCATTGGATGCTGCACC AGTGAGTGGGAAGTGGAGTGTTATCTTCTTGGCGGGGGATGGGAAAAGTT ACATGTTTATTGTTAACTCTGAATGAATACAGGAGGGGTAGTTGATTGAG GGGGGGTTGGTGGTAAGGAACAGATATGCTGGGAACTCATTCTGGGTCGT GCAGGGAAAGTTTTGCACATACTGGGTGTAGCCTGATTGTGGACAAAGAC TTGGAAGGGAGGCCTGTCGTCCAACCTCCCTCTCTTTTACAGACTTGCTA GCTTCAAGATTTACTTTTGTCACAAGGTTGTTGCATCTGGTCTTGTTCAT ATTTTTTTGTGTTTACATTGTAGCAGTGGTCAAGGTCTTTTGAGGGAAAA ATTATGCTTGTTGATAGGGACATCCCTTTTTCAAATTCAATAATGTTGAA TGTGTAGAATGTGAAAAGTACCACTACTCGGGAGGCAAGAGTGCATTGTA AGGGGGTATTTCTAGAGTCTGTGCAAATAAGTTGCTCCAAATGCCTGGAA GCACCTCTCAGTTCCCTCATAAAAGATATTTCAACATGTCGTAACATGAA CACAGGTGTTTGCAGCTGTTGAAGGTTAGTGCCAGGTCAAATTTTGACAT AGAATCTGATTATCGTTATCATTTCAATTGACTGTGTATATCACACGATT GATAGCAATTTCTGTACGAACCATGCACATTTATGCACTTGTTCTGAACA GTCTTTGACCCTCACCCTTCTCTGCCAGGGCATGAGGATGGGTCAATCGT CGGGACTGGTGGCGGACTGGCAGCAAGAGACAGGACTACTCTTTACAGGG GGCGCAGGCGTTCACCTCAAGGCCTGGGATCTTGGGCGGGAGCAATACTG GGCAAATTGGGAGGTGCCAGAGGACACGGCTGTGACAGTCCTCGCCTCCC CTCCTATGGAAACCTCATCTTCTCAAGCTTATGGCAGGGGAGGGAGAAGG AAGGGAGGCAGGGGGACAGGGGGATATGGAGGCAATGGATCATCAGCTCT GAGCTCAAACGTGGGTTCTGTCATGGCAGGCTTTGTGGATGGTTCTGTTC GTTTATATGATGCGAGGGAGAGGAGGGCTGTACAAAACTTCTTGGAGCAT GACAGCTGGATTGTGAATCTGCACTTGACCAAGGTTAAGGGGAGTGAAAA TCCACACACGCAGTGATTGCATGGTTGTGGGGTTTTGATTGCAGTTGTTT TGTGCAGTTGGAATTGGTGTTGGTTGTTCGCATACAGTGACTGCACTGCG ATTTAGAGTAATACTGCTTTTTCCAACCACCTCATGCAAGCTGTGTTTCA TCTGAACCTTGCGTTCATCTTCTTCCTCCTAGGTTCACCCCCTGCCTAAG ATGCCTGTGAGAATGCTGCTTAGCTCTACACCATGGTAATGATATTTTAA TGTCAAAACCTGTCGCGTTCCAAGTCTGACAAAAAATATTGACGTCTTTT TGCTGTTGATGGCTTTATTGGCACAAATTCAGGAGTATGAGATGCGGAGT GCTTGCCTGTCTGGGACAGTCCGTGTTTGGGACATCCGTAAAGAATCAAA GCCCATAAAGAGCATAGTTGTGCAGCGCTCGAGCATGACTGCTCTTACTG TGCACAATAGGGTGCCCATCATGGCCAGCGGTAGTCACAACCAGTTCATC AAGGTCAGAGGGACGCCACAGTTGCTGATTAATACCCTTATCAATTATAT GTTTGTATTGTCCTTGACCAATGTGTTGAAGGAATTTAGGGCAAGGAGGA TGCTCGAGAGTTGTCTCTGTGGCTCTTTTTCACATTCCAACAGGAGGGTG TTTATGGAAATTTTATTGAGGGAAGTGAGCTTAGAAAGGGGGGGACTCAG GAAGTGCTGTACTACTGTCTGTTCAATCGCTGCTGGAAGGATGCCTTTGA TTGTCATTCTTCTAGGTGTATCTGCATCCAGGAGTATGGAAGGCAGGAGA