mRNA_C-tenellus_contig10509.1.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig10509.1.1
Unique NamemRNA_C-tenellus_contig10509.1.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig10509.1.1 vs. uniprot
Match: D7FXE1_ECTSI (WD repeat-containing protein 60 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXE1_ECTSI)

HSP 1 Score: 201 bits (510), Expect = 1.600e-53
Identity = 172/474 (36.29%), Postives = 220/474 (46.41%), Query Frame = 1
Query:    1 KVPQLDQEVQFHLGHDDTDLENLMAHIRSTRH----------SGSANPVPDVLHSSQDIRDESVGHGSV-HESVLSRTGKRNQTD---KKVELGQEGEDAEATSAK------------HLRLGRFLRQACEVMETLCEENI--------------------------------GSWTGGRRGEG---------------------VSEDEGNEGAPSAFRVGVGNAWRELGVEAETGQGLQRLIGGASVAAVAFSRTKRSMLVTAHTR-LGRE------------------EGVLEGCDVVCVWNSQDSGTLPAKVLIGEGSITSIGLGLTQPHLVMSGTREGNVILWDLREPALASWS-EGHTLGLSCGIRAVTYSTSFMASNTSATAGRVLRDESTFLLPSSHGHSSAVMSVVPIPSHGVGGGVGEGGGVLGGALSLSKEVGTFQVASLDDRGVVCLWVVSELGHIEEGGSQ 1125
            ++ Q  +EVQFHLGHDDT LENLM  +RS R            G       V+   +D+     G  +   + + +  G    TD   ++    + G D + +S +             LRLG+FLRQA  VMETLCEEN+                                 S  GGR GEG                      +ED G+  A    R G G+  R  G      +G   L+ G+ V  V FS+ KRSMLVTAH R +GR                   E VLEGC VVCVWN+++    P  VL GEG  + + L   Q H+V++GT EG ++LWDLRE A    + E   LGL CGIRA TY           TAG   R E   L  +  GHSS V+SVV IPS   G G+  GGG +GG +SL     +FQVASLDDRG V +W+ SE+   +EGGSQ
Sbjct:  444 EIVQSHKEVQFHLGHDDTALENLMRRLRSNRRPPERHQAKGEEGGQTQQRTVVDGGEDVPASGPGSATTTFKGIYNGNGMVAGTDPGEQEYPAPRYGTDFDGSSGRVSSAGGSDTLPPPLRLGKFLRQASVVMETLCEENLLHAPVKRRGGSHPLDPARGEHEDAVGRERGALFSGAGGREGEGWEEVXXXXXXXXXXXXXATAAATEDTGSSTAEEKRRQG-GDEGRVRG------RGAGALLEGSEVVGVEFSKVKRSMLVTAHARPVGRRXXXXXXXXXXXXXXTDEREAVLEGCGVVCVWNTENVQGAPVSVLCGEGLFSCLCLARHQAHVVITGTEEGCLLLWDLRETASEGRAAESRELGLHCGIRAPTY----------VTAGGDGRGEDGGLSKAGCGHSSKVVSVVAIPSPTGGVGMDGGGGGIGGMISLGDAC-SFQVASLDDRGTVSIWLASEVPRGDEGGSQ 899          
BLAST of mRNA_C-tenellus_contig10509.1.1 vs. uniprot
Match: A0A7S3XQJ7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQJ7_HETAK)

HSP 1 Score: 100 bits (249), Expect = 2.290e-19
Identity = 107/394 (27.16%), Postives = 170/394 (43.15%), Query Frame = 1
Query:    1 KVPQLDQEVQFHLGHDDTDLENLMAHIRSTRHSGSANPVPDVLHSSQDIRDESVGHGSVHESVLSRTGKRNQTDKKVELGQEGEDAEATSAKHLRLGRFLRQACEVMETLCEENIGSWTGGRRGEGVS-EDEGNEGAPSAFRVGVGNAWRELGVEAETG-QGLQRLIGGASVAAVAFSRTKRSMLVTAHTRLGRE------EGVLEGCDVVCVWNSQDSGTLPAKVLIGEGSITSIGLGLTQPHLVMSGTREGNVILWDLREPALASWSEGH----TLGLSCG---IRAVTYSTSFMASNTSATAGRVLRDESTFLLPSSHGHSSAVMSVVPIPSHGVGGGVGEGGGVLGGALSLSK-----EVGTFQVASLDDRGVVCLWVVSELGHIEEGGS 1122
            +V   DQE QF LG DDTD EN++A +R+                           G   E  + R G  +Q +                A  LRL  F++ A +V E +CE+N   +      +  S ED+G   + S +++ +G   R L   + +  + +  ++    +  + FS  + +M  +++    +E         L+   ++CVW++ +    P+++ I    ++   +GL Q HLVM+GT +G V+LWDLRE      ++G     T    C    IR+ TY        TSA+ G           P    HSS V+ + PIP                    LSK        +FQ+A+LDDRGV+ LW+V+EL  +E GGS
