mRNA_C-tenellus_contig1055.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig1055.1.1 vs. uniprot
Match: D8LJP2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJP2_ECTSI) HSP 1 Score: 332 bits (851), Expect = 1.820e-112 Identity = 174/235 (74.04%), Postives = 188/235 (80.00%), Query Frame = 1 Query: 79 GGVLAGGLHAVSGPDHLAALLPRIMGQHWHRSMRIGAVWGLGHGFSAMAIGLAAFLFKDRLGLGSNPAVVARMGTWTEGLVGVSLIAIGLLGLKESLLDYEGGEHATMHEERGVSMTATEGSAEEDRTLTTVEVIGKRGGQRAIFLNGVLHGFSWDGAPSLAPALALTTWRSVLWFLVAYCAGTMLAMSATTTVIGEGSVRVGQALDQPDIPRKLSVVSSFIAIAIGAVWLLKAI 783 GGVLAGGLHAVSGPDHLAALLPRIMGQ WH+SMRIGA WGLGHGFSA IGLAAF FKDRLGLG N +VA MG+WTEGLVGVSLIAIGLLGLKESLLDYE E + EG G +RAIF NGVLHGFSWDGAPSLAPALAL++W SVLWFL+AYC+GTM+AMSATTT+IGEGSVRVG+ALDQPDIPRKLSVVSSF+AI IGAVWL KA+ Sbjct: 8 GGVLAGGLHAVSGPDHLAALLPRIMGQKWHKSMRIGATWGLGHGFSATVIGLAAFFFKDRLGLGHNKRLVAMMGSWTEGLVGVSLIAIGLLGLKESLLDYE---ETPAFEAKSAGSAVVEGXXXXXXXXXXXXXXG----ERAIFFNGVLHGFSWDGAPSLAPALALSSWGSVLWFLLAYCSGTMVAMSATTTLIGEGSVRVGKALDQPDIPRKLSVVSSFVAITIGAVWLAKAV 235
BLAST of mRNA_C-tenellus_contig1055.1.1 vs. uniprot
Match: A0A835YVB1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVB1_9STRA) HSP 1 Score: 296 bits (759), Expect = 1.390e-98 Identity = 163/240 (67.92%), Postives = 182/240 (75.83%), Query Frame = 1 Query: 73 VGGGVLAGGLHAVSGPDHLAALLPRIMGQHWHRSMRIGAVWGLGHGFSAMAIGLAAFLFKDRL--GLGSNPAVVARMGTWTEGLVGVSLIAIGLLGLKESLLD--YEGGEHATMHEERGVSMTATEGSAEEDRTLTTVEVIGKRGGQRAIFLNGVLHGFSWDGAPSLAPALALTTWRSVLWFLVAYCAGTMLAMSATTTVIGEGSVRVGQALDQPDIPRKLSVVSSFIAIAIGAVWLLKA 780 +GGGVLAGGLHA+SGPDHLAALLPRIMG+ W +MRIGAVWGLGHGFSA IGLAAF KDR+ G G ++++GT+TE LVGVSLI IGL+GLKESLLD +E A E G A G GGQRAIFLNG+LHGFSWDGAPSLAPALA TTW VLWFL+AYC GTM AMSA TT+IGEGSVRVGQAL+QPDIP++LSVVSS IAIAIGAVWL+KA Sbjct: 1 MGGGVLAGGLHAISGPDHLAALLPRIMGKAWPVAMRIGAVWGLGHGFSATLIGLAAFFLKDRIQAGGGGGGRWISKLGTYTEVLVGVSLITIGLIGLKESLLDKPHEDDAAAAASEISGEKSPAKRG-----------------GGQRAIFLNGLLHGFSWDGAPSLAPALACTTWHGVLWFLLAYCGGTMAAMSAATTIIGEGSVRVGQALEQPDIPKRLSVVSSGIAIAIGAVWLVKA 223
BLAST of mRNA_C-tenellus_contig1055.1.1 vs. uniprot
