mRNA_C-tenellus_contig10614.1.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig10614.1.1
Unique NamemRNA_C-tenellus_contig10614.1.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
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BLAST of mRNA_C-tenellus_contig10614.1.1 vs. uniprot
Match: D8LIA4_ECTSI (Kinesin-associated protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIA4_ECTSI)

HSP 1 Score: 62.0 bits (149), Expect = 3.150e-10
Identity = 29/35 (82.86%), Postives = 33/35 (94.29%), Query Frame = 1 
Query:    1 QVQTKRQDKLLFVSLHVLINLAEDVSIERKMVRRG 105
            +VQTKRQDKLLFV LH+LINLAE+VS ERKMVR+G
Sbjct:  298 KVQTKRQDKLLFVGLHILINLAEEVSTERKMVRKG 332
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BLAST of mRNA_C-tenellus_contig10614.1.1 vs. uniprot
Match: A0A7S0N7U4_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0N7U4_9CRYP)

HSP 1 Score: 55.8 bits (133), Expect = 4.690e-8
Identity = 25/35 (71.43%), Postives = 31/35 (88.57%), Query Frame = 1 
Query:    1 QVQTKRQDKLLFVSLHVLINLAEDVSIERKMVRRG 105
            ++  K+QDKLL+V LHVL+NLAEDVS+ERKM RRG
Sbjct:  274 RITEKKQDKLLYVCLHVLLNLAEDVSVERKMKRRG 308
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BLAST of mRNA_C-tenellus_contig10614.1.1 vs. uniprot
Match: A0A836C6Y4_9STRA (Kinesin-associated protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6Y4_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 2.240e-7
Identity = 25/34 (73.53%), Postives = 29/34 (85.29%), Query Frame = 1 
Query:    1 QVQTKRQDKLLFVSLHVLINLAEDVSIERKMVRR 102
            ++Q K+QDKLLFV  HVLINLAED S ERKMV+R
Sbjct:  285 KIQAKQQDKLLFVCFHVLINLAEDASTERKMVKR 318
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BLAST of mRNA_C-tenellus_contig10614.1.1 vs. uniprot
Match: L1IJI0_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IJI0_GUITC)

HSP 1 Score: 50.8 bits (120), Expect = 2.750e-6
Identity = 20/35 (57.14%), Postives = 31/35 (88.57%), Query Frame = 1 
Query:    1 QVQTKRQDKLLFVSLHVLINLAEDVSIERKMVRRG 105
            ++  K+QDKLLFV +HVL+N+AED++IE+KM ++G
Sbjct:  287 KITKKKQDKLLFVCIHVLLNIAEDITIEKKMKKKG 321
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BLAST of mRNA_C-tenellus_contig10614.1.1 vs. uniprot
Match: A0A8J2FE09_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A120 TaxID=2202890 RepID=A0A8J2FE09_9DINO)

HSP 1 Score: 50.1 bits (118), Expect = 5.130e-6
Identity = 22/35 (62.86%), Postives = 29/35 (82.86%), Query Frame = 1 
Query:    1 QVQTKRQDKLLFVSLHVLINLAEDVSIERKMVRRG 105
            QVQ  +Q+KLL  +LH+L+NLAED+ IE+KMV RG
Sbjct:  326 QVQVLKQNKLLHTALHILLNLAEDIFIEKKMVNRG 360
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BLAST of mRNA_C-tenellus_contig10614.1.1 vs. uniprot
Match: A0A4P9WQ81_9FUNG (Kinesin-associated protein-domain-containing protein (Fragment) n=1 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4P9WQ81_9FUNG)

HSP 1 Score: 50.1 bits (118), Expect = 5.140e-6
Identity = 21/35 (60.00%), Postives = 30/35 (85.71%), Query Frame = 1 
Query:    1 QVQTKRQDKLLFVSLHVLINLAEDVSIERKMVRRG 105
            Q   ++QD+LLFVS H+L+NLAED++IE KM++RG
Sbjct:  267 QTMIRKQDQLLFVSFHLLLNLAEDLNIEVKMIKRG 301
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BLAST of mRNA_C-tenellus_contig10614.1.1 vs. uniprot
Match: A0A507E383_9FUNG (Uncharacterized protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507E383_9FUNG)