Sbjct:   78 EVETADQEAQFQLG-DDTDFENVLAALRA---------------------------GEGIERFVKRRGNLSQGN----------------AASLRLSTFIQAASQVCEAVCEKNFEQYKKHFEEDSESKEDQGLFTSASKWKI-LGQGGRRLSNTSPSARENIGSVLAQRELTGLVFSTLQPNMACSSYMLRSKEYFNEDETDDLKDYGLICVWDTLNP-EKPSRLGICRVGVSCCAMGLFQTHLVMAGTTDGQVLLWDLRENKREILAQGDPIQKTANSLCSEGVIRSPTY--------TSASLG-----------PHIKSHSSKVVDITPIPVE-----------------ILSKPHQGPSQASFQIATLDDRGVLALWLVTELEKVELGGS 389          
BLAST of mRNA_C-tenellus_contig10509.1.1 vs. uniprot
Match: UPI00147E4739 (WD repeat-containing protein 60 n=1 Tax=Pangasianodon hypophthalmus TaxID=310915 RepID=UPI00147E4739)

HSP 1 Score: 87.4 bits (215), Expect = 5.090e-15
Identity = 86/295 (29.15%), Postives = 131/295 (44.41%), Query Frame = 1
Query:  250 EDAEATSAKHLRLGRFLRQACEVMETLCEENIGSWTGGRRGEGVSEDEGNEGAPSAFRVGVGNAWRELGVEAETGQGLQRLIGGASVAAVAFSRTKRSMLVTAHT-RLGREEGVLEGCDVVCVWNSQDSGTLPAKVLIGEGSITSIGLGLTQPHLVMSGTREGNVILWDLREPALASWSEGHTLGLSCGIRAVTYSTSFMASNTSATAGRVLRDESTFLLPSSHGHSSAVMSVVPIPSHGVGGGVGEGGGVLGGALSLSKE-VG-TFQVASLDDRGVVCLWVVSELGHIEEGGSQ 1125
            E    TS    RL  FLR A +VM  L EENI      ++ +  +    N     +F  G      +L            L+ G  V  + FS+T+   L++ H+ R G  +  L+   ++CVWN  +  T P ++L+ E  + S      +  LV +GT  G+V++WDLRE +  S S          +R  T+ST  + S                      GH S+V+SV P+        V  G G+    L   +E +G +FQ+ SLD+ G++ LWVV EL   ++ GSQ
Sbjct:  222 ESVTRTSVDSKRLAAFLRSATQVMAVLLEENISENNSVKKLQSETHTRTN-----SFSDGCVQLNTQL-----------NLLQGRQVTLLRFSQTQTHTLLSVHSPRSGSSDVTLDSKTLICVWNIWEPST-PQRILVCEAEVRSCCFSPGKATLVFAGTDVGSVLVWDLREHS-GSHSHIRVCEEEWTLRHPTFSTDAVMSGA--------------------GHFSSVVSVEPVL-------VSVGAGLRDPLLPDQEESLGLSFQLGSLDETGLLNLWVVVELPKADDSGSQ 471          
BLAST of mRNA_C-tenellus_contig10509.1.1 vs. uniprot
Match: A0A5N5PH66_PANHP (Uncharacterized protein n=1 Tax=Pangasianodon hypophthalmus TaxID=310915 RepID=A0A5N5PH66_PANHP)

HSP 1 Score: 87.4 bits (215), Expect = 6.090e-15
Identity = 86/295 (29.15%), Postives = 131/295 (44.41%), Query Frame = 1
Query:  250 EDAEATSAKHLRLGRFLRQACEVMETLCEENIGSWTGGRRGEGVSEDEGNEGAPSAFRVGVGNAWRELGVEAETGQGLQRLIGGASVAAVAFSRTKRSMLVTAHT-RLGREEGVLEGCDVVCVWNSQDSGTLPAKVLIGEGSITSIGLGLTQPHLVMSGTREGNVILWDLREPALASWSEGHTLGLSCGIRAVTYSTSFMASNTSATAGRVLRDESTFLLPSSHGHSSAVMSVVPIPSHGVGGGVGEGGGVLGGALSLSKE-VG-TFQVASLDDRGVVCLWVVSELGHIEEGGSQ 1125
            E    TS    RL  FLR A +VM  L EENI      ++ +  +    N     +F  G      +L            L+ G  V  + FS+T+   L++ H+ R G  +  L+   ++CVWN  +  T P ++L+ E  + S      +  LV +GT  G+V++WDLRE +  S S          +R  T+ST  + S                      GH S+V+SV P+        V  G G+    L   +E +G +FQ+ SLD+ G++ LWVV EL   ++ GSQ