Match: A0A4D9DEM4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DEM4_9STRA) HSP 1 Score: 234 bits (596), Expect = 9.390e-74 Identity = 123/237 (51.90%), Postives = 170/237 (71.73%), Query Frame = 1 Query: 73 VGGGVLAGGLHAVSGPDHLAALLPRIMGQHWHRSMRIGAVWGLGHGFSAMAIGLAAFLFKDRLGLGSNPAVVARMGTWTEGLVGVSLIAIGLLGLKESLLDYEGGEHATMHEERGVSMTATEGSAEEDRTLTTVEVIGKRGGQRAIFLNGVLHGFSWDGAPSLAPALALTTWRSVLWFLVAYCAGTMLAMSATTTVIGEGSVRVGQALDQPDIPRKLSVVSSFIAIAIGAVWLLKAI 783 + GG+LAG LHAV+GPDHLAALLPR +G+ W+++MRIGAVWGLGHG SA+ +G+ AF K RL S+ ++ ++ +TE L+GVSLI IGLLGLKE+ ++ + E ++ +A G+A++ T GK A+FLNG+LHGFSWDG P+LAPALA +W V+ FL +Y GTML+MS T++IGEG+V+VGQALD+P+IP+KL+ SS +AI +G VW +KA+ Sbjct: 13 ISGGMLAGSLHAVTGPDHLAALLPRCIGKRWYQAMRIGAVWGLGHGISAIIMGMVAFFLKGRLSTYSHNTLIPKLSLYTEVLIGVSLIIIGLLGLKEAA-HFDVSAVMPLEAEGSIAGSAASGAAKKKAT-------GK-----AVFLNGLLHGFSWDGTPTLAPALAFDSWLPVMTFLCSYGLGTMLSMSTATSLIGEGTVKVGQALDKPNIPKKLAQGSSVVAILVGLVWTVKAL 236
BLAST of mRNA_C-tenellus_contig1055.1.1 vs. uniprot
Match: W7TPT7_9STRA (Uncharacterized protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPT7_9STRA) HSP 1 Score: 233 bits (593), Expect = 1.200e-71 Identity = 122/237 (51.48%), Postives = 169/237 (71.31%), Query Frame = 1 Query: 73 VGGGVLAGGLHAVSGPDHLAALLPRIMGQHWHRSMRIGAVWGLGHGFSAMAIGLAAFLFKDRLGLGSNPAVVARMGTWTEGLVGVSLIAIGLLGLKESLLDYEGGEHATMHEERGVSMTATEGSAEEDRTLTTVEVIGKRGGQRAIFLNGVLHGFSWDGAPSLAPALALTTWRSVLWFLVAYCAGTMLAMSATTTVIGEGSVRVGQALDQPDIPRKLSVVSSFIAIAIGAVWLLKAI 783 + GG+LAG LHAV+GPDHLAALLPR +G+ W+++MRIGAVWGLGHG SA+ +G+ AF K RL S+ ++ ++ +TE L+GVSLI IGLLGLKE+ ++ + E ++ + G+A++ T GK A+FLNG+LHGFSWDG P+LAPALA +W V+ FL +Y GTML+MS T++IGEG+V+VGQALD+P+IP+KL+ SS +AI +G VW +KA+ Sbjct: 137 ISGGMLAGSLHAVTGPDHLAALLPRCIGKRWYQAMRIGAVWGLGHGISAIIMGMVAFFLKGRLSTYSHSTLIPKLSLYTEVLIGVSLIIIGLLGLKEAA-HFDVSAVMPLEAEGSITGSGASGAAKKKAT-------GK-----AVFLNGLLHGFSWDGTPTLAPALAFDSWLPVMTFLCSYGLGTMLSMSTATSLIGEGTVKVGQALDKPNIPKKLAQGSSVVAILVGLVWTVKAL 360
BLAST of mRNA_C-tenellus_contig1055.1.1 vs. uniprot
Match: A0A7S2Y0T2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0T2_9STRA) HSP 1 Score: 228 bits (580), Expect = 2.280e-70 Identity = 127/245 (51.84%), Postives = 169/245 (68.98%), Query Frame = 1 Query: 52 SAAKVAAVGGGVLAGGLHAVSGPDHLAALLPRIMGQHWHRSMRIGAVWGLGHGFSAMAIGLAAFLFKDRLGLGSNPAVVARMGTWTEGLVGVSLIAIGLLGLKESLLDYEGGEHATMHEERGVSMTATEGSAEEDRTLTTVEVIGKRGGQRAIFLNGVLHGFSWDGAPSLAPALALTTWRSVLWFLVAYCAGTMLAMSATTTVIGEGSVRVGQALDQPDIPRKLSVVSSFIAIAIGAVWLLKAIL 