mRNA_C-tenellus_contig10620.1.2 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10620.1.2 vs. uniprot
Match: A0A6H5K6H4_9PHAE (MFS_1_like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6H4_9PHAE) HSP 1 Score: 118 bits (295), Expect = 5.750e-28 Identity = 62/119 (52.10%), Postives = 83/119 (69.75%), Query Frame = 2 Query: 53 VKGSLLYMIFFGTVGAIMPFLPLIWVSKGLSEHEVGIVGAIRPIANFLAAPSLCAIADRHNARRQMVLLAVVLWGVSCSSVVLASNFASVAAVEIASATSSCPISSLIDASILQKFGGE 409 V +LY F G + PF+PLIW SKGLSEH+VGI+GAIRP+A+F P +CA ADRH+ +Q+V A+ L+ V+ SV+ A F +VAAVE + + S+ PI SLID+SI Q FGG+ Sbjct: 7 VMACVLYFFLFMAHGCVAPFMPLIWRSKGLSEHQVGILGAIRPVASFFVNPVMCAFADRHSIHQQVVYTALFLYVVTRPSVLFAGTFLAVAAVEASCSFSTSPIGSLIDSSIRQAFGGD 125
BLAST of mRNA_C-tenellus_contig10620.1.2 vs. uniprot
Match: A0A6H5JEM5_9PHAE (MFS_1_like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEM5_9PHAE) HSP 1 Score: 82.8 bits (203), Expect = 1.550e-15 Identity = 43/88 (48.86%), Postives = 63/88 (71.59%), Query Frame = 2 Query: 146 EHEVGIVGAIRPIANFLAAPSLCAIADRHNARRQMVLLAVVLWGVSCSSVVLASNFASVAAVEIASATSSCPISSLIDASILQKFGGE 409 E VG++GAI P+A+F P CA ADRHN ++Q+V +A +L+ V+ SV+LAS+F +VAAVEI+ + S P+ SL+DA+I GG+ Sbjct: 7 ESIVGLLGAINPVASFFWTPVACAFADRHNIQQQVVYVASILYAVTRPSVLLASSFLAVAAVEISVSVSESPVGSLVDAAIRHASGGD 94
BLAST of mRNA_C-tenellus_contig10620.1.2 vs. uniprot
Match: K8YPX5_NANGC (MFS domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YPX5_NANGC) HSP 1 Score: 70.9 bits (172), Expect = 2.840e-11 Identity = 42/135 (31.11%), Postives = 76/135 (56.30%), Query Frame = 2 Query: 11 PSEASAMSNMFLPYVKGSLLYMIFFGTVGAIMPFLPLIWVSKGLSEHEVGIVGAIRPIANFLAAPSLCAIADRHNARRQMVLLAVVLWGVSCSSVVLASNFASVAAVEIASATSSCPISSLIDASILQKFGGERQ 415 PS AS + V LL+++F+G++GA+MP+LP+ + S GL + ++G++GAI P F+ AP A+AD+ + ++L V VS + + F +A + +A + P+ L+D+S+L +R+ Sbjct: 91 PSMASTL-------VTVKLLFLLFYGSLGAVMPYLPVYYHSLGLPDKQIGMLGAITPAVTFVVAPLWGALADQTGRHKDVLLFTFVASVVSRLLFIWRTTFGWLAILVFCTAVLNAPVRPLLDSSVLNLLEDKRE 218
BLAST of mRNA_C-tenellus_contig10620.1.2 vs. uniprot
Match: D7G3W1_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3W1_ECTSI) HSP 1 Score: 70.5 bits (171), Expect = 3.840e-11 Identity = 29/45 (64.44%), Postives = 37/45 (82.22%), Query Frame = 2 Query: 113 LPLIWVSKGLSEHEVGIVGAIRPIANFLAAPSLCAIADRHNARRQ 247 +PLIW SKGLSEH+VGI+GAIRP+A+F P +CA ADRH+ +Q Sbjct: 1 MPLIWRSKGLSEHQVGILGAIRPVASFFVTPVMCAFADRHSIHQQ 45