Sbjct:  566 ESVTRTSVDSKRLAAFLRSATQVMAVLLEENISENNSVKKLQSETHTRTN-----SFSDGCVQLNTQL-----------NLLQGRQVTLLRFSQTQTHTLLSVHSPRSGSSDVTLDSKTLICVWNIWEPST-PQRILVCEAEVRSCCFSPGKATLVFAGTDVGSVLVWDLREHS-GSHSHIRVCEEEWTLRHPTFSTDAVMSGA--------------------GHFSSVVSVEPVL-------VSVGAGLRDPLLPDQEESLGLSFQLGSLDETGLLNLWVVVELPKADDSGSQ 815          
BLAST of mRNA_C-tenellus_contig10509.1.1 vs. uniprot
Match: A0A835Z6D0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6D0_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 3.440e-14
Identity = 114/426 (26.76%), Postives = 160/426 (37.56%), Query Frame = 1
Query:   16 DQEVQFHLGHDDTDLENLMAHIRST-----------RHSGSANPVPDVLHSSQDIRDESVGHGSVHESVLSRTGKRNQTDKKVELGQEGEDAEATSAK------------HLRLGRFLRQACEVMETLCEENIGSWTGGR----RGEGVSEDEG--NEGAPSAFRVGVGNAWRELGVEAETGQG-----------LQRLIGGASVAAVAFSRTKRSMLVTAHTRLGREEGVLEGCDVVCVWNSQDS-------GTLPAK----VLIGEGSITSIGLG-LTQPHLVMSGTREGNVILWDLREPALASWSEGHTLGLSCGIRAVTYSTSFMASNTSATAGRVLRDESTFLLPSSHGHSSAVMSVVPIPSHGVGGGVGEGGGVLGGALSLSKEVGTFQVA-----SLDDRGVVCLWVVSELGHIEEGGS 1122
            D E QFH+G DDT LEN++A  R+            R  GS   V   L +         G G          G     D++     +  +AE  +A+              RL  FLR    V+E LC ENI + +GG       E  + DEG  +  A  AF      +W  LG                   L+  + GAS AA+A+S  +  +L  A+ R             VCVW ++ +        + PA     VL+ EG+ T +  G    PHL ++G  +G V LWDLR P             +CG+R  TY          ATA R           ++ GH+SAV                                G F+ A     SLDDRGVV +W+  ++   ++GGS
Sbjct:  290 DAEAQFHMGSDDTALENMLARARARXXXXXXXXXXHRRQGSDPGV--TLTAXXXXXXXXTGEGE---------GVYEHGDREAPGTVDAAEAEERAAQLRXXXXXXXXXGGARLAHFLRSVAPVVEALCVENI-ALSGGSAALAEAEARARDEGERDRAAGRAFASEATTSWERLGAAXXXXXXXXXDDWAVEPWLRTALAGASAAALAYSAARPPLLAVAYARSAXXXXXXXXXXAVCVWGARAAPLAGDTDASRPAAPLAAVLVAEGAPTCVCWGPAAAPHLCLAGAADGVVALWDLRTPCGGXXXXXXXERPACGLRRPTY----------ATAPR----------SAAGGHASAVAXXXXXXXXXX---------XXXXXXXXXXXXGLFRAAATAFASLDDRGVVIVWLAMDV--TDDGGS 672          
BLAST of mRNA_C-tenellus_contig10509.1.1 vs. uniprot
Match: A0A8C5HJQ1_9TELE (WD repeat domain 60 n=6 Tax=Gouania willdenowi TaxID=441366 RepID=A0A8C5HJQ1_9TELE)

HSP 1 Score: 84.3 bits (207), Expect = 6.380e-14
Identity = 101/365 (27.67%), Postives = 152/365 (41.64%), Query Frame = 1
Query:   91 RHSGSANPVPDVLHSSQDIRDESVGHGSVH--ESVLSRTGKRNQTDKKVELGQEGEDA--EATSAKHLRLGRFLRQACEVMETLCEENIGSWTGGRRGEGVSEDEGNEGAPSAFRVGVGNAWRELGVEAET---GQGLQRL------IGGASVAAVAFSRTKRSMLVTAHTRLGREEGVL-EGCDVVCVWNSQDSGTLPAKVLIGEGSITSIGLGLTQPHLVMSGTREGNVILWDLREPALASWSEGHTLGLSCGIRAVTYSTSFMASNTSATAGRVLRDESTFLLPSSHGHSSAVMSVVPIPSHGVGGGVGEGGGVLGGA------LSLSKEVG-TFQVASLDDRGVVCLWVVSELGHIEEGGS 1122
            R+ G+AN     +  ++D  D  +    V   E       +RN+      L QE +D    A +    RL  FLR A +VM  L E++                        A R    N+ R+L   A+T     G  +L      + G  ++ V FS+ +R  +++ H R+ +    L + C V+C+WN  +  + P K+L+ E  +        +  LV +GT  G+V+LWDLRE A   +S     G     R  T+ST  + + +                    GHSS V SV  +PS            V+GG       LS     G +FQ+ASLD+ GV+  WVV EL   +E GS
