mRNA_C-tenellus_contig10565.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10565.1.1 vs. uniprot
Match: D8LCI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCI8_ECTSI) HSP 1 Score: 229 bits (583), Expect = 1.630e-69 Identity = 101/161 (62.73%), Postives = 122/161 (75.78%), Query Frame = 1 Query: 7 DRYACPNDCSGHGKCQSMREMGFTSTATPLSNTSPHGSVT-----------LYGARALPGSATWDAHSIFGCVCDSKWEVGLGVNQTQEAEYFGPDCSLLHCPSGDDPETVEDEMDCYNKTATGSKGVGLAGNLCHVDCSNRGICNYKTGECACFKGYHGQ 456 +RYACP DCSG+G C++MREMG TA PL N+S S + +YG + G+ATW++ S+FGCVCDS WEVGLG QTQ+A+YFGPDCS+LHCP+GDDP+T+ DE DC NKTA G +GVG AGNLCHVDCSNRGIC+Y TG C+CF GYHGQ Sbjct: 425 ERYACPEDCSGNGACRNMREMGMMRTAEPLVNSSTEASSSSRGDSADGFEVVYGWDSPEGTATWESRSVFGCVCDSSWEVGLGRGQTQQAQYFGPDCSMLHCPTGDDPDTLIDETDCENKTADGGRGVGSAGNLCHVDCSNRGICDYTTGVCSCFDGYHGQ 585
BLAST of mRNA_C-tenellus_contig10565.1.1 vs. uniprot
Match: A0A6H5KP52_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP52_9PHAE) HSP 1 Score: 226 bits (576), Expect = 1.590e-68 Identity = 100/160 (62.50%), Postives = 121/160 (75.62%), Query Frame = 1 Query: 10 RYACPNDCSGHGKCQSMREMGFTSTATPLSNTSPHGSVT-----------LYGARALPGSATWDAHSIFGCVCDSKWEVGLGVNQTQEAEYFGPDCSLLHCPSGDDPETVEDEMDCYNKTATGSKGVGLAGNLCHVDCSNRGICNYKTGECACFKGYHGQ 456 +YACP DCSG+G C++MREMG TA PL N+S S + +YG + G+ATW++ S+FGCVCDS WEVGLG QTQ+A+YFGPDCS+LHCP+GDDP+T+ DE DC NKTA G +GVG AGNLCHVDCSNRGIC+Y TG C+CF GYHGQ Sbjct: 409 KYACPEDCSGNGACRNMREMGMMRTAEPLVNSSTEASSSSRGDSADGFEVVYGWDSPEGTATWESRSMFGCVCDSSWEVGLGRGQTQQAQYFGPDCSMLHCPTGDDPDTLIDETDCENKTADGGRGVGSAGNLCHVDCSNRGICDYTTGVCSCFDGYHGQ 568
BLAST of mRNA_C-tenellus_contig10565.1.1 vs. uniprot
Match: A0A7S2AMA5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AMA5_9STRA) HSP 1 Score: 199 bits (506), Expect = 6.220e-61 Identity = 90/148 (60.81%), Postives = 106/148 (71.62%), Query Frame = 1 Query: 10 RYACPNDCSGHGKCQSMREMGFTSTATPLSNTSPHGSVTLYGARALPGSATWDAHSIFGCVCDSKWEVGLGVNQTQEAEYFGPDCSLLHCPSGDDPETVEDEMDCYNKTATGSKGVGLAGNLCHVDCSNRGICNYKTGECACFKGYHG 453 R +CPNDCSGHG+C SM E+ + A PL+ T YG A + +WDA S+ CVCDS+W VGLG QTQ E+FGPDCSL HC SGDDPET DE C+NKTA G +GVG AGN CHVDCSNRGIC+Y TGECACF+G++G Sbjct: 161 RRSCPNDCSGHGQCLSMAELVNAAAAHPLTAAD-----TTYGFSAPVSAQSWDAESLQACVCDSRWTVGLGPGQTQTGEWFGPDCSLQHCSSGDDPETKVDETACFNKTAPGGRGVGEAGNRCHVDCSNRGICDYSTGECACFQGWYG 303
BLAST of mRNA_C-tenellus_contig10565.1.1 vs. uniprot
Match: D7FYV5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYV5_ECTSI) HSP 1 Score: 191 bits (485), Expect = 2.520e-58 Identity = 89/151 (58.94%), Postives = 102/151 (67.55%), Query Frame = 1 Query: 7 DRYACPNDCSGHGKCQSMREMGFTSTATPLSNTSPHGSVTLYGARALPGSATWDAHSIFGCVCDSKWEVGLGVNQTQEAEYFGPDCSLLHCPSGDDPETVEDEMDCYNKTATGSK--GVGLAGNLCHVDCSNRGICNYKTGECACFKGYHG 453 +R CP+DCS HG+C +M+ + TS A PLSN VT Y + TWD IFGCVCDSKWEVGLG QTQE E+FGPDCSL HCPSGDDP T DE DC+N T++ G AGNLCHVDCSNRG C+Y TG C CF GY+G Sbjct: 116 ERSGCPDDCSDHGRCVNMKALAVTSDALPLSN------VTTYSGE--DDTVTWDEEMIFGCVCDSKWEVGLGAGQTQEPEWFGPDCSLRHCPSGDDPSTDVDETDCFNVTSSSVYLGTAGRAGNLCHVDCSNRGTCDYATGLCECFTGYYG 258
