mRNA_C-tenellus_contig10532.1.2 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10532.1.2 vs. uniprot
Match: D8LFV0_ECTSI (White-brown-complex ABC transporter family (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFV0_ECTSI) HSP 1 Score: 185 bits (469), Expect = 1.250e-45 Identity = 107/184 (58.15%), Postives = 122/184 (66.30%), Query Frame = 1 Query: 697 LYTFCHYFSQAICANGMEFGGKHIRVDCAAGGGVYDHIRTVFVGNLPMDSSDEEVRALFVSKLEAGDSAVEGVRLVRDKSTLVGKGIGYILLADRALAAKALQLHGTKLRKRLLRVMPCGKRTKGRGGRVE-GREDARPEERTGPAEVLSKKRRKSGSFSAEKFASFEGRRSVPDGFLRRLKNK 1245 +Y C +A+ ANG + GGKH+RVD A G YDH R+VF+GNLPMD+ +EEVR LF SKLE G +VEGVRLVRDK+TLVGKG GY+LLADRALAA AL L GTKL+ R LRVMPCGKRTKGRGG + G ED KFASFEGRR+ G LRRLK K Sbjct: 403 VYKDCASVEKALAANGTDVGGKHVRVDRAKSG-EYDHTRSVFLGNLPMDAGEEEVRELFASKLEGGPKSVEGVRLVRDKATLVGKGFGYVLLADRALAAAALALQGTKLKGRPLRVMPCGKRTKGRGGVAKPGLED-------------------------HKFASFEGRRTTDVGVLRRLKRK 560
BLAST of mRNA_C-tenellus_contig10532.1.2 vs. uniprot
Match: A0A6H5KDC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDC0_9PHAE) HSP 1 Score: 177 bits (450), Expect = 1.940e-44 Identity = 91/132 (68.94%), Postives = 108/132 (81.82%), Query Frame = 1 Query: 724 QAICANGMEFGGKHIRVDCAAGGGVYDHIRTVFVGNLPMDSSDEEVRALFVSKLEAGDSAVEGVRLVRDKSTLVGKGIGYILLADRALAAKALQLHGTKLRKRLLRVMPCGKRTKGRGGRVEGREDARPEER 1119 +A+ ANG + GGKH+RVD A G YDH R+VF+GNLPMD+++EEVR LF SKLE G +VEGVRLVRDK+TLVGKG GY+LLADRALAA AL LHGTKL+ R LRVMPCGKRTKGRGG + ++ARP+ R Sbjct: 398 KALAANGTDVGGKHVRVDRAKSG-EYDHTRSVFLGNLPMDAAEEEVRELFASKLEGGPKSVEGVRLVRDKATLVGKGFGYVLLADRALAAAALALHGTKLKGRPLRVMPCGKRTKGRGGVAKPGQEARPQVR 528
BLAST of mRNA_C-tenellus_contig10532.1.2 vs. uniprot
Match: A0A835YND0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YND0_9STRA) HSP 1 Score: 120 bits (300), Expect = 2.270e-25 Identity = 68/120 (56.67%), Postives = 81/120 (67.50%), Query Frame = 1 Query: 727 AICANGMEFGGKHIRVDCAAGGGVYDHIRTVFVGNLPMDSSDEEVRALFVSKLEAGDSAVEGVRLVRDKSTLVGKGIGYILLADRALAAKALQLHGTKLRKRLLRVMPCGKRTKG-RGGR 1083 A+ ANG E G H+RVD AA V D R+VF+GNLP D +EEVRA F E G +A+EGVRL+RD T +GKG GY+L D A AL+L G+ LRKR LRV CG+RTKG RGGR Sbjct: 265 ALAANGRELNGHHLRVDSAARPTV-DPARSVFLGNLPFDVREEEVRAHFSEISEDGTAAIEGVRLIRDPDTQLGKGFGYVLFRDAATVGAALRLDGSALRKRELRVHVCGRRTKGGRGGR 383
BLAST of mRNA_C-tenellus_contig10532.1.2 vs. uniprot
Match: A0A7S2WDD9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WDD9_9STRA) HSP 1 Score: 103 bits (257), Expect = 6.370e-21 Identity = 58/121 (47.93%), Postives = 78/121 (64.46%), Query Frame = 1 Query: 727 AICANGMEFGGKHIRVDCAAGGGVYDHIRTVFVGNLPMDSSDEEVRALFVSKLEAGDS---AVEGVRLVRDKSTLVGKGIGYILLADRALAAKALQLHGTKLRKRLLRVMPCGKRTKGRGG 1080 A+ ++G+ F +H+R+D A +D R+VF+GNLP D+ +E+VR F S LE VEGVR+VRD T GKG GY+LL++R A+ALQLH + R +RVM CGKR KGR G Sbjct: 54 AVQSDGLVFRERHLRIDSATRKD-FDAQRSVFLGNLPFDADEEDVRKHFASVLETSAEDGPVVEGVRIVRDALTQRGKGFGYVLLSNRTAVAQALQLHESTFAGRKIRVMTCGKRFKGRRG 173