Sbjct:  569 RNFGTANTKQAYVQCNEDNADRDIQTEEVETCEKWTQHPPERNRACGDPNLSQEVQDTARNAINFDSKRLTSFLRSASQVMVVLLEDD-----------------------RAER----NSLRKLKTHADTLSFSDGSLQLNTTLPFLHGRHISLVHFSQVQRHTMMSVHMRMSKAGATLFDSCTVICIWNIWEP-SRPQKILVYESEVQCCCFSPGKATLVFAGTSVGSVVLWDLREHASDHYSS-IIEGEEWNFRQPTFSTDAVLACS--------------------GHSSCVTSVEVLPSS-----------VIGGQRLEVPLLSSEDSSGLSFQLASLDENGVLNFWVVVELSKGDEAGS 873          
BLAST of mRNA_C-tenellus_contig10509.1.1 vs. uniprot
Match: A0A7J6B4Q0_AMEME (Uncharacterized protein n=5 Tax=Ictaluridae TaxID=7996 RepID=A0A7J6B4Q0_AMEME)

HSP 1 Score: 84.0 bits (206), Expect = 8.360e-14
Identity = 85/305 (27.87%), Postives = 133/305 (43.61%), Query Frame = 1
Query:  220 DKKVELGQEGEDAEATSAKHLRLGRFLRQACEVMETLCEENIGSWTGGRRGEGVSEDEGNEGAPSAFRVGVGNAWRELGVEAETGQGLQRLIGGASVAAVAFSRTKRSMLVTAHT-RLGREEGVLEGCDVVCVWNSQDSGTLPAKVLIGEGSITSIGLGLTQPHLVMSGTREGNVILWDLREPALASWSEGHTLGLSCGIRAVTYSTSFMASNTSATAGRVLRDESTFLLPSSHGHSSAVMSVVPIPSHGVGGGVGEGGGVLGGALSLSKE-VG-TFQVASLDDRGVVCLWVVSELGHIEEGGSQ 1125
            D ++     GE     S    RL  FL  A +VM  L EENI      ++ +  +          +F  G  +   +L             + G  V  + FS+++   L++ H+ R G  +  L+   ++CVWN  +  T P ++L+ E  + S      +  LV +GT  G+V++WDLRE +  S S          +R  T+ST  + S                      GH SAV+SV P+        V  G G+    LS  +E +G +FQ+ SLD+ G++ LWVV EL   ++ GSQ
Sbjct:  549 DPQISHNASGESVTRMSVDSKRLAAFLSSATQVMAVLLEENIAESNSVKKLQSHTHTY-------SFSEGCVHLNTQL-----------NFLQGREVTLLHFSQSQTHTLLSLHSPRSGSSDVTLDSKTLMCVWNIWEPST-PQRILVCEAEVRSCCFSPGKAALVFAGTDVGSVLVWDLREHS-GSHSHVRVCEEEWTLRQPTFSTDAVLSGA--------------------GHFSAVVSVEPVL-------VNVGAGLRDPLLSDQEESLGLSFQLGSLDENGLLNLWVVVELPKADDSGSQ 806          
BLAST of mRNA_C-tenellus_contig10509.1.1 vs. uniprot
Match: UPI001F07461B (cytoplasmic dynein 2 intermediate chain 1 isoform X1 n=3 Tax=Hypomesus transpacificus TaxID=137520 RepID=UPI001F07461B)

HSP 1 Score: 82.8 bits (203), Expect = 2.020e-13
Identity = 87/311 (27.97%), Postives = 141/311 (45.34%), Query Frame = 1
Query:  250 EDAEATSAKHL---RLGRFLRQACEVMETLCEENIGSWTGGRRGEGVSEDEGNEGAPSAFRVGVGNAWRELGVEAETGQGLQ--------RL--IGGASVAAVAFSRTKRSMLVTAHTRLGREEGV-LEGCDVVCVWNSQDSGTLPAKVLIGEGSITSIGLGLTQPHLVMSGTREGNVILWDLREPALASWSEGHTL---GLSCGIRAVTYSTSFMASNTSATAGRVLRDESTFLLPSSHGHSSAVMSVVPIPSHGVGGGVGEGGGVLGGALSLSKEVG--TFQVASLDDRGVVCLWVVSELGHIEEGGSQ 1125
            ED+++T+  ++   RL  FLR A +V+  L EE+                        A R  +    ++L  +A+T Q           RL  + G  ++ V FS+ +   +++ H+ + +   V L+   ++C+WN  +  + P K+L+ E  + S      +  LV +GT  G+V+LWDLRE A     + HTL    +   +R  T+ST  + +                    + GH S+V SV  +P+      V +GGG     L   +E    +FQ+ASLD+ GV+ LWVV EL    E GSQ
Sbjct:  591 EDSQSTTKMNVDSQRLATFLRSASQVVAVLLEED-----------------------RAERQSL----KKLRSQADTLQSFSDGCLQLNTRLPFLHGRPISLVHFSQVQTQTVLSVHSPIQKPSAVRLDSKTIICIWNIWEP-SRPQKILVYESEVRSCCFSPGKATLVFAGTSVGSVVLWDLREHA----GDHHTLRIGDIDWTLRQPTFSTDAVLA--------------------ASGHMSSVSSVEVVPAA-----VSQGGGPELPLLGSDEESSGLSFQLASLDENGVLNLWVVLELPKTNEAGSQ 844          