BLAST of mRNA_C-tenellus_contig10565.1.1 vs. uniprot
Match: A0A2D4CFV3_PYTIN (EGF-like domain-containing protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CFV3_PYTIN) HSP 1 Score: 186 bits (472), Expect = 3.200e-56 Identity = 86/145 (59.31%), Postives = 98/145 (67.59%), Query Frame = 1 Query: 19 CPNDCSGHGKCQSMREMGFTSTATPLSNTSPHGSVTLYGARALPGSATWDAHSIFGCVCDSKWEVGLGVNQTQEAEYFGPDCSLLHCPSGDDPETVEDEMDCYNKTATGSKGVGLAGNLCHVDCSNRGICNYKTGECACFKGYHG 453 C NDCSGHGKC SMR+M + A PLS+ T+YG L + TWD +FGCVCDS W VGLG Q Q AE+FGPDCSL+ CPSGDDP T DE DC K A+G GVG GN CHVDCSNRG C+Y TG C CF G++G Sbjct: 134 CLNDCSGHGKCVSMRDMAAMTNALPLSD------ATIYGG--LESTKTWDQDRMFGCVCDSTWAVGLGTGQRQLAEWFGPDCSLMRCPSGDDPLTAVDETDCSGKQASGGIGVGQTGNKCHVDCSNRGKCDYSTGLCQCFDGFYG 270
BLAST of mRNA_C-tenellus_contig10565.1.1 vs. uniprot
Match: A0A2P4X7I9_9STRA (EGF-like domain-containing protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X7I9_9STRA) HSP 1 Score: 184 bits (466), Expect = 1.990e-55 Identity = 85/149 (57.05%), Postives = 99/149 (66.44%), Query Frame = 1 Query: 10 RYACPNDCSGHGKCQSMREMGFTSTATPLSN-TSPHGSVTLYGARALPGSATWDAHSIFGCVCDSKWEVGLGVNQTQEAEYFGPDCSLLHCPSGDDPETVEDEMDCYNKTATGSKGVGLAGNLCHVDCSNRGICNYKTGECACFKGYHG 453 R +CPN CSGHG+C SMREM S+A PLS T G VT + TWD I GC+CDS W VGLG ++Q A+YFGPDCS +HCPSGDDP T DE DC A G G G A NLCHVDC+NRGIC+Y GEC+CF G++G Sbjct: 122 RSSCPNSCSGHGQCLSMREMAMESSAFPLSPPTKYEGDVT---------ATTWDQDRIQGCLCDSSWPVGLGAGESQLAQYFGPDCSRMHCPSGDDPMTAVDETDCEGIIAAGGGGTGAADNLCHVDCANRGICDYSRGECSCFPGFYG 261
BLAST of mRNA_C-tenellus_contig10565.1.1 vs. uniprot
Match: A0A5D6XZL0_9STRA (EGF-like domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XZL0_9STRA) HSP 1 Score: 183 bits (465), Expect = 2.370e-55 Identity = 83/148 (56.08%), Postives = 98/148 (66.22%), Query Frame = 1 Query: 10 RYACPNDCSGHGKCQSMREMGFTSTATPLSNTSPHGSVTLYGARALPGSATWDAHSIFGCVCDSKWEVGLGVNQTQEAEYFGPDCSLLHCPSGDDPETVEDEMDCYNKTATGSKGVGLAGNLCHVDCSNRGICNYKTGECACFKGYHG 453 RYACPN CSGHG+C SM+ M + A PLS + T GA A + TWD + IFGCVCDS W+VGL Q Q +++FG DCSL+ CPSGDDP T DE DC K A G G G GN CH+DCSNRG C+Y TG CACF G++G Sbjct: 116 RYACPNGCSGHGQCVSMQAMAELTNAAPLS-----AATTYAGAEA---TTTWDQNRIFGCVCDSSWDVGLAAGQRQSSQWFGADCSLMRCPSGDDPMTTVDETDCGGKLAPGGVGTGETGNKCHIDCSNRGKCDYTTGTCACFSGFYG 255
BLAST of mRNA_C-tenellus_contig10565.1.1 vs. uniprot
Match: A0A8K1CPX8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CPX8_PYTOL) HSP 1 Score: 182 bits (461), Expect = 4.700e-55 Identity = 84/148 (56.76%), Postives = 100/148 (67.57%), Query Frame = 1 Query: 10 RYACPNDCSGHGKCQSMREMGFTSTATPLSNTSPHGSVTLYGARALPGSATWDAHSIFGCVCDSKWEVGLGVNQTQEAEYFGPDCSLLHCPSGDDPETVEDEMDCYNKTATGSKGVGLAGNLCHVDCSNRGICNYKTGECACFKGYHG 453 R C N CSGHG+C SMREM ++A PLS + T GA + TWD + IFGC+CDS W VGLG Q Q++E+FGPDCSLL CP+GDDP T DE DC KTAT S VG GN CHVDC+NRGIC+Y +G C CF G++G Sbjct: 91 RSTCLNGCSGHGRCVSMREMATITSAFPLSP-----AATYEGAE---DTTTWDQNRIFGCLCDSSWAVGLGSGQRQQSEWFGPDCSLLRCPTGDDPLTAVDETDCNGKTATDSTSVGQPGNRCHVDCANRGICDYTSGTCMCFSGFYG 230
