mRNA_C-tenellus_contig10583.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10583.1.1 vs. uniprot
Match: D7FX50_ECTSI (ApaG domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX50_ECTSI) HSP 1 Score: 205 bits (522), Expect = 6.280e-62 Identity = 96/134 (71.64%), Postives = 117/134 (87.31%), Query Frame = 1 Query: 1 RVEVQSQYHAEESKPVKDEYMFIYRIKVTNLSPQIVQLVSREWEIKSINQREKPQVVKGPGVIGQQPVLEPGQSFEYSSFCPIACAPKKGYQVIGRMQGSYMMVTGAVGEIAFEAKIDPFYLQLPKSVVDEHFG 402 RVEV+SQY+ E+S P+KD+Y+F+Y++K+TN S Q VQLVSR WEIK+I E PQ+VKGPGV+GQQPVLEPGQSFEYSS CPI CAPK+GYQV+GRM+GSY++V GAVGE AFEAKIDPFYL LP++V+DE G Sbjct: 299 RVEVRSQYYPEQSNPLKDQYIFVYKVKITNQSSQTVQLVSRTWEIKAIEATEAPQLVKGPGVVGQQPVLEPGQSFEYSSACPITCAPKEGYQVLGRMKGSYLIVMGAVGEAAFEAKIDPFYLILPQAVLDERAG 432
BLAST of mRNA_C-tenellus_contig10583.1.1 vs. uniprot
Match: A0A835ZBY5_9STRA (ApaG domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBY5_9STRA) HSP 1 Score: 155 bits (393), Expect = 6.870e-44 Identity = 77/132 (58.33%), Postives = 99/132 (75.00%), Query Frame = 1 Query: 1 RVEVQSQYHAEESKPVKDEYMFIYRIKVTNLSPQIVQLVSREWEIKSINQREKP---QVVKGPGVIGQQPVLEPGQSFEYSSFCPIACAPKKGYQVIGRMQGSYMMVTGAVGEIAFEAKIDPFYLQLPKSVV 387 RVEV++QY E+S P K +++F+YR++VTN S VQL +R W I++ N + Q VKGPGV+GQQPVLEPGQSFEYSS CP+ P+ +V+ RM+G++ MVTGAVGE FEAKIDPFYL LP+SVV Sbjct: 197 RVEVRAQYFPEQSDPAKAQFVFVYRVRVTNASRATVQLAARRWHIRTANAKTGKTAVQEVKGPGVVGQQPVLEPGQSFEYSSACPVFQRPRDSVRVLARMEGAFTMVTGAVGERGFEAKIDPFYLILPESVV 328
BLAST of mRNA_C-tenellus_contig10583.1.1 vs. uniprot
Match: H6WBA4_VAULI (ApaG domain-containing protein n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WBA4_VAULI) HSP 1 Score: 150 bits (380), Expect = 6.150e-42 Identity = 74/131 (56.49%), Postives = 97/131 (74.05%), Query Frame = 1 Query: 4 VEVQSQYHAEESKPVKDEYMFIYRIKVTNLSPQIVQLVSREWEIKSIN---QREKPQVVKGPGVIGQQPVLEPGQSFEYSSFCPIACAPKKGYQVIGRMQGSYMMVTGAVGEIAFEAKIDPFYLQLPKSVV 387 VEV SQY E+S P K Y+F+YR+ +TN SP VQLVSR+W+I++IN + + Q V GPGV+GQQP+LEPGQ FEY+S CPI PK +V+GRM+G Y+MVTG+ G+ F+AKI+PFYL LP V+ Sbjct: 198 VEVVSQYFREQSNPTKHRYIFLYRVAITNNSPFTVQLVSRKWQIRTINPNTNKTEVQEVSGPGVVGQQPILEPGQIFEYNSACPITQKPKDNIRVLGRMEGCYLMVTGSNGQHYFQAKINPFYLILPPDVM 328
BLAST of mRNA_C-tenellus_contig10583.1.1 vs. uniprot
Match: A0A835YH08_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YH08_9STRA) HSP 1 Score: 132 bits (332), Expect = 1.630e-34 Identity = 70/144 (48.61%), Postives = 95/144 (65.97%), Query Frame = 1 Query: 1 RVEVQSQYHAEESKPVKDEYMFIYRIKVTNLSPQIVQLVSREWEIKSINQ---REKPQVVKGPGVIGQQPVLEPGQSFEYSSFCPIA--------------CAPKKGYQVIGRMQGSYMMVTGAVGEIAFEAKIDPFYLQLPKS 381 RV V++QY E+S P + +++F+YR++VTN S VQL +R W I++++ R Q V+GPGV+GQQPVLEPGQSFEYSS CP+ +V+GRM+G++ MVTGAVGE FEAKI+PF+L LP S Sbjct: 216 RVAVRAQYFPEQSDPARRQFVFVYRVRVTNESRATVQLAARRWLIRTLDAKTGRTAQQEVRGPGVVGQQPVLEPGQSFEYSSACPVVRGXXXXXXXXXXXXXXXXAALRVLGRMEGAFTMVTGAVGERGFEAKIEPFHLILPAS 359
