mRNA_C-tenellus_contig10546.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10546.1.1 vs. uniprot
Match: A0A6H5JD86_9PHAE (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JD86_9PHAE) HSP 1 Score: 325 bits (833), Expect = 1.930e-101 Identity = 144/223 (64.57%), Postives = 181/223 (81.17%), Query Frame = 1 Query: 1 MEEKDGSTPPLHCVVCVEEIDCEKHLHAVGPCNHLGVCSLCYLRLRKLLKEMSCVLCKTEMDRVMVCDSESLRPFEDFHVWGDSAGPGYEWEEQSRMFLPKSYSQGYVRMLQEHRCHTEGCHHPKYDHMQGLEKHLREQHKLYFCKVCLRERKVFLMEQTTYTRSQLDQHIRQGNPELGFKGHPRCEFCKTRYYNNTQLHQHLVKDHFSCHLCEKMGILHKVH 669 M E+ S HCVVCVEEID E+ LHA GPCNHLGVCSLCYLRLR+L+KE +CVLCKT MDRV+VC++E++RPFE+F +WGD+AGP Y+W+++SR+FLPK+Y++ +VR LQEHRC E C PK +++ LEKHLRE+HK CK+CL+ RKVF+MEQ YT +L QHI G+P+LG GHPRCEFCKTR+Y+ QLH HLVKDH+SCH+CEK GILHK + Sbjct: 1 MAEEVLSVEHTHCVVCVEEIDGEERLHAFGPCNHLGVCSLCYLRLRQLMKEDTCVLCKTVMDRVIVCETENIRPFEEFQIWGDNAGPEYDWDDKSRIFLPKAYNKNFVRPLQEHRCGAENCPQPKCNNVFALEKHLREKHKSNLCKICLKNRKVFIMEQVRYTNLELQQHIVSGDPQLGQTGHPRCEFCKTRFYDAAQLHDHLVKDHYSCHICEKQGILHKYY 223
BLAST of mRNA_C-tenellus_contig10546.1.1 vs. uniprot
Match: A0A835Z051_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z051_9STRA) HSP 1 Score: 252 bits (643), Expect = 9.330e-75 Identity = 112/211 (53.08%), Postives = 146/211 (69.19%), Query Frame = 1 Query: 37 CVVCVEEIDCEKHLHAVGPCNHLGVCSLCYLRLRKLLKEMSCVLCKTEMDRVMVCDSESLRPFEDFHVWGDSAGPGYEWEEQSRMFLPKSYSQGYVRMLQEHRCHTEGCHHPKYDHMQGLEKHLREQHKLYFCKVCLRERKVFLMEQTTYTRSQLDQHIRQGNPELGFKGHPRCEFCKTRYYNNTQLHQHLVKDHFSCHLCEKMGILHKVH 669 CV+C E D EK L AVG CNH GVCSLCYLRLRKL+KE +CVLCKT M+++M+CD + L+PF DF +WG+ AGP Y W+E +R FLP+ Y +V L E C C LE HLRE+H L C+VCL+ +KVFL E ++ +L+ HIRQG+P GF GHPRCEFC++R+Y+ + L +HL K+H++CHLCE G LHK + Sbjct: 50 CVICCEMFDEEKRLAAVGACNHPGVCSLCYLRLRKLMKEYNCVLCKTPMEQLMICDVDGLQPFSDFAIWGNDAGPNYVWDETARAFLPRPYLDSFVSHLDEPACGVATCKSGLLPSQGALESHLRERHGLSLCRVCLKHKKVFLAEHRRFSAQELEHHIRQGDPTHGFFGHPRCEFCRSRFYDKSHLFEHLTKEHYTCHLCEAAGRLHKYY 260
BLAST of mRNA_C-tenellus_contig10546.1.1 vs. uniprot
Match: W4HDC7_9STRA (C2H2-type domain-containing protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HDC7_9STRA) HSP 1 Score: 194 bits (494), Expect = 4.470e-54 Identity = 96/210 (45.71%), Postives = 130/210 (61.90%), Query Frame = 1 Query: 16 GSTPPLHCVVCVEEIDCEKHLHAVGPCNHLGVCSLCYLRLRKLLKEMSCVLCKTEMDRVMVCDSESLRPFEDFHVWGDSAGPGYEWEEQSRM-FLPKSYSQGYVRMLQEHRCHTEGCHHP-KYDHMQGLEKHLREQHKLYFCKVCLRERKVFLMEQTTYTRSQLDQHIRQGNPELGFKGHPRCEFCKTRYYNNTQLHQHLVKDHFSCHLC 639 S+ CVVC ID + VG CNHLG CS+C LR+R+LLK CV+CKTEMDRV +C ++ FE F WGD+ GP + ++E S M FL ++YS V+ L+ C C + +++ L++HL +H L +C +CL + VFL EQ YT S L +H QGNPE GF GHP+C FC + YY N +LH+HL K+HF C +C Sbjct: 7 ASSASQACVVCCLNIDNKTRFQTVGSCNHLGCCSICALRMRQLLKSKHCVMCKTEMDRV-ICITDDAMTFESFQDWGDNIGPSHTFDEASGMYFLKENYSA--VQGLRSLTCSARACPDKHSFPNIKALKQHLNTKHALSYCDICLDHKHVFLEEQELYTASALKKHKTQGNPEHGFNGHPKCNFCASSYYGNNELHEHLRKNHFECEIC 213
