mRNA_C-tenellus_contig1053.2.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig1053.2.1 vs. uniprot
Match: UPI00102CA003 (hypothetical protein n=1 Tax=Candidatus Magnetaquicoccus inordinatus TaxID=2496818 RepID=UPI00102CA003) HSP 1 Score: 96.3 bits (238), Expect = 9.910e-20 Identity = 68/163 (41.72%), Postives = 97/163 (59.51%), Query Frame = 1 Query: 76 ANYTSGNGTKELTFVYTVDQGDSTKRLDYVSPATSALSAPFGSILAVGSLQPVYSTSYVNATLSTPGEPGSLSYSSNISVDTTPPSVTSISTTRANGTYTVGAEIDVVVAFSAPVVLYRGNDTNLTPVMATVDLDISGMNGDRNATYARGNQTSELVFSYKVQ 564 A Y+SG+GT LTF YTV GDST LDYV ATS+L++ G++ ++ V TL TPG SL ++ I +DTT PSV+S+++T ANG+Y G ++V V FS + + + + TP L + + DRNA+YA G+ ++ LVFSY VQ Sbjct: 107 ATYSSGSGTTTLTFAYTVQAGDSTSDLDYV--ATSSLNSNGGTLQNGSAVDAVL-------TLPTPGAASSLGHNKAIVIDTTAPSVSSVTSTTANGSYKAGDTVNVTVTFSEAITV---DSSGGTPY-----LTLETGSTDRNASYASGSGSNTLVFSYTVQ 252
BLAST of mRNA_C-tenellus_contig1053.2.1 vs. uniprot
Match: UPI00102CDB3A (DUF4347 domain-containing protein n=1 Tax=Candidatus Magnetaquicoccus inordinatus TaxID=2496818 RepID=UPI00102CDB3A) HSP 1 Score: 93.6 bits (231), Expect = 8.730e-19 Identity = 67/163 (41.10%), Postives = 95/163 (58.28%), Query Frame = 1 Query: 76 ANYTSGNGTKELTFVYTVDQGDSTKRLDYVSPATSALSAPFGSILAVGSLQPVYSTSYVNATLSTPGEPGSLSYSSNISVDTTPPSVTSISTTRANGTYTVGAEIDVVVAFSAPVVLYRGNDTNLTPVMATVDLDISGMNGDRNATYARGNQTSELVFSYKVQ 564 A Y SG+GT LTF YTV GD+T LDYVS TS+L+A G++ ++ V TL TPG SL ++ I +DTT P+++S+S + ANG+Y G ++V V FS V + + + TP + + + DRNATYA G+ ++ LVFSY VQ Sbjct: 815 ATYASGSGTTTLTFAYTVQAGDNTSDLDYVS--TSSLNANGGTLQNGSAVAAVL-------TLPTPGAASSLGHNKAIIIDTTAPTLSSVSASSANGSYKAGDTVNVTVTFSEAVTV---DSSGGTPYIT-----LETGSTDRNATYASGSGSTTLVFSYTVQ 960
BLAST of mRNA_C-tenellus_contig1053.2.1 vs. uniprot
Match: D7G8I0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8I0_ECTSI) HSP 1 Score: 93.6 bits (231), Expect = 9.110e-19 Identity = 67/171 (39.18%), Postives = 90/171 (52.63%), Query Frame = 1 Query: 109 LTFVYTVDQGDSTKRLDYVSPATSALSAPFGSILAVGSLQPVYSTSYVNATLSTPGEPGSLSYSSNISVDTTPPSVTSISTTRANGTYTVGAEIDVVVAFSAPVVLYRGND--TNLTPV------------------MATVDLDISGMNGDRNATYARGNQTSELVFSYKV 561 L F Y V +G T L+ S AL+ G++ L Y+TS +N TL GEP SLSY I +DTT P+V + ++T+ NGTY A I + V FS+PVV+ G D N T + + LD SG NGD+NATYA GN T++L+F Y+V Sbjct: 885 LVFTYAVQEGHETAALEVAS--AYALN---GTVR----LNATYATSSINITLPEAGEPESLSYDRTIEIDTTAPAVLNATSTQPNGTYATSAVIGITVRFSSPVVVVNGGDYPANCTAGGSGDGSSSSDGDVAWCEGLPVLQLDASGENGDKNATYAGGNGTADLLFEYEV 1046
