mRNA_C-tenellus_contig10520.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10520.1.1 vs. uniprot
Match: A0A6A5AK20_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AK20_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 5.910e-12 Identity = 43/115 (37.39%), Postives = 67/115 (58.26%), Query Frame = 2 Query: 176 KPVLSDQQKVNRVGFVISHMHREASGVFVDDLYG*V---EKWFFILKDRQGVYLHPAEDPPKPPLSQNKSYSTKVVFLEAVSRPR-KLSNRM*FNGKIGIPPIVDTMVAQHSSKH 508 KP+L++ R+ +S + + G D++Y V EKWF + ++ Y + ED PK L ++K Y TKV+FL AV+RPR + F+GKIGI P V+T++AQ S++ Sbjct: 15 KPLLTEANTKTRMEHALSFLRPSSKGTIFDNMYSFVHVDEKWFNLTTVKKAFYAYEDEDLPKRRL-KSKRYITKVMFLAAVTRPRYDHHKKCIFDGKIGIWPFVETVLAQRLSRN 128
BLAST of mRNA_C-tenellus_contig10520.1.1 vs. uniprot
Match: W4G4M0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G4M0_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 4.720e-11 Identity = 40/113 (35.40%), Postives = 68/113 (60.18%), Query Frame = 2 Query: 176 KPVLSDQQKVNRVGFVISHMHREASGVFVDDLYG*V---EKWFFILKDRQGVYLHPAEDPPKPPLSQNKSYSTKVVFLEAVSRPRKLSNRM*F-NGKIGIPPIVDTMVAQHSS 502 KP L+D K+NR+ ++ + ++ D + V EKWF++ ++ Y + E+ PK L ++K Y TKV+FL +V+RPR ++ F +GKIGI P V+T++A+ +S Sbjct: 145 KPYLTDANKINRMKHALAFLQPSSNETIFDSMNSYVHVDEKWFYLTTVKKCFYAYDDEELPKRQL-KSKRYITKVMFLASVARPRYDPHKKGFFDGKIGIWPFVETVIAKRNS 256
BLAST of mRNA_C-tenellus_contig10520.1.1 vs. uniprot
Match: A0A6A4E0R9_9STRA (Uncharacterized protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4E0R9_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 1.170e-10 Identity = 42/117 (35.90%), Postives = 70/117 (59.83%), Query Frame = 2 Query: 176 KPVLSDQQKVNRVGF---VISHMHREASGVFVD--DLYG*VEKWFFILKDRQGVYLHPAEDPPKPPLSQNKSYSTKVVFLEAVSRPR-KLSNRM*FNGKIGIPPIVDTMVAQHSSKH 508 KP+L+ + R F ++ + E FVD ++ EKWF++ ++R YL E P+ +++NK++ TKV+FL AV+RPR RM F+GK+G+ P+V+T +A +SK+ Sbjct: 126 KPLLTPEHMAKRRQFARSLVKKLPGERGYEFVDMQNVVHVDEKWFYVHRNRNTYYLTRGETAPRA-VTKNKNHRTKVMFLVAVARPRYDAQQRMTFDGKVGLWPVVETKLAVRNSKN 241
BLAST of mRNA_C-tenellus_contig10520.1.1 vs. uniprot
Match: A0A6A4ZT35_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZT35_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 1.780e-10 Identity = 39/113 (34.51%), Postives = 67/113 (59.29%), Query Frame = 2 Query: 176 KPVLSDQQKVNRVGFVISHMHREASGVFVDDLYG*V---EKWFFILKDRQGVYLHPAEDPPKPPLSQNKSYSTKVVFLEAVSRPRKLSNRM*F-NGKIGIPPIVDTMVAQHSS 502 KP L+D K+ R+ ++ + ++ D + V EKWF++ ++ Y + E+ PK L ++K + TKV+FL AV+RPR ++ F +GKIGI P V+T++A+ +S Sbjct: 15 KPYLTDANKITRMKHALAFLQPSSNETIFDSMNSYVHVDEKWFYLTTVKKCFYAYDDEELPKRQL-KSKRFITKVMFLAAVARPRYDPHKKGFFDGKIGIWPFVETVIAKRNS 126