BLAST of mRNA_C-tenellus_contig10509.1.1 vs. uniprot
Match: UPI0014039BAB (WD repeat-containing protein 60 isoform X1 n=2 Tax=Petromyzon marinus TaxID=7757 RepID=UPI0014039BAB)

HSP 1 Score: 81.6 bits (200), Expect = 4.940e-13
Identity = 84/289 (29.07%), Postives = 133/289 (46.02%), Query Frame = 1
Query:  283 RLGRFLRQACEVMETLCEENIGSWTGGRRGEGVSEDEGNEGAPS-AFRVGVGNAWRELGVEAETGQGLQRLIGGASVAAVAFSRTKRSMLVTAH----TRLGREEGVLEGCDVVCVWNSQDSGTLPAKVLIGEGSITSIGLGLTQPHLVMSGTREGNVILWDLREPAL---ASWSEGHTLGLSCGIRAVTYSTSFMASNTSATAGRVLRDESTFLLPSSHGHSSAVMSVVPIPSHGVGGGVGEGGGVLGGALSLSKEVG-TFQVASLDDRGVVCLWVVSELGHIEEGGS 1122
            RL RFL  A +V+  L EE    WT         E E +    +    + VG+++  L  +          + G +V+ +  S  +R ML++ H    +RL + + VL  C V+CVW+ +   + P +VL+ E  ++    GL +  L+ +GT EG ++LWD REP     A   +G  +     +R  TYST   AS T                    GHS+ V +V P+P+            V   A S ++  G ++Q+ASL++ GV+ LWVV E+   +  GS
Sbjct:  684 RLQRFLASAFQVVSVLLEEE---WT---------EKEASRNLETRTSSLSVGSSFYPLHTDLP-------FLHGRTVSRLHVSEVQRHMLLSVHPPGPSRL-QVDAVLARCVVLCVWDLRQP-SQPQRVLLSEPEVSCCCFGLDRAGLLFAGTEEGGLLLWDPREPPALHRALRDDGEHVW---PLRLPTYSTVGAASGT--------------------GHSTPVRAVEPVPTP----------SVHPSARSSTERSGLSYQLASLEEGGVMNLWVVLEMPTADAAGS 918          
BLAST of mRNA_C-tenellus_contig10509.1.1 vs. uniprot
Match: UPI001EEB3CCC (LOW QUALITY PROTEIN: cytoplasmic dynein 2 intermediate chain 1 n=1 Tax=Silurus meridionalis TaxID=175797 RepID=UPI001EEB3CCC)

HSP 1 Score: 81.3 bits (199), Expect = 5.700e-13
Identity = 85/294 (28.91%), Postives = 131/294 (44.56%), Query Frame = 1
Query:  265 TSAKHLRLGRFLRQACEVMETLCEENIGSWTGGRRGEGVSEDEGNEGAPSAFRVGVGNAWRELGVEAETGQGLQRLIGGASVAAVAFSRTKRSMLVTAHT-RLGREEGVLEGCDVVCVWNSQDSGTLPAKVLIGEGSITSIGLGLTQPHLVMSGTREGNVILWDLREPALASWS-----EGHTLGLSCGIRAVTYSTSFMASNTSATAGRVLRDESTFLLPSSHGHSSAVMSVVPIPSHGVGGGVGEGGGVLGGALSLSKE-VGTFQVASLDDRGVVCLWVVSELGHIEEGGSQ 1125
            T+    RL RFL  + +VM  L EEN+      ++ +  +          +F  G         V+  T       + G  V  + FS+T+   L++ H+   G     L+   ++CVWN  +  T P ++LI E  + S      +  LV +GT  G+V+LWDLREP+ +  S     E  TL      R  T+ST  + S T                    GH SAV+SV P+ ++        G G+    L   +E + +FQ+ SLD+ G++ LWVV EL   ++ GSQ
Sbjct:  312 TTLDSKRLTRFLHSSTQVMAVLLEENMAENNSVKKLQSQTHTH-------SFSDGC--------VQLNTSLSF---LQGRQVTLLHFSQTQPHTLLSVHSPHSGSGHVTLDRTTLICVWNIWEPST-PQRLLIYETEVRSCCFSPGKAVLVFAGTDVGSVVLWDLREPSSSHLSIRVCEEEWTL------RYPTFSTDAVLSGT--------------------GHFSAVISVEPVLAN-------LGAGLRDPLLPDQEESMRSFQLGSLDENGLLHLWVVVELPRADDSGSQ 553          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10509.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXE1_ECTSI1.600e-5336.29WD repeat-containing protein 60 n=2 Tax=Ectocarpus... [more]
A0A7S3XQJ7_HETAK2.290e-1927.16Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