BLAST of mRNA_C-tenellus_contig1053.2.1 vs. uniprot
Match: A0A6H5L8H6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8H6_9PHAE) HSP 1 Score: 91.3 bits (225), Expect = 5.630e-18 Identity = 65/172 (37.79%), Postives = 88/172 (51.16%), Query Frame = 1 Query: 109 LTFVYTVDQGDSTKRLDYVSPATSALSAPFGSILAVGSLQPVYSTSYVNATLSTPGEPGSLSYSSNISVDTTPPSVTSISTTRANGTYTVGAEIDVVVAFSAPVVLYRGND--TNLTPV------------------MATVDLDISGMNGDRNATYARGNQTSELVFSYKVQ 564 L F Y V +G T L+ S + AL+ L Y+TS +N TL GEP SLSY I +DTT P+V + ++T+ NGTY A I V V FS+PVV+ G D N T + + LD SG +GD+NATYA GN T++L+F Y+ + Sbjct: 190 LVFTYAVQEGHETAALEVAS--SYALNGTVH-------LNATYATSSINITLPEAGEPESLSYDRTIEIDTTAPAVLNATSTQPNGTYATSAVIGVTVRFSSPVVVVNGGDYPANCTAGGSGDGSSSSDGDAAWCEGLPVLQLDASGEHGDKNATYAGGNGTADLLFEYEAR 352
BLAST of mRNA_C-tenellus_contig1053.2.1 vs. uniprot
Match: A0A1F3Y2P6_9PROT (Uncharacterized protein n=1 Tax=Bdellovibrionales bacterium RIFOXYD1_FULL_53_11 TaxID=1797403 RepID=A0A1F3Y2P6_9PROT) HSP 1 Score: 85.5 bits (210), Expect = 5.570e-16 Identity = 62/162 (38.27%), Postives = 85/162 (52.47%), Query Frame = 1 Query: 79 NYTSGNGTKELTFVYTVDQGDSTKRLDYVSPATSALSAPFGSILAVGSLQPVYSTSYVNATLSTPGEPGSLSYSSNISVDTTPPSVTSISTTRANGTYTVGAEIDVVVAFSAPVVLYRGNDTNLTPVMATVDLDISGMNGDRNATYARGNQTSELVFSYKVQ 564 NYTSG+ T LTF YTV GD++ LDYV AT++L+A A G+ TL+ PG GS++ + I +DTT P+V+S+S+T+AN TYT G ID+ V F T V+ T + + D+ Y G+ TS L F Y VQ Sbjct: 83 NYTSGSTTSVLTFQYTVQAGDTSSDLDYV--ATTSLTAGTTIKDAAGN--------DATLTLAAPGAAGSIANAKAIVIDTTAPAVSSVSSTKANATYTTGEVIDITVTF-----------TEAVTVVGTPTITLETGASDQTVNYTSGSTTSVLTFQYTVQ 223
BLAST of mRNA_C-tenellus_contig1053.2.1 vs. uniprot
Match: A0A7S3US65_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3US65_HETAK) HSP 1 Score: 83.6 bits (205), Expect = 8.160e-16 Identity = 60/162 (37.04%), Postives = 87/162 (53.70%), Query Frame = 1 Query: 76 ANYTSGNGTKELTFVYTVDQGDSTKRLDYVSPATSALSAPFGSILAVGSLQPVYSTSYVNATLSTPGEPGSLSYSSNISVDTTPPSVTSISTTRANGTYTVGAEIDVVVAFSAPVVLYRGNDTNLTPVMATVDLDISGMNGDRNATYARGNQTSELVFSYKV 561 A+Y SG+GT+ + F+YTV+ GDS+ LD+ P + LS + SI A G S+ Y + ++ G+PGS+SY S+I +DT V + + + NG Y G EI+++V FS V ++ P M LD+ N ATY GN T L F Y V Sbjct: 85 ASYFSGSGTQLIRFLYTVEIGDSSTDLDHDDPFSLMLSNDYTSIAASGD-----SSQYASIYVAAAGDPGSMSYFSDIQIDTNQTYVDYLDSDKQNGEYGAGEEIELLVHFSTEVTVFE------PPEMY---LDVGDENSYAIATYISGNNTDTLTFLYTV 232