786 SAA +A+VGGGVL+G LHA+SGPDHLAA++PR +G+ W SM++GA+WGLGHG S + +GL AFL KD+L L +P +++ + TWTE LVG+SLI IG LG+KES S + + +A+E + + K G ++IF NG+LHG SWDG PSLAPALA TTWR V+ FL AYC G +++MS T++IGEGSVRVG+ D P IP++LS+ SS +AI IG +W K IL Sbjct: 86 SAASLASVGGGVLSGSLHAISGPDHLAAVVPRCIGKRWWISMQVGALWGLGHGVSGLMMGLFAFLVKDKLNLNKSP-MISNLSTWTEILVGLSLILIGFLGVKESR-----------------SFDSDKAAAKEKLEQESGK---KTGSFKSIFFNGLLHGLSWDGTPSLAPALAFTTWRPVVGFLSAYCWGVVVSMSMCTSLIGEGSVRVGR--DNPKIPQQLSMFSSGLAIVIGLLWTGKGIL 307
BLAST of mRNA_C-tenellus_contig1055.1.1 vs. uniprot
Match: A0A7S4J5D2_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J5D2_9STRA) HSP 1 Score: 216 bits (551), Expect = 5.190e-66 Identity = 123/238 (51.68%), Postives = 159/238 (66.81%), Query Frame = 1 Query: 58 AKVAAVGGGVLAGGLHAVSGPDHLAALLPRIMGQHWHRSMRIGAVWGLGHGFSAMAIGLAAFLFKDRLG-LGSNPAVVARMGTWTEGLVGVSLIAIGLLGLKESLLDYEGGEHATMHEERGVSMTATEGSAEEDRTLTTVEVIGKRGGQRAIFLNGVLHGFSWDGAPSLAPALALTTWRSVLWFLVAYCAGTMLAMSATTTVIGEGSVRVGQALDQPDIPRKLSVVSSFIAIAIGAVW 768 A A+ GGV AGGLHA++GPDHLAALLPR GQ W+R+ RIGA+WG+GHG SA +G+ AF K+R+ +G+ +V + E VG SL+ IGLLG+KE+ ++E E G S + +A ED V+V KR A+ NGVLHGFSWDGAPSLAPA+A+ TWR + FL+AY GTM AM+ TTT+IGEG+ + G+ L +PDIP+KLS VSS IAI +G W Sbjct: 80 ALAGAISGGVFAGGLHAIAGPDHLAALLPRCCGQRWYRAGRIGALWGMGHGVSATILGVCAFALKNRMSKMGAFSNIVHGASAFMEVAVGASLVFIGLLGIKEAR-EWEA-------EIEGGSPQSLSAAAGEDG----VKVAQKR----AVVFNGVLHGFSWDGAPSLAPAVAVATWRGNITFLLAYALGTMAAMTITTTLIGEGTRKAGEVLHRPDIPQKLSFVSSIIAIGVGLFW 301
BLAST of mRNA_C-tenellus_contig1055.1.1 vs. uniprot
Match: A0A1Z5K7J2_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K7J2_FISSO) HSP 1 Score: 215 bits (547), Expect = 1.500e-65 Identity = 118/240 (49.17%), Postives = 155/240 (64.58%), Query Frame = 1 Query: 70 AVGGGVLAGGLHAVSGPDHLAALLPRIMGQHWHRSMRIGAVWGLGHGFSAMAIGLAAFLFKDRL-GLGSNPAVVARMGTWTEGLVGVSLIAIGLLGLKESLLDYEGGEHATMHEERGVSMTATEGSAEEDRTLTTVEVIGKRGGQ-RAIFLNGVLHGFSWDGAPSLAPALALTTWRSVLWFLVAYCAGTMLAMSATTTVIGEGSVRVGQALDQPDIPRKLSVVSSFIAIAIGAVWLLKAI 783 A+ GG+ AGGLHA++GPDHLAALLPR GQ W+R++R+GA+WG+GHG SA +GL AF K + + V+A TE VG+SLI IG++G++E+ E +T T G+++ EV K Q RA+ NG+LHGFSWDGAPSLAPA+A+ TW L FL AY GTM M+ TT+IGEG+ + GQ LD+PDIP+KLS VSS +A+ IGAVW A+ Sbjct: 69 AITGGLFAGGLHAIAGPDHLAALLPRCCGQRWYRAVRVGALWGMGHGLSATVLGLTAFGLKSTVQNMKGMQKVLAGASHVTEIAVGLSLIVIGVMGIREA-------------REWEQDLTTTMGASQSLSAAVVDEVASKHSTQKRAVLFNGILHGFSWDGAPSLAPAVAVATWGGSLAFLSAYAIGTMTTMALATTLIGEGTRKAGQVLDRPDIPQKLSFVSSILAMVIGAVWCYLAV 295
BLAST of mRNA_C-tenellus_contig1055.1.1 vs. uniprot
Match: A0A7R9ZBQ6_9STRA (Hypothetical protein n=2 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZBQ6_9STRA) HSP 1 Score: 214 bits (545), Expect = 4.540e-65 Identity = 119/238 (50.00%), Postives = 156/238 (65.55%), Query Frame = 1 Query: 58 AKVAAVGGGVLAGGLHAVSGPDHLAALLPRIMGQHWHRSMRIGAVWGLGHGFSAMAIGLAAFLFKDRLG-LGSNPAVVARMGTWTEGLVGVSLIAIGLLGLKESLLDYEGGEHATMHEERGVSMTATEGSAEEDRTLTTVEVIGKRGGQRAIFLNGVLHGFSWDGAPSLAPALALTTWRSVLWFLVAYCAGTMLAMSATTTVIGEGSVRVGQALDQPDIPRKLSVVSSFIAIAIGAVW 768 A AV GGV AGGLHA++GPDHLAALLPR GQ W+R+ RIGA+WG+GHG SA +G+ AF K R+ +G+ VV ++ E VG SL+ IGLLG+KE+ ++E E GV + + + E+ + +RA+ NGVLHGFSWDGAPSLAPA+A+ TWR + FL+AY GTM AM+ TT+IGEG+ + G+ L +PDIP+KLS VSS IAI +G W Sbjct: 83 ALAGAVSGGVFAGGLHAIAGPDHLAALLPRCCGQRWYRAGRIGALWGMGHGVSATILGVCAFALKSRMSKMGAFSRVVRGASSFMEIAVGASLVFIGLLGIKEAR-EWEA------EIEGGVPQSLSAAAGEDGMKVAQ---------KRAVVFNGVLHGFSWDGAPSLAPAIAVATWRGNITFLLAYALGTMGAMTIATTLIGEGTRKAGEVLHRPDIPQKLSYVSSIIAIGVGLFW 304
BLAST of mRNA_C-tenellus_contig1055.1.1 vs. uniprot
Match: B8BSK2_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BSK2_THAPS) HSP 1 Score: 211 bits (536), Expect = 4.610e-63 Identity = 118/245 (48.16%), Postives = 156/245 (63.67%), Query Frame = 1 Query: 67 AAVGGGVLAGGLHAVSGPDHLAALLPRIMGQHWHRSMRIGAVWGLGHGFSAMAIGLAAFLFKDRLGL--------GSNPAVVARMGTWTEGLVGVSLIAIGLLGLKESLLDYEGGEHATMHEERGVSMTATEGSAEEDRTLTTVEVIGK---RGGQRAIFLNGVLHGFSWDGAPSLAPALALTTWRSVLWFLVAYCAGTMLAMSATTTVIGEGSVRVGQALDQPDIPRKLSVVSSFIAIAIGAVW 768 A + GG+ AG LHA++GPDHLAAL+PR G W+R+ RIGAVWGLGHG SA +G+A +L K + L G V+ G++ E +GVSLI IGLLG+KE+ GE A E + T E ++ ++L+ + + AI NG+LHGFSWDGAPSLAPA+A++TWR L FL++Y GTM AM+ TTVIGEG+ R LD+PD+PR LSV SSF+A+ +G VW Sbjct: 116 ATITGGLFAGSLHAIAGPDHLAALIPRCCGLPWYRAARIGAVWGLGHGVSATLLGMAGYLVKRGVNLFGHGGVMGGGKFDVLHHAGSFMELAIGVSLIVIGLLGIKEAREWESPGESAC---EVTDAATGEEEGGQQPQSLSAAVTPNSSPIKTAKSAILFNGILHGFSWDGAPSLAPAVAISTWRGSLTFLISYALGTMAAMTLATTVIGEGTRRASDKLDRPDLPRDLSVGSSFLALIVGVVW 357
