mRNA_C-tenellus_contig10508.2.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10508.2.1 vs. uniprot
Match: D8LT21_ECTSI (Polyketide_cyc domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LT21_ECTSI) HSP 1 Score: 150 bits (379), Expect = 3.040e-42 Identity = 73/116 (62.93%), Postives = 84/116 (72.41%), Query Frame = 1 Query: 1 SVAALCMFYC---AFGKDAKGPHPHNGMVKPYQPGPPSFTLTKRQLSDLEEGKLVEDMLKGKNSEDGGKAGRALAVQDVDAPPEYVWDRIKDFNNYKNMVPKVVECYNYDTETLRN 339 ++ A CM + A G A HPH G VKPY+PG P LTK+Q +DL+ G LV+DMLKG+ EDGGK GRALAVQDV+AP EYVWDRI DF NY MVPKV EC NY+TETLRN Sbjct: 25 TMGAACMLFLPGVAQGSAAAEAHPHQGKVKPYKPGMPDIVLTKKQRTDLDGGDLVQDMLKGETDEDGGKGGRALAVQDVNAPAEYVWDRILDFGNYNKMVPKVTECKNYETETLRN 140
BLAST of mRNA_C-tenellus_contig10508.2.1 vs. uniprot
Match: A0A835Z7Q3_9STRA (Polyketide_cyc domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7Q3_9STRA) HSP 1 Score: 113 bits (283), Expect = 3.430e-28 Identity = 54/95 (56.84%), Postives = 63/95 (66.32%), Query Frame = 1 Query: 55 PHPHNGMVKPYQPGPPSFTLTKRQLSDLEEGKLVEDMLKGKNSEDGGKAGRALAVQDVDAPPEYVWDRIKDFNNYKNMVPKVVECYNYDTETLRN 339 PHPH G+ PY PG P L + + L +GKLV+ K GG AGRALAVQD+ APP+YVWDRI DF NY MVPKVV+C NY+ ET RN Sbjct: 22 PHPHQGLSDPYPPGKPETELASKDIQLLRDGKLVQQSFKK-----GGGAGRALAVQDLHAPPDYVWDRILDFGNYPKMVPKVVKCNNYEVETFRN 111
BLAST of mRNA_C-tenellus_contig10508.2.1 vs. uniprot
Match: B8C054_THAPS (Polyketide_cyc domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C054_THAPS) HSP 1 Score: 90.5 bits (223), Expect = 2.830e-19 Identity = 46/106 (43.40%), Postives = 61/106 (57.55%), Query Frame = 1 Query: 1 SVAALCMFYCAFGKDAKGPHPHNGMVKPYQPGPPSFTLTKRQLSDLEEGKLVEDMLKGKNSEDGGKAGRALAVQDVDAPPEYVWDRIKDFNNYKNMVPKVVECYNY 318 ++A LC Y A + PH H G V+P+QPG P L + +S L+ GK + ++ G GR L VQDVDAP VW+RI D++NY NMVPK +E NY Sbjct: 13 TIALLCTPY-ANASNFNKPHSHTGKVEPFQPGDPKIKLDSKAMSILKAGKPYQTQVQS-----GSAGGRGLVVQDVDAPTSIVWERILDYDNYSNMVPKTIESKNY 112
BLAST of mRNA_C-tenellus_contig10508.2.1 vs. uniprot
Match: A0A4D9DD14_9STRA (Polyketide_cyc domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DD14_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 4.360e-19 Identity = 42/85 (49.41%), Postives = 53/85 (62.35%), Query Frame = 1 Query: 64 HNGMVKPYQPGPPSFTLTKRQLSDLEEGKLVEDMLKGKNSEDGGKAGRALAVQDVDAPPEYVWDRIKDFNNYKNMVPKVVECYNY 318 HNG+VKP++PGPPS L K ++ L +G+ V+ L G GR L +QDV+APPE VW RI DF Y MVP+V C NY Sbjct: 37 HNGLVKPFKPGPPSIRLKKTEVEKLRKGEAVKQQLSS------GSGGRGLVIQDVEAPPEVVWGRIMDFPAYTRMVPRVSLCENY 115
BLAST of mRNA_C-tenellus_contig10508.2.1 vs. uniprot
Match: A0A7R9WQF3_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WQF3_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 5.190e-17 Identity = 45/102 (44.12%), Postives = 57/102 (55.88%), Query Frame = 1 Query: 40 KDAKGPHPHNGMVKPYQPGPPSFTLTKRQLSDLEEGKLVEDMLKGKNSEDGGKAGRALAVQDVDAPPEYVWDRIKDFNNYKNMVPKVVECYNYDTETLRNVS 345 KD PHPH G++KPYQPGP L +L+ GK V +K + G G A+ VQDVDAP E VW +I D++ YK V KV E NY + R+ S Sbjct: 32 KDRHAPHPHQGLLKPYQPGPFDLKLDSSDEKNLQAGKAV---MKQSMPKPGDLGGGAICVQDVDAPREAVWSQILDYDKYKGKVAKVNEAKNYFVKQNRDGS 130