BLAST of mRNA_C-tenellus_contig10520.1.1 vs. uniprot
Match: A0A024UBD8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UBD8_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 1.410e-9 Identity = 40/113 (35.40%), Postives = 62/113 (54.87%), Query Frame = 2 Query: 173 IKPVLSDQQKVNRVGFVISHMHREASGVFVDDLYG*V---EKWFFILKDRQGVYLHPAEDPPKPPLSQNKSYSTKVVFLEAVSRPRKLSNRM*FNGKIGIPPIVDTMVAQHSS 502 +KP+L+D K R + +S H + D + V EKWF + + + +L P ED P ++NK Y V+FL A++RPR + + F+GK+GI P V+ +VAQ S Sbjct: 33 LKPMLTDSNKEARKRYALSFTHVVDGTITFDSMMDRVFLDEKWFNLRQVKNKYFLAPWEDAPHQS-TKNKRYIPSVMFLTAIARPRMVDG-VYFDGKLGIWPFVEVVVAQRRS 143
BLAST of mRNA_C-tenellus_contig10520.1.1 vs. uniprot
Match: A0A485KSH5_9STRA (Aste57867_11065 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KSH5_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 6.420e-9 Identity = 45/125 (36.00%), Postives = 66/125 (52.80%), Query Frame = 2 Query: 173 IKPVLSDQQKVNRVGFVISHMHREASGVFV---------DDLYG*V---EKWFFILKDRQGVYLHPAEDPPKPPLSQNKSYSTKVVFLEAVSRPR-KLSNRM*FNGKIGIPPIVDTMVAQHSSKH 508 +KP+LSD+ K+ R+ F S++ REA D++ V EKWF DR+ VYL P E+P K + K + KV+FL V+ PR + F+GKIG+ PIV A +S++ Sbjct: 128 LKPLLSDEHKLERITFCKSYVRREAPDTIALLAGQEFEFFDMWDAVHLDEKWFNADIDRRKVYLVPGEEP-KRRACKFKRFLPKVMFLAVVAHPRFNIEGECEFDGKIGLWPIVKYAPAIRNSRN 251
BLAST of mRNA_C-tenellus_contig10520.1.1 vs. uniprot
Match: W2NW41_PHYPR (HTH_Tnp_Tc3_2 domain-containing protein n=4 Tax=Phytophthora parasitica TaxID=4792 RepID=W2NW41_PHYPR) HSP 1 Score: 65.1 bits (157), Expect = 6.490e-9 Identity = 43/117 (36.75%), Postives = 67/117 (57.26%), Query Frame = 2 Query: 173 IKPVLSDQQKVNRVGFVISHMHREASG--VFVD--DLYG*VEKWFFILKDRQGVYLHPAEDPPKPPLSQNKSYSTKVVFLEAVSRPRKLSNR-M*FNGKIGIPPIVDTMVAQHSSKH 508 +KP L+++ ++ RV F +SH R+ G VF D D+ EKWF DR+ YL E+ P Q+K + +K +F+ AV+RPR ++R F+GKIGI + A+ +SK+ Sbjct: 129 VKPALTEENRLARVQFALSHTTRKRGGEMVFADMFDVVHIDEKWFNEDTDRKCYYLDADEEEPVRQ-RQSKRFISKTMFIAAVARPRYDAHRKQAFDGKIGIWAFAEEYEAKRTSKN 244
BLAST of mRNA_C-tenellus_contig10520.1.1 vs. uniprot
Match: W2QAD0_PHYPN (Uncharacterized protein n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2QAD0_PHYPN) HSP 1 Score: 64.3 bits (155), Expect = 1.010e-8 Identity = 43/117 (36.75%), Postives = 67/117 (57.26%), Query Frame = 2 Query: 173 IKPVLSDQQKVNRVGFVISHMHREASG--VFVD--DLYG*VEKWFFILKDRQGVYLHPAEDPPKPPLSQNKSYSTKVVFLEAVSRPRKLSNR-M*FNGKIGIPPIVDTMVAQHSSKH 508 +KP L+++ ++ RV F +SH R+ G VF D D+ EKWF DR+ YL E+ P Q+K + +K +F+ AV+RPR ++R F+GKIGI + A+ +SK+ Sbjct: 33 VKPALTEENRLARVQFELSHTTRKRGGEVVFADMFDVVHIDEKWFNEDTDRKCYYLDADEEEPVRQ-RQSKRFISKTMFIAAVARPRYDAHRKQAFDGKIGIWAFAEEYEAKRTSKN 148