UPI00147E47395.090e-1529.15WD repeat-containing protein 60 n=1 Tax=Pangasiano... [more]
A0A5N5PH66_PANHP6.090e-1529.15Uncharacterized protein n=1 Tax=Pangasianodon hypo... [more]
A0A835Z6D0_9STRA3.440e-1426.76Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A8C5HJQ1_9TELE6.380e-1427.67WD repeat domain 60 n=6 Tax=Gouania willdenowi Tax... [more]
A0A7J6B4Q0_AMEME8.360e-1427.87Uncharacterized protein n=5 Tax=Ictaluridae TaxID=... [more]
UPI001F07461B2.020e-1327.97cytoplasmic dynein 2 intermediate chain 1 isoform ... [more]
UPI0014039BAB4.940e-1329.07WD repeat-containing protein 60 isoform X1 n=2 Tax... [more]
UPI001EEB3CCC5.700e-1328.91LOW QUALITY PROTEIN: cytoplasmic dynein 2 intermed... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig10509contigC-tenellus_contig10509:1283..5198 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FXE1
PFAMsWD40
Model size1125
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons4
Evalue2.63e-54
EggNOG OGsKOG1587@1|root,KOG1587@2759|Eukaryota
Descriptiondynein heavy chain binding
Cds size1125
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789135.4054458-CDS-C-tenellus_contig10509:1282..19181680789135.4054458-CDS-C-tenellus_contig10509:1282..1918Choristocarpus tenellus KU2346CDSC-tenellus_contig10509 1283..1918 +
1680789135.4170477-CDS-C-tenellus_contig10509:2396..25461680789135.4170477-CDS-C-tenellus_contig10509:2396..2546Choristocarpus tenellus KU2346CDSC-tenellus_contig10509 2397..2546 +
1680789135.4341202-CDS-C-tenellus_contig10509:3529..37871680789135.4341202-CDS-C-tenellus_contig10509:3529..3787Choristocarpus tenellus KU2346CDSC-tenellus_contig10509 3530..3787 +
1680789135.449181-CDS-C-tenellus_contig10509:5117..51981680789135.449181-CDS-C-tenellus_contig10509:5117..5198Choristocarpus tenellus KU2346CDSC-tenellus_contig10509 5118..5198 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig10509.1.1prot_C-tenellus_contig10509.1.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig10509 1283..5198 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig10509.1.1

>prot_C-tenellus_contig10509.1.1 ID=prot_C-tenellus_contig10509.1.1|Name=mRNA_C-tenellus_contig10509.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=375bp
KVPQLDQEVQFHLGHDDTDLENLMAHIRSTRHSGSANPVPDVLHSSQDIR
DESVGHGSVHESVLSRTGKRNQTDKKVELGQEGEDAEATSAKHLRLGRFL
RQACEVMETLCEENIGSWTGGRRGEGVSEDEGNEGAPSAFRVGVGNAWRE
LGVEAETGQGLQRLIGGASVAAVAFSRTKRSMLVTAHTRLGREEGVLEGC
DVVCVWNSQDSGTLPAKVLIGEGSITSIGLGLTQPHLVMSGTREGNVILW
DLREPALASWSEGHTLGLSCGIRAVTYSTSFMASNTSATAGRVLRDESTF
LLPSSHGHSSAVMSVVPIPSHGVGGGVGEGGGVLGGALSLSKEVGTFQVA
SLDDRGVVCLWVVSELGHIEEGGSQ
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mRNA from alignment at C-tenellus_contig10509:1283..5198+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig10509.1.1 ID=mRNA_C-tenellus_contig10509.1.1|Name=mRNA_C-tenellus_contig10509.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3916bp|location=Sequence derived from alignment at C-tenellus_contig10509:1283..5198+ (Choristocarpus tenellus KU2346)