GGGGGCAGATTTTGTGTGTATGTGTGTGTGTTTTTTGTTTTTGTTTTTTG GGGGGGGGAAGATCTCGTTGATCATGCACCTCCTTCTGCGTATCTTGTTG AAAATGCTTGGTGCAGTAAACCTGAGACGTTGTGCAGTGCTTAGGCAAGG ATGAATCGAAATTCAGCAGGAGTAAACAAGAAGTTTGATTGTAGAGCTCT ACTTCATGTGTGGCAAGAAGCCTGGGGTTGTTTTTTGCATCTTATCCCCA TTTTGGAGTATTCTCAAGTCTTTTCTGTAGCTTGTGTACCTCATCATGCT TATCGCCTCTTTTTCTCACTACCTCACTGTTTCCACCACCCAACCCTTCC TGCTGCCCTTATATATACTTGCAGATTCTGACCCTTGATGGGGAAACACT GTCACTG
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Coding sequence (CDS) from alignment at C-tenellus_contig10634:1566..4122+

>mRNA_C-tenellus_contig10634.1.1 ID=mRNA_C-tenellus_contig10634.1.1|Name=mRNA_C-tenellus_contig10634.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=1113bp|location=Sequence derived from alignment at C-tenellus_contig10634:1566..4122+ (Choristocarpus tenellus KU2346)
ATGACGTCAATGGCATGGATCAACAGTACACAGGACTCCCTGCTGCTGAC
GGGGGCAGATGATGGGATTGTGAGGGTCTGGGATGGGCTTCTGCAAGCTG
GAACGGGGGGACCTGGGGGCATGCCCCCCCCTCGGCTGGTGACAGCATTG
GATGCTGCACCAGGCATGAGGATGGGTCAATCGTCGGGACTGGTGGCGGA
CTGGCAGCAAGAGACAGGACTACTCTTTACAGGGGGCGCAGGCGTTCACC
TCAAGGCCTGGGATCTTGGGCGGGAGCAATACTGGGCAAATTGGGAGGTG
CCAGAGGACACGGCTGTGACAGGAGGCAGGGGGACAGGGGGATATGGAGG
CAATGGATCATCAGCTCTGAGCTCAAACGTGGGTTCTGTCATGGCAGGCT
TTGTGGATGGTTCTGTTCGTTTATATGATGCGAGGGAGAGGAGGGCTGTA
CAAAACTTCTTGGAGCATGACAGCTGGATTGTGAATCTGCACTTGACCAA
GGAGTATGAGATGCGGAGTGCTTGCCTGTCTGGGACAGTCCGTGTTTGGG
ACATCCGTAAAGAATCAAAGCCCATAAAGAGCATAGTTGTGCAGCGCTCG
AGCATGACTGCTCTTACTGTGCACAATAGGGTGCCCATCATGGCCAGCGG
TAGTCACAACCAGTTCATCAAGGTCAGAGGGACGCCACAGTTGCTGATTA
ATACCCTTATCAATTATATGTTTGTATTGTCCTTGACCAATGTGTTGAAG
GAATTTAGGGCAAGGAGGATGCTCGAGAGTTGTCTCTGTGGCTCTTTTTC
ACATTCCAACAGGAGGGTGTTTATGGAAATTTTATTGAGGGAAGTGAGCT
TAGAAAGGGGGGGACTCAGGAAGTGCTGTACTACTGTCTGTTCAATCGCT
GCTGGAAGGATGCCTTTGATTGTCATTCTTCTAGGTGTATCTGCATCCAG
GAGTATGGAAGGCAGGAGAGGGGGCAGATTTTGTGTGTATGTGTGTGTGT
TTTTTGTTTTTGTTTTTTGGGGGGGGGAAGATCTCGTTGATCATGCACCT
CCTTCTGCGTATCTTGTTGAAAATGCTTGGTGCAGTAAACCTGAGACGTT
GTGCAGTGCTTAG
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