BLAST of mRNA_C-tenellus_contig1055.1.1 vs. uniprot
Match: A0A0G4EAE2_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EAE2_VITBC) HSP 1 Score: 213 bits (542), Expect = 5.060e-63 Identity = 124/251 (49.40%), Postives = 162/251 (64.54%), Query Frame = 1 Query: 49 ISAAKVAAVGGGVLAGGLHAVSGPDHLAALLPRIMGQHWHRSMRIGAVWGLGHGFSAMAIGLAAFLFKDRL------GLGSNPAVVARMGTWTEGLVGVSLIAIGLLGLKESLLDYEGGEHATMHEERGVSMTATEGSAEEDRTLTTVEVIGKRGGQRAIFLNGVLHGFSWDGAPSLAPALALTTWRSVLWFLVAYCAGTMLAMSATTTVIGEGSVRVGQALDQPDIPRKLSVVSSFIAIAIGAVWLLKAI 783 + AA + VGGG LAG LHAVSGPDHLAALLP+ +G+ W + ++G VWGLGHG SAM +G+ AF+ KDR+ GL A++ RM TWTEGLVG+SLI IG G KE+ ++ E + R A E E R L+ +RG +F NG+LHGFS DGAP LAP+L+ T W +V FL++YC GTML MSA + GEGS+R+ +A+D+PDIP++L+ +S A IG VW KAI Sbjct: 205 LPAASIVTVGGGALAGSLHAVSGPDHLAALLPQCLGRRWTGAGKLGLVWGLGHGLSAMIMGMLAFVLKDRIFVMDAAGLHGG-ALIERMETWTEGLVGLSLILIGFFGYKEAR-SWDAEELQAQLDAR-----AKEEQKEGYRDLSASL---RRG--LTLFFNGMLHGFSLDGAPGLAPSLSFTRWPAVFLFLLSYCTGTMLTMSACSAAAGEGSIRLTRAVDRPDIPKRLAFGASAFAAGIGIVWFAKAI 443 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig1055.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig1055.1.1 >prot_C-tenellus_contig1055.1.1 ID=prot_C-tenellus_contig1055.1.1|Name=mRNA_C-tenellus_contig1055.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=264bp MGLGPGCPPAILATTFISAAKVAAVGGGVLAGGLHAVSGPDHLAALLPRIback to top mRNA from alignment at C-tenellus_contig1055:109..2015- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig1055.1.1 ID=mRNA_C-tenellus_contig1055.1.1|Name=mRNA_C-tenellus_contig1055.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1907bp|location=Sequence derived from alignment at C-tenellus_contig1055:109..2015- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig1055:109..2015- >mRNA_C-tenellus_contig1055.1.1 ID=mRNA_C-tenellus_contig1055.1.1|Name=mRNA_C-tenellus_contig1055.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=792bp|location=Sequence derived from alignment at C-tenellus_contig1055:109..2015- (Choristocarpus tenellus KU2346)back to top |