BLAST of mRNA_C-tenellus_contig10546.1.1 vs. uniprot
Match: A0A6G0XFY2_9STRA (RING-type domain-containing protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XFY2_9STRA) HSP 1 Score: 194 bits (493), Expect = 5.620e-54 Identity = 88/202 (43.56%), Postives = 129/202 (63.86%), Query Frame = 1 Query: 37 CVVCVEEIDCEKHLHAVGPCNHLGVCSLCYLRLRKLLKEMSCVLCKTEMDRVMVCDSESLRPFEDFHVWGDSAGPGYEWEEQSRMFLPKSYSQGYVRMLQEHRCHTEGC-HHPKYDHMQGLEKHLREQHKLYFCKVCLRERKVFLMEQTTYTRSQLDQHIRQGNPELGFKGHPRCEFCKTRYYNNTQLHQHLVKDHFSCHLC 639 C+VC ID + VGPCNH+G CS+C LR+R+LLK C++CKTEM+RV +C ++ + FE F WGD+ GP + ++E S M+ K + V+ ++ C C + +++ L++HL ++H L FC +CL + VFL EQ YT L +H QGNPE GF GHP+C+FC+ R+Y N +LH+HL K+HF C +C Sbjct: 14 CLVCCLSIDNKTRFQTVGPCNHVGCCSVCALRMRQLLKSKHCIMCKTEMERV-ICITDESQTFESFQDWGDNIGPTHAYDEASGMYFVKENYKA-VQAMRNLTCGARNCPDKSSFPNIKALKQHLNQKHGLAFCDICLEHKHVFLQEQELYTAGGLKKHKTQGNPEEGFNGHPKCDFCQNRFYGNNELHEHLRKNHFECEIC 213
BLAST of mRNA_C-tenellus_contig10546.1.1 vs. uniprot
Match: A0A024UQB2_9STRA (RING-type domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UQB2_9STRA) HSP 1 Score: 189 bits (479), Expect = 5.070e-52 Identity = 92/203 (45.32%), Postives = 125/203 (61.58%), Query Frame = 1 Query: 37 CVVCVEEIDCEKHLHAVGPCNHLGVCSLCYLRLRKLLKEMSCVLCKTEMDRVMVCDSESLRPFEDFHVWGDSAGPGYEWEEQSRM-FLPKSYSQGYVRMLQEHRCHTEGCHHP-KYDHMQGLEKHLREQHKLYFCKVCLRERKVFLMEQTTYTRSQLDQHIRQGNPELGFKGHPRCEFCKTRYYNNTQLHQHLVKDHFSCHLC 639 CVVC ID + VG CNH+G CS+C LR+R+LLK CV+CKTEMDRV +C ++ FE F WGD+ GP + ++E S M FL ++YS V+ L+ C C + +++ L++HL +H L FC CL + FL EQ YT L +H QGNPE GF GHP+C+FC + YY N +LH+HL K H+ C +C Sbjct: 14 CVVCCLSIDNKTRFQTVGSCNHVGCCSICALRMRQLLKSKQCVMCKTEMDRV-ICITDDTMTFESFQDWGDNIGPTHIFDEGSGMYFLKENYSA--VQGLRSLTCSARNCPDKHSFPNIKALKQHLNTKHALSFCDFCLDHKNAFLQEQVLYTAGALKKHKSQGNPEEGFNGHPKCDFCSSSYYGNNELHEHLRKHHYECEIC 213
BLAST of mRNA_C-tenellus_contig10546.1.1 vs. uniprot
Match: A0A485L9N1_9STRA (Aste57867_18171 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L9N1_9STRA) HSP 1 Score: 185 bits (470), Expect = 9.570e-51 Identity = 84/202 (41.58%), Postives = 127/202 (62.87%), Query Frame = 1 Query: 37 CVVCVEEIDCEKHLHAVGPCNHLGVCSLCYLRLRKLLKEMSCVLCKTEMDRVMVCDSESLRPFEDFHVWGDSAGPGYEWEEQSRMFLPKSYSQGYVRMLQEHRCHTEGC-HHPKYDHMQGLEKHLREQHKLYFCKVCLRERKVFLMEQTTYTRSQLDQHIRQGNPELGFKGHPRCEFCKTRYYNNTQLHQHLVKDHFSCHLC 