HSP 1 Score: 49.7 bits (117), Expect = 7.030e-6
Identity = 22/35 (62.86%), Postives = 29/35 (82.86%), Query Frame = 1 
Query:    1 QVQTKRQDKLLFVSLHVLINLAEDVSIERKMVRRG 105
            Q   ++QD+LLFVS H+L+NLA D+SIE KMV+RG
Sbjct:  234 QATVQKQDQLLFVSFHLLLNLAHDLSIEPKMVKRG 268
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BLAST of mRNA_C-tenellus_contig10614.1.1 vs. uniprot
Match: A0A507EJT1_9FUNG (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A507EJT1_9FUNG)

HSP 1 Score: 48.5 bits (114), Expect = 1.800e-5
Identity = 21/35 (60.00%), Postives = 29/35 (82.86%), Query Frame = 1 
Query:    1 QVQTKRQDKLLFVSLHVLINLAEDVSIERKMVRRG 105
            Q   ++QD+LLFVS H+L NLA+D++IE KMV+RG
Sbjct:  320 QAMLQKQDQLLFVSFHLLFNLAQDLTIEPKMVKRG 354
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BLAST of mRNA_C-tenellus_contig10614.1.1 vs. uniprot
Match: A0A1Y2B814_9FUNG (Kinesin-associated n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2B814_9FUNG)

HSP 1 Score: 48.1 bits (113), Expect = 2.460e-5
Identity = 22/34 (64.71%), Postives = 28/34 (82.35%), Query Frame = 1 
Query:    1 QVQTKRQDKLLFVSLHVLINLAEDVSIERKMVRR 102
            Q   ++QD+LLFV  H+L+NLAED+SIE KMVRR
Sbjct:  279 QAMIRKQDQLLFVCFHLLLNLAEDLSIEVKMVRR 312
[Close]
BLAST of mRNA_C-tenellus_contig10614.1.1 vs. uniprot
Match: A0A7S0RG46_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RG46_9CHLO)