BLAST of mRNA_C-tenellus_contig10532.1.2 vs. uniprot
Match: A0A7R9UAS7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UAS7_9STRA) HSP 1 Score: 105 bits (262), Expect = 8.340e-21 Identity = 75/179 (41.90%), Postives = 103/179 (57.54%), Query Frame = 1 Query: 724 QAICANGMEFGGKHIRVDCAAGG-GVYDHIRTVFVGNLPMDSSDEEVRALFVSKLEA--GDSAVEGVRLVRDKSTLVGKGIGYILLADRALAAKALQLHGTKLRKRLLRVMPCGKRTKGRGGRVEGREDARPEERTGPAEVLSKKRRKSGSFSAEKFASFEGRR-SVPDGFLRRLKNKK 1248 +A+ A+G E G +HIRVD G +++ RT+F+G+LP +E+VR F+ L A G V+GVRL+RDKSTL+GKG GY+LL+ +A A AL+L R+ RV CG+R K + R D +PE K++K +AE SFEG R S DG RRL +KK Sbjct: 169 KALEADGAELGDRHIRVDRLQGSQALFNASRTLFLGSLPYTVDEEDVRHKFIELLSASHGGDVVQGVRLIRDKSTLLGKGFGYLLLSSKAAVADALRLPEVSFGGRVARVQTCGRRFKTQNARG----DVKPE-----------KKQKKAKRNAE---SFEGARASELDGARRRLASKK 329
BLAST of mRNA_C-tenellus_contig10532.1.2 vs. uniprot
Match: A0A397AYA5_9STRA (RRM domain-containing protein n=8 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397AYA5_9STRA) HSP 1 Score: 106 bits (264), Expect = 3.300e-20 Identity = 75/184 (40.76%), Postives = 97/184 (52.72%), Query Frame = 1 Query: 739 NGMEFGGKHIRVDCAAGGGVYDHIRTVFVGNLPMDSSDEEVRALF--VSKLEAGDSAVEGVRLVRDKSTLVGKGIGYILLADRALAAKALQLHGTKLRKRLLRVMPCGKRTKGRGGRVEGREDARPEERTGPAEVLSKKRRKSGSFSAEKFASFEGRRSVPDGFLRRLKNKKGFEAASSVPAKR 1284 N EF K +RVD A D R+VFVGNL +++D++VR+ F V + +A +AVE VR++RDK T +GKG GY+L D + AAKAL LHG+K+ KR LRV CGKR K G D +PE FEGRR+ P LR LK +K E A P + Sbjct: 341 NAYEFFNKVLRVDRKAVS--MDAKRSVFVGNLAFNATDDDVRSHFDKVLREDADTAAVESVRIIRDKVTHLGKGFGYVLFKDLSTAAKALSLHGSKMGKRELRVTVCGKRFKNTHG------DKKPE------------------------LKFEGRRAHPGAQLRLLKKRKAEEPADGAPPSK 492
BLAST of mRNA_C-tenellus_contig10532.1.2 vs. uniprot
Match: A0A024TR24_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TR24_9STRA) HSP 1 Score: 104 bits (260), Expect = 6.690e-20 Identity = 76/188 (40.43%), Postives = 97/188 (51.60%), Query Frame = 1 Query: 727 AICANGMEFGGKHIRVDCAAGGGVYDHIRTVFVGNLPMDSSDEEVRALFVSKL--EAGDSAVEGVRLVRDKSTLVGKGIGYILLADRALAAKALQLHGTKLRKRLLRVMPCGKRTKGRGGRVEGREDARPEERTGPAEVLSKKRRKSGSFSAEKFASFEGRRSVPDGFLRRLKNKKGFEAASSVPAKR 1284 A+ NG EF K +RVD D RTVFVGNL ++D++VR F L +A AVE VR++RDKST +GKG GY+L D + AAKAL LH +K+ KR +RV CGKR K GG + PE FEGRR+ P LR LK +K E + P+K+ Sbjct: 263 ALQLNGSEFFKKCLRVDRKNVS--MDAKRTVFVGNLAFTATDDDVRNHFEKALREDADTPAVESVRIIRDKSTHLGKGFGYVLFKDVSTAAKALSLHESKMGKREIRVTVCGKRFKNTGG------EKAPE------------------------LKFEGRRARPGAQLRMLKKRKAGELTDAPPSKK 418
BLAST of mRNA_C-tenellus_contig10532.1.2 vs. uniprot
Match: A0A485LPI4_9STRA (Aste57867_24108 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LPI4_9STRA) HSP 1 Score: 100 bits (249), Expect = 1.440e-18 Identity = 69/146 (47.26%), Postives = 87/146 (59.59%), Query Frame = 1 Query: 727 AICANGMEFGGKHIRVDCAAGGGVYDHIRTVFVGNLPMDSSDEEVRALFVSKLEAGDSA--VEGVRLVRDKSTLVGKGIGYILLADRALAAKALQLHGTKLRKRLLRVMPCGKRTKGRGG--RVEGREDARPEERTGPAEVLSKKR 1152 A+ NG EF K IRVD D R+VFVGN+ ++D++VR F L GD VE VRL+RDK+T +GKG GY+LL D + AAKAL L+G K+ KR LRV CGKR K G +V+G+ + R R G L KKR Sbjct: 233 ALALNGSEFCSKVIRVDRKTVS--MDAKRSVFVGNVAFTATDDDVRKHFEKALRDGDDTPVVESVRLIRDKTTHLGKGFGYVLLRDVSTAAKALALNGQKMGKRELRVTVCGKRFKNTQGEKKVDGKFEGR-RARPGAQMRLQKKR 375