BLAST of mRNA_C-tenellus_contig10620.1.2 vs. uniprot
Match: D7G4M5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4M5_ECTSI) HSP 1 Score: 65.9 bits (159), Expect = 1.380e-9 Identity = 28/64 (43.75%), Postives = 45/64 (70.31%), Query Frame = 2 Query: 53 VKGSLLYMIFFGTVGAIMPFLPLIWVSKGLSEHEVGIVGAIRPIANFLAAPSLCAIADRHNARR 244 + G LY F ++G++MPF+P+IW SK LSE EVG++ A+RPIA LA P +C++ ++ ++ Sbjct: 11 LPGCALYFFLFMSLGSVMPFVPVIWRSKRLSETEVGLLAAVRPIALLLAGPVICSLIGKYGVQQ 74
BLAST of mRNA_C-tenellus_contig10620.1.2 vs. uniprot
Match: D8LNX9_ECTSI (MFS_1_like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNX9_ECTSI) HSP 1 Score: 60.8 bits (146), Expect = 9.210e-8 Identity = 37/133 (27.82%), Postives = 71/133 (53.38%), Query Frame = 2 Query: 5 EIPSEASAMSNMFLP-YVKGSLLYMIFFGTVGAIMPFLPLIWVSKGLSEHEVGIVGAIRPIANFLAAPSLCAIADRHNARRQMVLLAVVLWGVSCSSVVLASNFASVAAVEIASATSSCPISSLIDASILQKF 400 E+ +A A + P Y+ ++ +F+ ++GAIMP+LP+ + S G+ + +G +GAI P FL P A+ D+ +Q+++L + S+ ++F + +V +A + P+ L+D+S LQ Sbjct: 464 EVVGKAKAKRMRWEPKYLTVKAVFFLFYSSLGAIMPYLPVYYHSLGIPDRRIGHLGAITPAMTFLFTPLWGALTDKSGMLKQILVLTFAASTLLRVSLAARTSFLWIVSVITLTAVINAPVRPLLDSSALQSL 596
BLAST of mRNA_C-tenellus_contig10620.1.2 vs. uniprot
Match: A0A7S2A7J9_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A7J9_TRICV) HSP 1 Score: 58.2 bits (139), Expect = 3.920e-7 Identity = 34/119 (28.57%), Postives = 67/119 (56.30%), Query Frame = 2 Query: 68 LYMIFFGTVGAIMPFLPLIWVSKGLSEHEVGIVGAIRPIANFLAAPSLCAIADR---HNARRQMVLLAVVLWGVSCSSVVLASNFASVAAVEIASATSSCPISSLIDASILQKFGGERQ 415 L++ ++G++G+++P+LP+ + S G +G++GA++P+ FL AP+ ++DR HN Q L +L +S S L S+ + +A + P+ SL+D+ ++ K E + Sbjct: 57 LFLSYYGSLGSLLPYLPVYYHSLGHGGGAIGLLGAVKPLTTFLVAPAWGIMSDRLGSHNFVLQFTFLVSLLLQLSVS---LKSDVRYLMVTVFLTALFNAPVKSLLDSMVMDKLSVEER 172
BLAST of mRNA_C-tenellus_contig10620.1.2 vs. uniprot
Match: B8BR57_THAPS (MFS domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BR57_THAPS) HSP 1 Score: 56.6 bits (135), Expect = 2.380e-6 Identity = 37/136 (27.21%), Postives = 72/136 (52.94%), Query Frame = 2 Query: 11 PSEASAMSNMFLPYVKGSLLYMIFFGTVGAIMPFLPLIWVSKGLSEHEVGIVGAIRPIANFLAAPSLCAIAD---RHNARRQMVLLAVVLWGVSCSSVVLASNFASVAAVEIASATSSCPISSLIDASILQKFGGE 409 P + + S L ++ +LY+ ++ ++GA+MP+LP+ + S G + +G++GA++P+ FL AP I+D H + Q ++ ++ + + SN + A A+A + P+ SLID ++ K E Sbjct: 89 PQQPARASKRILRSMR--ILYLTYYASLGALMPYLPVYFHSLGHTGSSIGLLGAVKPLTTFLVAPLWGVISDWSGDHVSTLQFTFVSSLILQLLVGT---NSNLQFLIATVFATALLNAPVKSLIDTIVMSKLTSE 219