BLAST of mRNA_C-tenellus_contig10520.1.1 vs. uniprot
Match: UPI001C268D4E (uncharacterized protein LOC121801146 n=1 Tax=Salvia splendens TaxID=180675 RepID=UPI001C268D4E) HSP 1 Score: 63.9 bits (154), Expect = 1.260e-8 Identity = 41/124 (33.06%), Postives = 69/124 (55.65%), Query Frame = 2 Query: 173 IKPVLSDQQKVNRVGFVISHM-----------HREASGVFVDDLYG*VEKWFFILKDRQGVYLHPAEDPPKPPLSQNKSYSTKVVFLEAVSRPRKLSN-RM*FNGKIGIPPIVDTMVAQHSSKH 508 +KP L++ K+ R+ + +H+ H + V +D EKWF++ K YL P ED P ++K +STKV+F+ AVSRP S+ + F+GKIG+ P ++ ++A+ +SK+ Sbjct: 39 VKPTLTEANKIARMKWCPAHIQPTLAEGKLLYHSMHNIVHID------EKWFYMTKASDRYYLLPDEDEPYRSY-KSKRFSTKVMFMAAVSRPLIGSDGEIIFDGKIGLFPFIEEVLAKRNSKN 155
BLAST of mRNA_C-tenellus_contig10520.1.1 vs. uniprot
Match: A0A397E5D7_9STRA (HTH_Tnp_Tc3_2 domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397E5D7_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 7.300e-8 Identity = 47/140 (33.57%), Postives = 66/140 (47.14%), Query Frame = 2 Query: 173 IKPVLSDQQKVNRVGFVISHMHR-------EASGVFV----DDLYG*V----------------EKWFFILKDRQGVYLHPAEDPPKPPLSQNKSYSTKVVFLEAVSRPR-KLSNRM*FNGKIGIPPIVDTMVAQHSSKH 508 +KP+L+D + RVGF SH+ R EA+ D YG EKWF KDR+ VYL E P K ++K + KV+FL AV+RP+ + F+GKIG+ P + A SS++ Sbjct: 127 LKPMLTDANRAERVGFCRSHVRRIAATSLAEAAATVTAFGGDSGYGSALVELPFSDMIDVVHLDEKWFNADKDRRKVYLTKGETP-KGRACKSKRFIPKVMFLAAVARPQFDADGNLVFDGKIGMWPFITMTPAARSSRN 265 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10520.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10520.1.1 >prot_C-tenellus_contig10520.1.1 ID=prot_C-tenellus_contig10520.1.1|Name=mRNA_C-tenellus_contig10520.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=109bp MARSRSGFSSSKIGKVYTYTPLRTPPNPHCHRIRVTVRRWCSLKLCPALGback to top mRNA from alignment at C-tenellus_contig10520:836..1434+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10520.1.1 ID=mRNA_C-tenellus_contig10520.1.1|Name=mRNA_C-tenellus_contig10520.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=599bp|location=Sequence derived from alignment at C-tenellus_contig10520:836..1434+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10520:836..1434+ >mRNA_C-tenellus_contig10520.1.1 ID=mRNA_C-tenellus_contig10520.1.1|Name=mRNA_C-tenellus_contig10520.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=327bp|location=Sequence derived from alignment at C-tenellus_contig10520:836..1434+ (Choristocarpus tenellus KU2346)back to top |