BLAST of mRNA_C-tenellus_contig1053.2.1 vs. uniprot
Match: A0A7K4H849_9ARCH (Right-handed parallel beta-helix repeat-containing protein (Fragment) n=1 Tax=Candidatus Lokiarchaeota archaeon TaxID=2053489 RepID=A0A7K4H849_9ARCH) HSP 1 Score: 82.8 bits (203), Expect = 4.590e-15 Identity = 60/164 (36.59%), Postives = 83/164 (50.61%), Query Frame = 1 Query: 70 AVANYTSGNGTKELTFVYTVDQGDSTKRLDYVSPATSALSAPFGSILAVGSLQPVYSTSYVNATLSTPGEPGSLSYSSNISVDTTPPSVTSISTTRANGTYTVGAEIDVVVAFSAPVVLYRGNDTNLTPVMATVDLDISGMNGDRNATYARGNQTSELVFSYKV 561 AV +YTSG+ T L+F YTV ++ LDY+S T AL G+I + + N TL PG GSLS++ NI VD PSV S+S+T+A+G YT G EI++ + FS + V T L + Y GN+T L+F+Y V Sbjct: 564 AVVDYTSGSATNTLSFNYTVALDHNSTDLDYIS--TGALDLNSGTIKGIVG-------NNANITLPAPGASGSLSFNRNIIVDAKTPSVNSVSSTKADGFYTTGEEINITITFS-----------EIVYVTGTPQLTLETGGAGATVDYTSGNKTDTLIFTYTV 707
BLAST of mRNA_C-tenellus_contig1053.2.1 vs. uniprot
Match: UPI0012E37A22 (fibronectin type III domain-containing protein n=1 Tax=Stenotrophomonas sp. KCTC 12332 TaxID=1793721 RepID=UPI0012E37A22) HSP 1 Score: 82.4 bits (202), Expect = 6.090e-15 Identity = 64/168 (38.10%), Postives = 82/168 (48.81%), Query Frame = 1 Query: 61 ATYAVANYTSGNGTKELTFVYTVDQGDSTKRLDYVSPATSALSAPFGSILAVGSLQPVYSTSYVNATLSTPGEPGSLSYSSNISVDTTPPSVTSISTTRANGTYTVGAEIDVVVAFSAPVVLYRGNDTNLTPVMATVDLDISGMNGDRNATYARGNQTSELVFSYKVQ 564 AT NY SG G+ LTF YTV GD+T LDY+S ALS GS + + TL++PG P SL + + VD P+VTS++++ ANG Y V I + V FS V+ V T L + DR YA G+ TS L FSY VQ Sbjct: 268 ATDRTVNYVSGTGSSSLTFTYTVQAGDATADLDYISTTALALS---------GSTIRDAAGNNAILTLASPGAPNSLGNNKALVVDGVVPTVTSVNSSTANGAYKVDDVISIQVNFSEAVI-----------VTGTPQLTLETGASDRAINYASGSGTSTLTFSYAVQ 415
BLAST of mRNA_C-tenellus_contig1053.2.1 vs. uniprot