BLAST of mRNA_C-tenellus_contig10583.1.1 vs. uniprot
Match: A0A3D0I9T8_9DELT (Protein ApaG n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A3D0I9T8_9DELT) HSP 1 Score: 109 bits (273), Expect = 3.990e-28 Identity = 63/125 (50.40%), Postives = 79/125 (63.20%), Query Frame = 1 Query: 1 RVEVQSQYHAEESKPVKDEYMFIYRIKVTNLSPQIVQLVSREWEIKSINQREKPQVVKGPGVIGQQPVLEPGQSFEYSSFCPIACAPKKGYQVIGRMQGSYMMVTGAVGEIAFEAKIDPFYLQLP 375 RVEV S+Y AE S P E+ F Y +++TN + VQL+SR W I R+ Q VKGPGV+G+QP L PG+SFEY+S CP+ + IG MQG+Y MVT A GE F+AKI PF L P Sbjct: 12 RVEVTSRYVAERSAPEDGEWFFAYTVRITNQGAETVQLISRHWIITDAEGRQ--QQVKGPGVVGEQPTLRPGESFEYTSACPLGTS-------IGAMQGTYQMVTSA-GE-RFDAKIAPFTLSEP 125
BLAST of mRNA_C-tenellus_contig10583.1.1 vs. uniprot
Match: R7QG52_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QG52_CHOCR) HSP 1 Score: 114 bits (286), Expect = 4.390e-28 Identity = 57/124 (45.97%), Postives = 77/124 (62.10%), Query Frame = 1 Query: 4 VEVQSQYHAEESKPVKDEYMFIYRIKVTNLSPQIVQLVSREWEIKSINQREKPQVVKGPGVIGQQPVLEPGQSFEYSSFCPIACAPKKGYQVIGRMQGSYMMVTGAVGEIAFEAKIDPFYLQLP 375 V V+S Y E+S P + ++F Y++ +TN + QLVSR W I S E VKGPGV+G+QPVLEPG+SFEY+S CP+ + K G V+G M+G Y G G++ F I FYL+LP Sbjct: 182 VHVESYYMPEQSLPEQSRFLFGYKVTITNEGNETCQLVSRHWTINSSGGSESE--VKGPGVVGRQPVLEPGESFEYNSACPVTVSLKGGQSVVGNMKGKYHFCKGDTGDVKFSVDIATFYLKLP 303
BLAST of mRNA_C-tenellus_contig10583.1.1 vs. uniprot
Match: A0A355EUK9_9BACT (Protein ApaG n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A355EUK9_9BACT) HSP 1 Score: 108 bits (269), Expect = 1.520e-27 Identity = 58/128 (45.31%), Postives = 84/128 (65.62%), Query Frame = 1 Query: 1 RVEVQSQYHAEESKPVKDEYMFIYRIKVTNLSPQIVQLVSREWEIKSINQREKPQVVKGPGVIGQQPVLEPGQSFEYSSFCPIACAPKKGYQVIGRMQGSYMMVTGAVGEIAFEAKIDPFYLQLPKSV 384 RV+V+S Y E S+P ++ Y+F Y+++++N + QLVSREW I R+ Q V+GPGV+G+QPVL PG++FEY+SFCP+ +G M GSY MVT G+ F+A+I PF L +P +V Sbjct: 10 RVQVESFYDEERSQPAQEHYLFFYQVRISNQGNETAQLVSREWIITDAQGRQ--QRVQGPGVVGEQPVLGPGEAFEYTSFCPLPTP-------VGTMHGSYQMVT-RTGD-RFDAEIAPFSLAMPHAV 126
BLAST of mRNA_C-tenellus_contig10583.1.1 vs. uniprot
Match: A0A662DYI8_9ACTN (Protein ApaG n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A662DYI8_9ACTN) HSP 1 Score: 107 bits (266), Expect = 4.560e-27 Identity = 59/128 (46.09%), Postives = 78/128 (60.94%), Query Frame = 1 Query: 1 RVEVQSQYHAEESKPVKDEYMFIYRIKVTNLSPQIVQLVSREWEIKSINQREKPQVVKGPGVIGQQPVLEPGQSFEYSSFCPIACAPKKGYQVIGRMQGSYMMVTGAVGEIAFEAKIDPFYLQLPKSV 384 RVEV+S Y E+S P +E+ F YRIK+TN + QLVSR W I N R + VKG GV+G+QP+L PG++FEY SFCP+ + G MQG+Y M E F+A+I PF L +P S+ Sbjct: 12 RVEVESTYVPEQSDPAAEEWFFAYRIKITNEGSETAQLVSRHWTITDANGRTEE--VKGTGVVGKQPLLGPGEAFEYESFCPLRTS-------FGTMQGTYHMAPQGSDE--FDAEISPFALGMPNSI 128