639 CVVC ID + +GPCNH+G CS+C LR+R+LLK C++CK EM+RV +C +E + FE F WGD+ GP + ++E S +F K + V+ ++ C C + +++ L++H ++H L +C +CL + VFL EQ YT + L +H GNP+ GF GHP+C+FC+ R+Y NT+L+ HL K+HF C +C Sbjct: 14 CVVCCLSIDNKTRFQTIGPCNHVGCCSVCALRMRQLLKSKQCIMCKAEMERV-ICITEETQTFEGFQDWGDNIGPNHVFDEASGIFFVKENIKT-VQAMRNLTCGARNCPDKSSFPNIKALKQHTNQKHGLTYCDICLDHKHVFLQEQELYTAAGLKKHKTAGNPDEGFNGHPKCDFCQNRFYGNTELYDHLRKNHFECEIC 213
BLAST of mRNA_C-tenellus_contig10546.1.1 vs. uniprot
Match: A0A1V9ZM81_9STRA (RING-type domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZM81_9STRA) HSP 1 Score: 182 bits (463), Expect = 9.710e-50 Identity = 82/203 (40.39%), Postives = 124/203 (61.08%), Query Frame = 1 Query: 37 CVVCVEEIDCEKHLHAVGPCNHLGVCSLCYLRLRKLLKEMSCVLCKTEMDRVMVCDSESLRPFEDFHVWGDSAGPGYEWEEQSRMFLPKSYSQGYVRMLQEHRCHTEGCHHPK--YDHMQGLEKHLREQHKLYFCKVCLRERKVFLMEQTTYTRSQLDQHIRQGNPELGFKGHPRCEFCKTRYYNNTQLHQHLVKDHFSCHLC 639 C+VC ID VGPCNH G CSLC LR+R++LK C LCKT+M+RV +C + R FE F WGD+ GP + ++E S M+ K + ++ ++ C C+ K + + L+ HL +H FC +C+ +F+ EQT +++ L +H +GNPE GF GHP+C+FC +R+Y+N +L++HL K+HF C +C Sbjct: 13 CLVCCHSIDNVTRFQTVGPCNHHGCCSLCVLRMRQILKNTHCSLCKTDMNRV-ICVEDDTRTFESFQDWGDNIGPSHVYDEASAMYFLKDNYKA-IQAMRSFACPVSKCNDKKATFANYGALKNHLNSKHGQSFCDICVDHNNLFIQEQTLFSKEALKKHTNKGNPEQGFMGHPKCDFCASRFYSNNELYEHLRKNHFECEIC 213
BLAST of mRNA_C-tenellus_contig10546.1.1 vs. uniprot
Match: A0A4D9CU11_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CU11_9STRA) HSP 1 Score: 183 bits (465), Expect = 1.300e-49 Identity = 85/222 (38.29%), Postives = 136/222 (61.26%), Query Frame = 1 Query: 1 MEEKDGSTPPLHCVVCVEEIDCEKHLHAVGPCNHLGVCSLCYLRLRKLLKEMSCVLCKTEMDRVMVC--DSESLRPFEDFHVWGDSAGPGYEWEEQSRMFLPKSYSQGYVRMLQEHRC---HTEGCHHPKYDHMQGLEKHLREQHKLYFCKVCLRERKVFLMEQTTYTRSQLDQHIRQGNPELGFKGHPRCEFCKTR-YYNNTQLHQHLVKDHFSCHLCEKM 648 + E+ G CV+C E D KH AVG C+H G+C+LC++RLR L+++ +C LCK ++ V V D+ +++PF ++WG AGPGY ++E++ MF+P+++ + +Q RC + C + D ++ L HL++ H Y C+VCL +KVF+ EQT Y + L H+ G + GF GHPRC+FC+ + +Y+ T L HL H+SC +CE++ Sbjct: 143 VRERGGEGLVASCVICAEMFDSGKHRPAVGACDHGGICALCFMRLRLLIEDRACPLCKASLEHVYVFNGDTTTIQPFASLNIWGTEAGPGYIYDERASMFMPRAFHRDVFAPMQGFRCSPAESNACRYEGKD-LRELRTHLQQAHAQYLCEVCLSHKKVFVGEQTRYVKKALAGHMEHGEADAGFSGHPRCKFCRNKPFYDLTALFHHLRSAHYSCDVCERL 363
BLAST of mRNA_C-tenellus_contig10546.1.1 vs. uniprot