Match: A0A7K4HJX8_9ARCH (Uncharacterized protein n=1 Tax=Candidatus Lokiarchaeota archaeon TaxID=2053489 RepID=A0A7K4HJX8_9ARCH) HSP 1 Score: 81.3 bits (199), Expect = 1.530e-14 Identity = 65/165 (39.39%), Postives = 92/165 (55.76%), Query Frame = 1 Query: 70 AVANYTSGNGTKELTFVYTVDQGDSTKRLDYVSPATSALSAPFGSIL-AVGSLQPVYSTSYVNATLSTPGEPGSLSYSSNISVDTTPPSVTSISTTRANGTYTVGAEIDVVVAFSAPVVLYRGNDTNLTPVMATVDLDISGMNGDRNATYARGNQTSELVFSYKV 561 AV +YTSGNGT LTF YTV G ++ LDY S +ALS GSI +VG+ + TL TPG GSL + ++ +D T P++TS+S+T+ +G YTVG ID+ ++FS V D TP + T++ + D Y G+ T+ L F+Y V Sbjct: 449 AVVDYTSGNGTSTLTFTYTVTSGHTSSDLDYES--VNALSLNGGSIKDSVGNDAVL--------TLPTPGIAGSLGSNKDLIIDATDPAITSVSSTKTDGIYTVGETIDITISFSESV------DVTGTPQL-TLETGVV----DAVVDYTSGSGTTILTFTYIV 592
BLAST of mRNA_C-tenellus_contig1053.2.1 vs. uniprot
Match: UPI000A61D9E4 (DUF4347 domain-containing protein n=1 Tax=Acidovorax sp. Root219 TaxID=1736493 RepID=UPI000A61D9E4) HSP 1 Score: 80.5 bits (197), Expect = 2.920e-14 Identity = 60/162 (37.04%), Postives = 81/162 (50.00%), Query Frame = 1 Query: 79 NYTSGNGTKELTFVYTVDQGDSTKRLDYVSPATSALSAPFGSILAVGSLQPVYSTSYVNATLSTPGEPGSLSYSSNISVDTTPPSVTSISTTRANGTYTVGAEIDVVVAFSAPVVLYRGNDTNLTPVMATVDLDISGMNGDRNATYARGNQTSELVFSYKVQ 564 NYTSG+GT ELTF YTV GD+ LDY+ AL+ G+++ + TL+ PG SL + I +DTT P+V S++++ ANGTY VG + + V FS V V T L + DR Y G+ TS L F+Y VQ Sbjct: 339 NYTSGSGTSELTFTYTVQAGDTAADLDYLGITALALNG--------GTIKDTAGNAST-LTLAAPGAANSLGNNKAIVIDTTAPTVASVNSSAANGTYKVGNTVSLQVNFSEAVT-----------VTGTPQLTLEIGTTDRAVNYTSGSGTSALTFTYTVQ 480 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig1053.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig1053.2.1 >prot_C-tenellus_contig1053.2.1 ID=prot_C-tenellus_contig1053.2.1|Name=mRNA_C-tenellus_contig1053.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=188bp TSTTNGNITSSANTTGAIGWATYAVANYTSGNGTKELTFVYTVDQGDSTKback to top mRNA from alignment at C-tenellus_contig1053:2474..4308- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig1053.2.1 ID=mRNA_C-tenellus_contig1053.2.1|Name=mRNA_C-tenellus_contig1053.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1835bp|location=Sequence derived from alignment at C-tenellus_contig1053:2474..4308- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig1053:2474..4308- >mRNA_C-tenellus_contig1053.2.1 ID=mRNA_C-tenellus_contig1053.2.1|Name=mRNA_C-tenellus_contig1053.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=564bp|location=Sequence derived from alignment at C-tenellus_contig1053:2474..4308- (Choristocarpus tenellus KU2346)back to top |