BLAST of mRNA_C-tenellus_contig10532.1.2 vs. uniprot
Match: A0A7S3NNP6_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NNP6_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 2.820e-18 Identity = 54/127 (42.52%), Postives = 77/127 (60.63%), Query Frame = 1 Query: 724 QAICANGMEFGGKHIRVDCAAGGGVY---DHIRTVFVGNLPMDSSDEEVRALFVSKLEAGDSAVEGVRLVRDKSTLVGKGIGYILLADRALAAKALQLHG----------TKLRKRLLRVMPCGKRT 1065 +A+ ANG F +H+RVD + DH+RT F+GNLP D+ +E++RA F +L GD+A+ VR+VRD+ T +G GI Y+ L+D +L ALQL+G + L R LRV+PC K T Sbjct: 175 KALEANGRIFLDRHLRVDALSSSFSKKNNDHLRTAFIGNLPRDTDEEDLRAHFAQRLPGGDTAISAVRVVRDRITRIGIGIAYLTLSDPSLLPAALQLNGIPFLSSQQGESSLTPRKLRVLPCAKHT 301
BLAST of mRNA_C-tenellus_contig10532.1.2 vs. uniprot
Match: A0A6U4FX26_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4FX26_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 1.100e-17 Identity = 71/203 (34.98%), Postives = 103/203 (50.74%), Query Frame = 1 Query: 727 AICANGMEFGGKHIRVDCAAGG----GVYDHIRTVFVGNLPMDSSDEEVRALFVSKLEAG--DSAVEGVRLVRDKSTLVGKGIGYILLADRALAAKALQLHGTKLRKRLLRVMPCGKRTKGRGGRVEGREDARPEERTGPAEVLSKKRRKSGSFSAEKFASFEGRRSVP-DGFLRRLKN------KKGFEAASSVPAKRFKLS 1296 A A+G G +H+RV+ G G+++ ++F+GNLP + +E+VRA F L G D AV GVRL+RD+ T GKG GY+L RA A AL+L G K +R +R+ CG+R K + PA+V KK G + +FEG R+ G RRLK KK + ++ AK+ K++ Sbjct: 23 ATAADGRVVGERHLRVERLGGAAKRDGLFNAGESLFLGNLPWNVDEEDVRAKFNELLAEGHGDGAVRGVRLIRDRETQKGKGFGYVLFGSRAAVADALRLKGVKFGRREVRMQVCGRRYKSQN----------------PADVGEKK----GKKKRKAAEAFEGVRAADLSGAARRLKGAGKMGKKKTVKRSTGKLAKKAKIN 205 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10532.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10532.1.2 >prot_C-tenellus_contig10532.1.2 ID=prot_C-tenellus_contig10532.1.2|Name=mRNA_C-tenellus_contig10532.1.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=270bp MEFGGKHIRVDCAAGGGVYDHIRTVFVGNLPMDSSDEEVRALFVSKLEAGback to top mRNA from alignment at C-tenellus_contig10532:62..2896+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10532.1.2 ID=mRNA_C-tenellus_contig10532.1.2|Name=mRNA_C-tenellus_contig10532.1.2|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2835bp|location=Sequence derived from alignment at C-tenellus_contig10532:62..2896+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10532:62..2896+ >mRNA_C-tenellus_contig10532.1.2 ID=mRNA_C-tenellus_contig10532.1.2|Name=mRNA_C-tenellus_contig10532.1.2|organism=Choristocarpus tenellus KU2346|type=CDS|length=810bp|location=Sequence derived from alignment at C-tenellus_contig10532:62..2896+ (Choristocarpus tenellus KU2346)back to top |