Match: W2R785_PHYPN (C2H2-type domain-containing protein n=14 Tax=Phytophthora TaxID=4783 RepID=W2R785_PHYPN) HSP 1 Score: 181 bits (460), Expect = 1.850e-49 Identity = 87/201 (43.28%), Postives = 124/201 (61.69%), Query Frame = 1 Query: 37 CVVCVEEIDCEKHLHAVGPCNHLGVCSLCYLRLRKLLKEMSCVLCKTEMDRVMVCDSESLRPFEDFHVWGDSAGPGYEWEEQSRMFLPKSYSQGYVRMLQEHRCHTEGCHHPKYDHMQGLEKHLREQHKLYFCKVCLRERKVFLMEQTTYTRSQLDQHIRQGNPELGFKGHPRCEFCKTRYYNNTQLHQHLVKDHFSCHLC 639 CV+C ID + VG CNH G CS+C LRLR+LL + SCV+CKT+M RV +C S + FE F WGD+ GP + ++E S MF K +R L++ C G K+ + L H+ + H + +C +CL +KVFL E +T+ QL +H +GNP GF GHPRC+FC +R+Y+ T+L++HL K+HF C +C Sbjct: 8 CVLCCNAIDNASRFNTVGVCNHPGCCSICALRLRQLLGQTSCVMCKTDMPRV-ICISNEEQTFESFQDWGDNIGPSHVFDEASGMFFLKEDYTKRIRKLRDPLCKKCG---KKFATVNALRTHVLDVHGVQYCSICLENKKVFLEELELFTKDQLKKHNTKGNPHEGFMGHPRCDFCFSRFYSTTELYEHLRKNHFECDIC 204
BLAST of mRNA_C-tenellus_contig10546.1.1 vs. uniprot
Match: D0NB79_PHYIT (C2H2-type domain-containing protein n=3 Tax=Phytophthora infestans TaxID=4787 RepID=D0NB79_PHYIT) HSP 1 Score: 181 bits (460), Expect = 1.930e-49 Identity = 87/201 (43.28%), Postives = 123/201 (61.19%), Query Frame = 1 Query: 37 CVVCVEEIDCEKHLHAVGPCNHLGVCSLCYLRLRKLLKEMSCVLCKTEMDRVMVCDSESLRPFEDFHVWGDSAGPGYEWEEQSRMFLPKSYSQGYVRMLQEHRCHTEGCHHPKYDHMQGLEKHLREQHKLYFCKVCLRERKVFLMEQTTYTRSQLDQHIRQGNPELGFKGHPRCEFCKTRYYNNTQLHQHLVKDHFSCHLC 639 CV+C ID + VG CNH G CS+C LRLR+LL + SCV+CKT+M RV +C S + FE F WGD+ GP + +++ S MF K +R L++ C G K+ + L H+ + H L +C +CL +KVFL E +T+ QL +H +GNP GF GHPRC+FC +R+Y+ T+L+ HL K+HF C +C Sbjct: 8 CVLCCNAIDNASRFNTVGVCNHSGCCSICALRLRQLLGQTSCVMCKTDMPRV-ICISNEDQSFESFQDWGDNIGPSHVFDDTSGMFFLKEDYTKRIRKLRDPLCKKCG---KKFATVSALRTHVLDAHGLQYCSICLENKKVFLEELELFTKDQLKKHNNKGNPHEGFMGHPRCDFCFSRFYSTTELYDHLRKNHFECDIC 204 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10546.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10546.1.1 >prot_C-tenellus_contig10546.1.1 ID=prot_C-tenellus_contig10546.1.1|Name=mRNA_C-tenellus_contig10546.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=225bp MEEKDGSTPPLHCVVCVEEIDCEKHLHAVGPCNHLGVCSLCYLRLRKLLKback to top mRNA from alignment at C-tenellus_contig10546:170..4222- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10546.1.1 ID=mRNA_C-tenellus_contig10546.1.1|Name=mRNA_C-tenellus_contig10546.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=4053bp|location=Sequence derived from alignment at C-tenellus_contig10546:170..4222- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10546:170..4222- >mRNA_C-tenellus_contig10546.1.1 ID=mRNA_C-tenellus_contig10546.1.1|Name=mRNA_C-tenellus_contig10546.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=675bp|location=Sequence derived from alignment at C-tenellus_contig10546:170..4222- (Choristocarpus tenellus KU2346)back to top |