HSP 1 Score: 48.1 bits (113), Expect = 2.490e-5
Identity = 21/32 (65.62%), Postives = 29/32 (90.62%), Query Frame = 1 
Query:   10 TKRQDKLLFVSLHVLINLAEDVSIERKMVRRG 105
            T++QDKLL+V L++L+NLAEDV+IERKM +R 
Sbjct:  283 TRKQDKLLYVCLYLLLNLAEDVNIERKMKKRN 314
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10614.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
D8LIA4_ECTSI3.150e-1082.86Kinesin-associated protein n=1 Tax=Ectocarpus sili... [more]
A0A7S0N7U4_9CRYP4.690e-871.43Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
A0A836C6Y4_9STRA2.240e-773.53Kinesin-associated protein n=1 Tax=Tribonema minus... [more]
L1IJI0_GUITC2.750e-657.14Uncharacterized protein n=2 Tax=Guillardia theta T... [more]
A0A8J2FE09_9DINO5.130e-662.86Hypothetical protein n=1 Tax=Amoebophrya sp. A120 ... [more]
A0A4P9WQ81_9FUNG5.140e-660.00Kinesin-associated protein-domain-containing prote... [more]
A0A507E383_9FUNG7.030e-662.86Uncharacterized protein n=1 Tax=Powellomyces hirtu... [more]
A0A507EJT1_9FUNG1.800e-560.00Uncharacterized protein n=2 Tax=Spizellomyces TaxI... [more]
A0A1Y2B814_9FUNG2.460e-564.71Kinesin-associated n=1 Tax=Rhizoclosmatium globosu... [more]
A0A7S0RG46_9CHLO2.490e-565.63Hypothetical protein (Fragment) n=1 Tax=Pyramimona... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig10614contigC-tenellus_contig10614:476..580 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LIA4
Preferred nameKIFAP3
PFAMsKAP
Model size105
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryno signal peptide or anchor
GOsGO:0000226,GO:0000228,GO:0000793,GO:0000794,GO:0002376,GO:0002478,GO:0002495,GO:0002504,GO:0003008,GO:0003674,GO:0003774,GO:0003777,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005737,GO:0005783,GO:0005794,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0005871,GO:0005875,GO:0005886,GO:0005929,GO:0005930,GO:0006810,GO:0006890,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0007154,GO:0007163,GO:0007165,GO:0007600,GO:0007605,GO:0007606,GO:0007608,GO:0008088,GO:0008089,GO:0008092,GO:0008104,GO:0008150,GO:0008285,GO:0009987,GO:0010638,GO:0010639,GO:0010941,GO:0010970,GO:0012505,GO:0015630,GO:0016020,GO:0016043,GO:0016192,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016939,GO:0017111,GO:0019882,GO:0019884,GO:0019886,GO:0019894,GO:0022407,GO:0022409,GO:0022607,GO:0023052,GO:0030030,GO:0030031,GO:0030155,GO:0030705,GO:0030951,GO:0030952,GO:0030993,GO:0031344,GO:0031345,GO:0031346,GO:0031503,GO:0031974,GO:0031981,GO:0032391,GO:0032501,GO:0032838,GO:0032991,GO:0033036,GO:0033043,GO:0035720,GO:0035735,GO:0035869,GO:0036064,GO:0042073,GO:0042127,GO:0042981,GO:0042995,GO:0043005,GO:0043066,GO:0043067,GO:0043069,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044447,GO:0044459,GO:0044463,GO:0044464,GO:0044782,GO:0045724,GO:0045785,GO:0046586,GO:0046587,GO:0046907,GO:0047496,GO:0048002,GO:0048193,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050877,GO:0050896,GO:0050954,GO:0051128,GO:0051129,GO:0051130,GO:0051179,GO:0051234,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051716,GO:0060271,GO:0060491,GO:0060548,GO:0065003,GO:0065007,GO:0070013,GO:0070925,GO:0071840,GO:0071944,GO:0072383,GO:0072384,GO:0072386,GO:0097014,GO:0097458,GO:0097542,GO:0097730,GO:0097731,GO:0097733,GO:0098590,GO:0098930,GO:0099111,GO:0099518,GO:0099568,GO:0120025,GO:0120031,GO:0120032,GO:0120033,GO:0120034,GO:0120035,GO:0120036,GO:0120038,GO:1902017,GO:1902018,GO:1902115,GO:1902116,GO:1902117,GO:1902855,GO:1902856,GO:1902857,GO:1905515,GO:1990075
Exons1
Evalue5.17e-11
EggNOG OGsKOG1222@1|root,KOG1222@2759|Eukaryota
Descriptionpositive regulation of calcium-dependent cell-cell adhesion
Cds size105
COG categoryM
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789140.5227041-CDS-C-tenellus_contig10614:475..5801680789140.5227041-CDS-C-tenellus_contig10614:475..580Choristocarpus tenellus KU2346CDSC-tenellus_contig10614 476..580 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig10614.1.1prot_C-tenellus_contig10614.1.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig10614 476..580 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig10614.1.1

>prot_C-tenellus_contig10614.1.1 ID=prot_C-tenellus_contig10614.1.1|Name=mRNA_C-tenellus_contig10614.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=35bp
QVQTKRQDKLLFVSLHVLINLAEDVSIERKMVRRG
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mRNA from alignment at C-tenellus_contig10614:476..580-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig10614.1.1 ID=mRNA_C-tenellus_contig10614.1.1|Name=mRNA_C-tenellus_contig10614.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=105bp|location=Sequence derived from alignment at C-tenellus_contig10614:476..580- (Choristocarpus tenellus KU2346)
CAGGTGCAGACAAAGAGGCAGGATAAGCTGCTCTTCGTCAGCTTGCACGT
TCTCATCAACCTAGCTGAGGATGTCAGCATTGAGAGGAAGATGGTGAGAA
GGGGA
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Coding sequence (CDS) from alignment at C-tenellus_contig10614:476..580-

>mRNA_C-tenellus_contig10614.1.1 ID=mRNA_C-tenellus_contig10614.1.1|Name=mRNA_C-tenellus_contig10614.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=105bp|location=Sequence derived from alignment at C-tenellus_contig10614:476..580- (Choristocarpus tenellus KU2346)
CAGGTGCAGACAAAGAGGCAGGATAAGCTGCTCTTCGTCAGCTTGCACGT
TCTCATCAACCTAGCTGAGGATGTCAGCATTGAGAGGAAGATGGTGAGAA
GGGGA
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