BLAST of mRNA_C-tenellus_contig10620.1.2 vs. uniprot
Match: A0A7S2XSE9_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XSE9_9STRA) HSP 1 Score: 54.3 bits (129), Expect = 1.570e-5 Identity = 29/114 (25.44%), Postives = 63/114 (55.26%), Query Frame = 2 Query: 68 LYMIFFGTVGAIMPFLPLIWVSKGLSEHEVGIVGAIRPIANFLAAPSLCAIADRHNARRQMVLLAVVLWGVSCSSVVLASNFASVAAVEIASATSSCPISSLIDASILQKFGGE 409 L++ ++G++G +MP+LP+ + S G +G++GA++P+ F+ AP +ADR + +++ L ++ + SV + + + + SA + P+ LID+ ++ E Sbjct: 143 LFLSYYGSLGCLMPYLPVYYHSLGHGGLIIGMIGAVKPLTTFIVAPFWGFLADRSGDKFRILKLTFLVSLIGQLSVSYSHEVNFMVGMTLFSAIMNAPVKCLIDSMVMDNLNEE 256
BLAST of mRNA_C-tenellus_contig10620.1.2 vs. uniprot
Match: A0A7S3VB90_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VB90_9STRA) HSP 1 Score: 54.3 bits (129), Expect = 1.590e-5 Identity = 30/113 (26.55%), Postives = 63/113 (55.75%), Query Frame = 2 Query: 65 LLYMIFFGTVGAIMPFLPLIWVSKGLSEHEVGIVGAIRPIANFLAAPSLCAIADRHNARRQMVLLAVVLWGVSCSSVV-LASNFASVAAVEIASATSSCPISSLIDASILQKF 400 +L++ ++G++GA+MP+LP+ + S G S +G++GA++P+ F AP I+D + ++L + + ++ L N + + +A + P+ SLID+ ++ K Sbjct: 159 ILFITYYGSLGALMPYLPVYYHSLGHSGQSIGLLGAVKPLTTFFVAPLWGIISD-YTENPSLILQLTFIMSMGLQLLLPLKDNVNYLVTMVFLTALFNAPVKSLIDSMVMDKL 270 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10620.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10620.1.2 >prot_C-tenellus_contig10620.1.2 ID=prot_C-tenellus_contig10620.1.2|Name=mRNA_C-tenellus_contig10620.1.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=136bp MSNMFLPYVKGSLLYMIFFGTVGAIMPFLPLIWVSKGLSEHEVGIVGAIRback to top mRNA from alignment at C-tenellus_contig10620:115..3681- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10620.1.2 ID=mRNA_C-tenellus_contig10620.1.2|Name=mRNA_C-tenellus_contig10620.1.2|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3567bp|location=Sequence derived from alignment at C-tenellus_contig10620:115..3681- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10620:115..3681- >mRNA_C-tenellus_contig10620.1.2 ID=mRNA_C-tenellus_contig10620.1.2|Name=mRNA_C-tenellus_contig10620.1.2|organism=Choristocarpus tenellus KU2346|type=CDS|length=408bp|location=Sequence derived from alignment at C-tenellus_contig10620:115..3681- (Choristocarpus tenellus KU2346)back to top |