AAGGTACCCCAACTGGACCAGGAGGTTCAATTTCACCTGGGTCATGATGA CACAGACCTGGAAAACCTCATGGCACACATTCGTTCCACCCGCCATAGTG GTTCTGCCAACCCTGTACCTGACGTGCTGCACTCCTCCCAAGACATACGG GATGAGAGTGTGGGCCATGGGAGTGTCCATGAGTCTGTACTAAGCAGGAC AGGAAAACGGAATCAAACAGACAAAAAAGTAGAACTGGGTCAGGAAGGTG AAGACGCAGAGGCAACAAGCGCAAAGCACTTACGATTAGGTAGATTTCTC CGCCAGGCCTGCGAGGTCATGGAAACCTTGTGTGAGGAAAATATTGGCTC TTGGACCGGGGGGAGGAGAGGAGAGGGGGTTAGTGAGGATGAGGGCAATG AGGGAGCCCCTTCCGCATTTCGTGTTGGGGTGGGTAATGCATGGAGGGAG CTTGGGGTAGAGGCTGAAACAGGGCAAGGGCTGCAACGGCTAATTGGAGG GGCTTCTGTAGCTGCAGTAGCATTTAGCCGTACAAAGCGTTCAATGTTGG TAACTGCACACACACGACTAGGGAGAGAGGAGGGAGTGCTGGAAGGCTGC GATGTGGTGTGTGTATGGAATAGCCAAGACAGTGGGGTGAGTGAGGAACA CCAACATTCTTGCATGGTCCTATCCCTGAATTCATAATTTATCCCATTGA TTGATATGCTGTTACCGTGCAAATTGTCTGTTGTCTTATCTCTGTATAAT GCTAAGTTATTAAGGGAATGAAAGACTCAATGCATCACTTTAAGGCCTTG TACTGTGATGTACTGCAAAATACCCAGAATAGCTTAGATTTTGAAAACCC CCACATCTTTGTTCTATATTTACTGAAAGAGTATGTATATGGAGGACGAC ACCAATCAATGAATATGAGTGCGTGAGCACGGTTTATTTCAATCCTGCCA TAATGTTTCTACCAGCATTACAAGCATAGATAGGTACTATAGGCATTGTG AGTGTATTGTGAGTGTATTGTGAGTGTATTGTGAGTCAACACTACACTCC CACTCTACTGGCCTCTTACCTTGCTCAACCGACCTGTTAATGAAAACGAC CTCCTGTGGTCTAGACTTTACCTGCAAAGGTCCTAATTGGGGAGGGATCC ATCACATCTATAGGGCTTGGCCTTACACAACCTCACCTTGTCATGTCTGG GACCAGAGAGGGAAATGTTATACTCTGGGACTTGAGGGAACCTGCACTAG CCAGCTGGTCAGAGGTGAGGCATTGGCACAAATCATGTATGGGTGAGGTA CATATTTCCTGACGTAATGACTCTCAATGGGAGACCAGAGTAGCAGTGAA GTGGTTAAATTGTAGAGTGATAAACAGGATGTAGTGAGCACAACTGTCTG TCCCAGTGGTACAGTGCCATCTCAATATCATTTGGTAATAATGGCGACTG GTGCCTACCCAGCTTAATCTGCAGGGTAGCACCCCACTAGTCGTGTGAAT GACGTAACAAAGGTACACCAATATTTGACAAAATGAGTTGTCGAGGGTTG TGGGTTCAAGAATCAGCTTGACTACTTTTTCCAACTTCCTGTAGAGGGAG AATGAAATGTAGAATGCAAGGGGAGGGTGCAGGTAATGTGTTCAATGGGA AATACAAAGGTTGGGACGACTGCCAAGGAAGAGCACATGGCTAGTGGGGT GATGGTTCACGGATTATGCCAGATAAGACCCTAGTCTCTGATTTTATCAT ATATTGAGATACCTCCTTATTAATGACGAAGATAATTGTGCCACATACTG CCCTGGTGGTACAATGGTATCTCAATATTTGTGAGGGATGATGGTGTGTA GTTAAGACTTGGGCATCTTCTTGTATTTTCATCAGTTATCATCACATTTG CTTGGTCTTGGTATGGCATATGACATCGGCATGCAAGACCCACCCTCATT GACACCCCCCTTCAAACCCCTCCTTCATAGGTTGGAAATACCTCCATCAG ACTTGGGAGATTTTGAGTACAGAATAATTAGTAAGTCAATGAAGTAATAA AATCTCAACATACCTGCCGATCTTGACCATAATACTATGCTTCCCTACTC TACTCTACATACTGTCTTGATGCAGGTCTTACGCTATACTTAGAGTATGC CTTCATTCTGATGCCTTATGTGATATGTGAAATATCTTACGCCCCATACC TTATTATATCCTAATATGTCATATGCCTTATGTGTGTATGTTGTCAGGGT CATACTCTTGGACTGAGTTGTGGGATACGTGCAGTGACCTACTCAACATC GTTCATGGCATCAAACACATCAGCAACAGCTGGGCGAGTTCTGAGGGACG AGAGCACCTTCTTACTACCTTCTAGCCATGGACACTCCTCAGCTGTGATG TCAGTGGTGCCCATACCTAGCCATGGAGTTGGTGGGGGGGTAGGTGAGGG GGGTGGGGTGCTTGGGGGGGCGCTGTCCCTCTCCAAGGAGGTTGGCACCT TTCAGGTAAGAGTTGAGGAAGGACTGTGATCTGGTTATTGATAGTATATT CTGTATTGATGGATGGAAACGATTCTTCACTCTATCGTGTCGATAGTTGT CATGTCGTATCTGACTACTGCAATTGTGTTTGGAGGGTGGTGATAGCATC ACCCCAATTGTTTGAGCTCTTTCCACTTCTTATTCTTGCACAAGGCATGT