mRNA_C-tenellus_contig10623.2.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10623.2.1 vs. uniprot
Match: D8LFS1_ECTSI (DUF1279 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFS1_ECTSI) HSP 1 Score: 97.1 bits (240), Expect = 5.880e-19 Identity = 57/182 (31.32%), Postives = 92/182 (50.55%), Query Frame = 1 Query: 676 FSIAPKLVKKESRGERKEICEWREIGSRPDTVRAGLGVTQSRHEFLTSVDKKVERLTLNPNLGFPAGKEVLETTSKMRGWQSFKEKLSKEAVKRILRDYGVVAVVFHSAVFSVTLGSFFGALSQG-VDMGSILAYAPLIAENLPSPSAGNLAVAWGLTTVTGPARGVLTITLTPRVARFWRG 1218 FS P ++ G ++I +GS P + G S H V+K + + W++ + K++ E +K ++ YG VA FH +VF TLG+ + + G +D+ ++ P++A+NLP AGNLA+A+G+T+ GP R VLT+T+TPR+ARF G Sbjct: 44 FSNGPAAQRRTLSGSVRDIG----MGSSPSFMSKHPGCGSSNHSIHRGVEKDTPXXXXXXXXXXXXAAVASKAPTLADRWKAARSKVTAEYLKHFMKRYGRVAATFHMSVFLGTLGTCYSLIDYGGLDIAELVKDVPILADNLPPAGAGNLAIAYGMTSAIGPPRAVLTVTVTPRIARFLAG 221
BLAST of mRNA_C-tenellus_contig10623.2.1 vs. uniprot
Match: D7FS74_ECTSI (Ribonuclease Z n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS74_ECTSI) HSP 1 Score: 92.0 bits (227), Expect = 1.740e-15 Identity = 50/87 (57.47%), Postives = 60/87 (68.97%), Query Frame = -1 Query: 22 RLGGTDPTVWRGRGKREYHSPTLFVQCGRGYQRFCGEHHIKLAKVNKIFMTGTGAEEHAGLPGVVLSLSHLGVPMLEIFGPEGVEKL 282 R G +PT + R Y LF G G QRFCGE +KLAKVNK+F+TGTGAEEHAGL G++L+LS LG P LE+FGP GV+ L Sbjct: 34 RYSGGEPT--ENKILRRY----LF-NVGEGTQRFCGEAGVKLAKVNKLFLTGTGAEEHAGLSGLILTLSALGSPALEVFGPTGVDTL 113
BLAST of mRNA_C-tenellus_contig10623.2.1 vs. uniprot
Match: A0A5D6XWZ0_9STRA (DUF1279 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XWZ0_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 1.200e-13 Identity = 41/91 (45.05%), Postives = 55/91 (60.44%), Query Frame = 1 Query: 940 KEAVKRILRDYGVVAVVFHSAVFSVTLGSFFGALSQGVDMGSILAYAPLIAENLPSPSAGNLAVAWGLTTVTGPARGVLTITLTPRVARFW 1212 K V +L+ YG A+VFHSAVF+ T + A+ GVD+ +LA P + + P AG LA+A+ T TGPARG LTIT P +AR + Sbjct: 2 KAKVAHVLKTYGRTALVFHSAVFASTFSGAYAAIRHGVDLRDVLARVPFVDLSKLDPDAGTLALAYVSTLATGPARGALTITAAPFLARVF 92
BLAST of mRNA_C-tenellus_contig10623.2.1 vs. uniprot
Match: A0A024GJM7_9STRA (DUF1279 domain-containing protein n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024GJM7_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 2.180e-13 Identity = 37/90 (41.11%), Postives = 58/90 (64.44%), Query Frame = 1 Query: 940 KEAVKRILRDYGVVAVVFHSAVFSVTLGSFFGALSQGVDMGSILAYAPLIAENLPSPSAGNLAVAWGLTTVTGPARGVLTITLTPRVARF 1209 KE ++ +++ YG +A FH+++F+ T G+ +G + GVD+ + L P++ SAG+LA A+ T TGPARG+LTIT TP +AR Sbjct: 2 KEQLRVVMKKYGKIAAAFHASMFAATFGASYGVIRSGVDVETFLDRIPMVDARKVDASAGSLACAYIATLATGPARGLLTITATPMLARL 91
BLAST of mRNA_C-tenellus_contig10623.2.1 vs. uniprot
Match: K3W9R1_GLOUD (DUF1279 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W9R1_GLOUD) HSP 1 Score: 76.3 bits (186), Expect = 3.330e-13 Identity = 39/98 (39.80%), Postives = 57/98 (58.16%), Query Frame = 1 Query: 940 KEAVKRILRDYGVVAVVFHSAVFSVTLGSFFGALSQGVDMGSILAYAPLIAENLPSPSAGNLAVAWGLTTVTGPARGVLTITLTPRVARFWRGDAKNS 1233 K+ VK +L+ YG A++FHS VF T + A+ GVD+ ++ P + + P AG LA+A+ T TGPARG LTIT P +AR + A+ + Sbjct: 2 KDKVKHVLKTYGRTALLFHSTVFVTTFSGSYAAIRHGVDLRHVMERVPFVDLSKMDPEAGTLALAYVSTLATGPARGALTITAVPFLARMFTRHARRT 99
BLAST of mRNA_C-tenellus_contig10623.2.1 vs. uniprot
Match: A0A836CBX4_9STRA (DUF1279 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBX4_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 4.970e-13 Identity = 44/98 (44.90%), Postives = 60/98 (61.22%), Query Frame = 1 Query: 952 KRILRDYGVVAVVFHSAVFSVTLGSFFGALSQGVDMGSILAYAPLI-AENLPSPSAGN-LAVAWGLTTVTGPARGVLTITLTPRVARFWRGDAKNSQA 1239 K I+++YG VA H +VF TLG + AL +G+D+ ++LA P I L S AG LAVA+G T +TGPAR +LT+ TP+VA W K+ A Sbjct: 107 KHIMKEYGPVAATLHGSVFLTTLGGMYAALEKGLDINALLAQLPFIDGAALGSGGAGGQLAVAYGATLMTGPARTILTVVATPKVAHVWHAYIKSRPA 204