BLAST of mRNA_C-tenellus_contig10565.1.1 vs. uniprot
Match: D7FTJ2_ECTSI (EGF-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTJ2_ECTSI) HSP 1 Score: 180 bits (456), Expect = 5.830e-55 Identity = 81/147 (55.10%), Postives = 99/147 (67.35%), Query Frame = 1 Query: 16 ACPNDCSGHGKCQSMREMGFTSTATPLSNTSPHGSVTLYGARALPGSATWDAHSIFGCVCDSKWEVGLGVNQTQEAEYFGPDCSLLHCPSGDDPETVEDEMDCYNKTATGSKGVGLAGNLCHVDCSNRGICNYKTGECACFKGYHGQ 456 +CP+DCSGHG C SM E+G T+ A PL N S +YG + WD S++ CVCDS WEVGLG Q Q+AEYFG DCS CP+GDDP T ED+ DC TA G G+G AGN+CHVDCS RG C++ TGEC+CF G+ G+ Sbjct: 33 SCPSDCSGHGVCLSMFELGQTAEALPLMNGSH-----IYGDVGSDETVAWDFESMYACVCDSAWEVGLGPGQRQQAEYFGADCSQRRCPTGDDPLTAEDDTDCEGITAEGGFGLGQAGNICHVDCSGRGQCDHTTGECSCFDGFFGE 174
BLAST of mRNA_C-tenellus_contig10565.1.1 vs. uniprot
Match: G5A2N6_PHYSP (EGF-like domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=G5A2N6_PHYSP) HSP 1 Score: 181 bits (460), Expect = 1.850e-54 Identity = 81/148 (54.73%), Postives = 99/148 (66.89%), Query Frame = 1 Query: 10 RYACPNDCSGHGKCQSMREMGFTSTATPLSNTSPHGSVTLYGARALPGSATWDAHSIFGCVCDSKWEVGLGVNQTQEAEYFGPDCSLLHCPSGDDPETVEDEMDCYNKTATGSKGVGLAGNLCHVDCSNRGICNYKTGECACFKGYHG 453 R CPN CSGHG+C SMRE+ ++A PLS T YG + TWD I GC+CDS W VGLG ++Q +++FGPDCS +HCPSGDDP T EDE DC A G G G AGNLCHVDC+NRGIC+Y +G C+CF G++G Sbjct: 127 RSTCPNGCSGHGQCLSMRELATETSAFPLSP------ATTYGGDVT--ATTWDQDRIQGCLCDSYWPVGLGAGESQLSQWFGPDCSRMHCPSGDDPMTAEDETDCEGVVAAGGVGPGAAGNLCHVDCANRGICDYSSGVCSCFPGFYG 266 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10565.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10565.1.1 >prot_C-tenellus_contig10565.1.1 ID=prot_C-tenellus_contig10565.1.1|Name=mRNA_C-tenellus_contig10565.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=152bp MGDRYACPNDCSGHGKCQSMREMGFTSTATPLSNTSPHGSVTLYGARALPback to top mRNA from alignment at C-tenellus_contig10565:691..4885+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10565.1.1 ID=mRNA_C-tenellus_contig10565.1.1|Name=mRNA_C-tenellus_contig10565.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=4195bp|location=Sequence derived from alignment at C-tenellus_contig10565:691..4885+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10565:691..4885+ >mRNA_C-tenellus_contig10565.1.1 ID=mRNA_C-tenellus_contig10565.1.1|Name=mRNA_C-tenellus_contig10565.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=456bp|location=Sequence derived from alignment at C-tenellus_contig10565:691..4885+ (Choristocarpus tenellus KU2346)back to top |