GGCACAGGTATGCACCTTCGAAATGTACTGTTTGAGGAGCACCTGCCACA GTAAACTCATCAAAAGAACAGTCAAGAACAATATATTGCAAAAAAATGGA TGCAGTTCAACCAACATTGTGTACCCTGTGATCTAATCCCTTGTAGCTAT GGTGGGAGTATGTGGTGAAATATACCAGGCACATCAAAAATCCACGAGCT CCCTCGACCCAGCTCATACTCATGTTGTGTTATTTGGTGCTCCTCCCACA GCTATAAAATACAGCAAAACACTCCAACATTTTTTTTAACATGTGTGGAT GCACAACACAGCCTGTCACCTTTATTGCTGCATTTTGATACTTTAAAGGA TGGTTTGTCATTGGTATAGCTTATAGTTCAAAGAACAACAAAGCACAGTA CTATTTTTTTCCACTTTTGATGTGAAAAAAATCAAGTACAGTATTACAAA AAAGAGATGTGTTCCTGTTTCTCTCAAAATAAAACCATAATGGAGTAGCT TATATTAAATCGTATGACACAGGGAATTAAATCTCCAAACTAATACCTAC CTCCTGCTTTTAGAAGTCATTTCTTTGTCCTTGACTACCAATTTCCAAGT GCCAAACAAGTATTGTATGCTATGAGCAAGCAAAGAAGTCATTGAGTTGG GTAACCGCAATTGTATTGAACATAAATTGGGATATTGGTATCAGAACTCA TATGCAAACAACAATGGAACCCTACCCATCATACCCCTCCTCCAATAATT CTTCACCACCACTGTCACTATCACCACTACCATGCGACCTGCAAAAAGAA TTGGGGACAATAATTTATATCTCACTAAAAAAAATCAAGAAGACAAAGGC AATTTGTTTCCACCATAAACCCTGACATGACATCATCGAAGACCTTCAGC CAATGATTGTGTACAGGATGGATACTTCCAAGTACTTTGGAATATTCTCC TAAATCGATATTATTCTTAGGGACTGTTGTCCCTTACAACCCAAACAATC ACAATATTCCGCCAATTTATTTTTCTGTTGCTGGGATCACATGTTTGTGA CCCTCCCTATTCTTCTTCATTCTCCTTGTTTCGATTTTGCGATAATGTAT TTTGATCCTGTGTTTTGATTGTGTGTTGATGATAGGTGGCATCTTTGGAT GATCGGGGTGTGGTGTGTTTGTGGGTGGTTTCTGAGCTTGGCCACATAGA GGAGGGGGGTTCCCAG
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Coding sequence (CDS) from alignment at C-tenellus_contig10509:1283..5198+

>mRNA_C-tenellus_contig10509.1.1 ID=mRNA_C-tenellus_contig10509.1.1|Name=mRNA_C-tenellus_contig10509.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=1125bp|location=Sequence derived from alignment at C-tenellus_contig10509:1283..5198+ (Choristocarpus tenellus KU2346)
AAGGTACCCCAACTGGACCAGGAGGTTCAATTTCACCTGGGTCATGATGA
CACAGACCTGGAAAACCTCATGGCACACATTCGTTCCACCCGCCATAGTG
GTTCTGCCAACCCTGTACCTGACGTGCTGCACTCCTCCCAAGACATACGG
GATGAGAGTGTGGGCCATGGGAGTGTCCATGAGTCTGTACTAAGCAGGAC
AGGAAAACGGAATCAAACAGACAAAAAAGTAGAACTGGGTCAGGAAGGTG
AAGACGCAGAGGCAACAAGCGCAAAGCACTTACGATTAGGTAGATTTCTC
CGCCAGGCCTGCGAGGTCATGGAAACCTTGTGTGAGGAAAATATTGGCTC
TTGGACCGGGGGGAGGAGAGGAGAGGGGGTTAGTGAGGATGAGGGCAATG
AGGGAGCCCCTTCCGCATTTCGTGTTGGGGTGGGTAATGCATGGAGGGAG
CTTGGGGTAGAGGCTGAAACAGGGCAAGGGCTGCAACGGCTAATTGGAGG
GGCTTCTGTAGCTGCAGTAGCATTTAGCCGTACAAAGCGTTCAATGTTGG
TAACTGCACACACACGACTAGGGAGAGAGGAGGGAGTGCTGGAAGGCTGC
GATGTGGTGTGTGTATGGAATAGCCAAGACAGTGGGACTTTACCTGCAAA
GGTCCTAATTGGGGAGGGATCCATCACATCTATAGGGCTTGGCCTTACAC
AACCTCACCTTGTCATGTCTGGGACCAGAGAGGGAAATGTTATACTCTGG
GACTTGAGGGAACCTGCACTAGCCAGCTGGTCAGAGGGTCATACTCTTGG
ACTGAGTTGTGGGATACGTGCAGTGACCTACTCAACATCGTTCATGGCAT
CAAACACATCAGCAACAGCTGGGCGAGTTCTGAGGGACGAGAGCACCTTC
TTACTACCTTCTAGCCATGGACACTCCTCAGCTGTGATGTCAGTGGTGCC
CATACCTAGCCATGGAGTTGGTGGGGGGGTAGGTGAGGGGGGTGGGGTGC
TTGGGGGGGCGCTGTCCCTCTCCAAGGAGGTTGGCACCTTTCAGGTGGCA
TCTTTGGATGATCGGGGTGTGGTGTGTTTGTGGGTGGTTTCTGAGCTTGG
CCACATAGAGGAGGGGGGTTCCCAG
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