BLAST of mRNA_C-tenellus_contig10623.2.1 vs. uniprot
Match: A0A3M6VGJ4_9STRA (DUF1279 domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VGJ4_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 4.130e-12 Identity = 38/88 (43.18%), Postives = 56/88 (63.64%), Query Frame = 1 Query: 946 AVKRILRDYGVVAVVFHSAVFSVTLGSFFGALSQGVDMGSILAYAPLIAENLPSPSAGNLAVAWGLTTVTGPARGVLTITLTPRVARF 1209 +VK++L+ YG A +FHS VF TL + A++QGVD+ S+ P + + P+A LA+A+ T TGPARG LTI ++P +AR Sbjct: 4 SVKQVLKRYGRTAFLFHSTVFVSTLAGTYAAINQGVDLQSLAKRVPFVDLSKLDPNASTLALAYVSTVATGPARGALTIAVSPILARL 91
BLAST of mRNA_C-tenellus_contig10623.2.1 vs. uniprot
Match: A0A8K1CBQ9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CBQ9_PYTOL) HSP 1 Score: 71.6 bits (174), Expect = 1.780e-11 Identity = 39/102 (38.24%), Postives = 59/102 (57.84%), Query Frame = 1 Query: 949 VKRILRDYGVVAVVFHSAVFSVTLGSFFGALSQGVDMGSILAYAPLIAENLPSPSAGNLAVAWGLTTVTGPARGVLTITLTPRVARFWRGDAKNSQARGDEK 1254 VK +L+ YG A++FHS++F TL +GA+ GVD+ L P + + P+A +L +A+ T TGPARG LTI ++P +AR W + R +K Sbjct: 5 VKHVLKTYGRTALLFHSSLFVATLSGAYGAIRYGVDIEKFLDKIPFVDLSKADPNASSLMLAYVSTLATGPARGALTIGVSPVLAR-WLAKRSTTMIRASQK 105
BLAST of mRNA_C-tenellus_contig10623.2.1 vs. uniprot
Match: A0A024TND5_9STRA (DUF1279 domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TND5_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 1.120e-10 Identity = 39/91 (42.86%), Postives = 55/91 (60.44%), Query Frame = 1 Query: 943 EAVKRILRDYGVVAVVFHSAVFSVTLGSFFGALSQGVDMGSILAYAPLIAENLPSPSAGNLAVAWGLTTVTGPARGVLTITLTPRVARFWR 1215 E +K++ ++YG VAVVFHS VF TLGS + ++ GVD+ + P I +P AG+ +A+ T TGP RG +TI TP +AR R Sbjct: 18 EKLKQVTKEYGQVAVVFHSTVFLATLGSAYASIRMGVDIRHVKV--PFINLEDINPDAGSFLLAYLATLATGPLRGGITIVSTPWIARMLR 106
BLAST of mRNA_C-tenellus_contig10623.2.1 vs. uniprot
Match: W4GND2_9STRA (DUF1279 domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GND2_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 1.160e-9 Identity = 37/91 (40.66%), Postives = 56/91 (61.54%), Query Frame = 1 Query: 943 EAVKRILRDYGVVAVVFHSAVFSVTLGSFFGALSQGVDMGSILAYAPLIAENLPSPSAGNLAVAWGLTTVTGPARGVLTITLTPRVARFWR 1215 E +K++ ++YG VAVVFHS+VF TLGS + ++ GVD+ + P + P AG+ +A+ +T TGP RG +T+ TP +AR R Sbjct: 72 EKLKQVTKEYGKVAVVFHSSVFVATLGSAYTSIRMGVDIRHVKV--PFVNLEDVDPDAGSFFLAYLVTLATGPLRGGITVISTPWIARLLR 160 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10623.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10623.2.1 >prot_C-tenellus_contig10623.2.1 ID=prot_C-tenellus_contig10623.2.1|Name=mRNA_C-tenellus_contig10623.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=232bp MSSFLASRFPAALRRENRRRYSAAYRHFQPFSIAPKLVKKESRGERKEICback to top mRNA from alignment at C-tenellus_contig10623:2684..5328+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10623.2.1 ID=mRNA_C-tenellus_contig10623.2.1|Name=mRNA_C-tenellus_contig10623.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2645bp|location=Sequence derived from alignment at C-tenellus_contig10623:2684..5328+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10623:2684..5328+ >mRNA_C-tenellus_contig10623.2.1 ID=mRNA_C-tenellus_contig10623.2.1|Name=mRNA_C-tenellus_contig10623.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=696bp|location=Sequence derived from alignment at C-tenellus_contig10623:2684..5328+ (Choristocarpus tenellus KU2346)back to top |