BLAST of mRNA_C-tenellus_contig10583.1.1 vs. uniprot
Match: A0A2V7Z0F1_9BACT (Protein ApaG n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V7Z0F1_9BACT) HSP 1 Score: 105 bits (262), Expect = 1.740e-26 Identity = 58/128 (45.31%), Postives = 83/128 (64.84%), Query Frame = 1 Query: 1 RVEVQSQYHAEESKPVKDEYMFIYRIKVTNLSPQIVQLVSREWEIKSINQREKPQVVKGPGVIGQQPVLEPGQSFEYSSFCPIACAPKKGYQVIGRMQGSYMMVTGAVGEIAFEAKIDPFYLQLPKSV 384 RV+VQS Y E S P ++ Y F Y++ ++N+ ++ QL+SREW + N + Q V+GPGV+G+QPVL PG++FEY+SFCP+ +G M GSY+MV GE FEA+I PF L +P +V Sbjct: 10 RVQVQSFYDEERSSPPENYYFFAYKVTISNVGEEVAQLLSREWIVTDGN--GETQRVQGPGVVGEQPVLAPGEAFEYTSFCPLPTP-------VGSMHGSYLMVL-TNGE-RFEAEIAPFSLSVPHAV 126
BLAST of mRNA_C-tenellus_contig10583.1.1 vs. uniprot
Match: A0A7S4PNH5_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4PNH5_GUITH) HSP 1 Score: 109 bits (272), Expect = 9.740e-26 Identity = 62/137 (45.26%), Postives = 83/137 (60.58%), Query Frame = 1 Query: 1 RVEVQSQYHAEESKPVKDEYMFIYRIKVTNLSPQIVQLVSREWEIKS--INQREKPQVVKGPGVIGQQPVLEPGQSFEYSSFCPIACAPKKGY-------QVIGRMQGSYMMVTGAVGEIAFEAKIDPFYLQLPKSV 384 R++ Y + S P +MF Y + +TNL+ + QL+SR W IK+ K QVV G GVIG+QPVL P +SF YSS CP++ + Y +V+G M+GSY+MVTGAVG+ F+A IDPFY LP V Sbjct: 226 RIQTVGFYLPDPSSPSDGRFMFGYNVTITNLNNETCQLLSRTWLIKTRVTPSDSKTQVVSGSGVIGRQPVLGPNESFTYSSLCPLSL--DESYLRNLPQDRVLGSMEGSYLMVTGAVGQTGFQAIIDPFYFILPVDV 360 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10583.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10583.1.1 >prot_C-tenellus_contig10583.1.1 ID=prot_C-tenellus_contig10583.1.1|Name=mRNA_C-tenellus_contig10583.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=146bp RVEVQSQYHAEESKPVKDEYMFIYRIKVTNLSPQIVQLVSREWEIKSINQback to top mRNA from alignment at C-tenellus_contig10583:161..1828- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10583.1.1 ID=mRNA_C-tenellus_contig10583.1.1|Name=mRNA_C-tenellus_contig10583.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1668bp|location=Sequence derived from alignment at C-tenellus_contig10583:161..1828- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10583:161..1828- >mRNA_C-tenellus_contig10583.1.1 ID=mRNA_C-tenellus_contig10583.1.1|Name=mRNA_C-tenellus_contig10583.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=438bp|location=Sequence derived from alignment at C-tenellus_contig10583:161..1828- (Choristocarpus tenellus KU2346)back to top |