BLAST of mRNA_C-tenellus_contig10508.2.1 vs. uniprot
Match: A0A2D7HYI8_9DELT (Polyketide_cyc domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2D7HYI8_9DELT) HSP 1 Score: 78.2 bits (191), Expect = 2.580e-15 Identity = 43/105 (40.95%), Postives = 61/105 (58.10%), Query Frame = 1 Query: 4 VAALCMFYCAFGKDAKGPHPHNGMVKPYQPGPPSFTLTKRQLSDLEEGKLVEDMLKGKNSEDGGKAGRALAVQDVDAPPEYVWDRIKDFNNYKNMVPKVVECYNY 318 V L + A D + PHPH G+V P++ PP TL++++ S L G+ V ML+ E+ G GR AV+DV APP+ VW+RI F+ Y MVP++ E Y Sbjct: 17 VGLLLVSMAAQAADPEQPHPHQGIVPPFEGAPPRVTLSEKEESRLARGEAVLTMLE----EESG--GRGTAVRDVKAPPKVVWERIGAFDEYSQMVPRMSEAEVY 115
BLAST of mRNA_C-tenellus_contig10508.2.1 vs. uniprot
Match: K0SW72_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SW72_THAOC) HSP 1 Score: 78.6 bits (192), Expect = 1.270e-14 Identity = 39/88 (44.32%), Postives = 50/88 (56.82%), Query Frame = 1 Query: 55 PHPHNGMVKPYQPGPPSFTLTKRQLSDLEEGKLVEDMLKGKNSEDGGKAGRALAVQDVDAPPEYVWDRIKDFNNYKNMVPKVVECYNY 318 PH H G + P+QPG P L + + L GK + ++ + G GR L VQDVDAP VW+RI D++NY NMVPK E NY Sbjct: 201 PHAHKGKLVPFQPGDPKVKLDGKAKNILRSGKPYQTQVQTSD----GAGGRGLVVQDVDAPTSIVWERILDYDNYANMVPKTAESKNY 284
BLAST of mRNA_C-tenellus_contig10508.2.1 vs. uniprot
Match: A0A7S0I6R2_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0I6R2_9EUKA) HSP 1 Score: 75.1 bits (183), Expect = 1.370e-13 Identity = 44/99 (44.44%), Postives = 53/99 (53.54%), Query Frame = 1 Query: 43 DAKGPHPHNGMVKPYQPGPPSFTLTKRQLSDLEEGKLVEDMLKGKNSEDGGKAGRALAVQDVDAPPEYVWDRIKDFNNYKNMVPKVVECYNYDTETLRN 339 DA PH + G+ P+ P +LT + + L G+ V + N GK GRALAVQDV A PE VW+RI F Y MV V EC YDT T RN Sbjct: 39 DASKPHMNGGVNPPFASAKPQVSLTGSEETALAAGRAVTRQVANAN----GKGGRALAVQDVAASPETVWNRILAFPEYPKMVTGVQECSVYDTSTHRN 133
BLAST of mRNA_C-tenellus_contig10508.2.1 vs. uniprot
Match: A0A7S1ULP3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1ULP3_9STRA) HSP 1 Score: 72.8 bits (177), Expect = 4.880e-13 Identity = 38/89 (42.70%), Postives = 56/89 (62.92%), Query Frame = 1 Query: 55 PHPHNGMVKPYQPGP-PSFTLTKRQLSDLEEGKLVEDMLKGKNSEDGGKAGRALAVQDVDAPPEYVWDRIKDFNNYKNMVPKVVECYNY 318 PHPH G++KP++PGP S +L + + L +G V M + + S+ G G A+ VQDV AP + VW++I ++YK V KV+EC NY Sbjct: 105 PHPHQGLLKPHEPGPFASLSLKAKDEATLAKGNSV--MKQDEISKKGSDGGGAICVQDVQAPTDAVWNQILRMDDYKGKVGKVLECKNY 191
BLAST of mRNA_C-tenellus_contig10508.2.1 vs. uniprot
Match: A0A7S3QJ75_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QJ75_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 8.690e-13 Identity = 35/90 (38.89%), Postives = 49/90 (54.44%), Query Frame = 1 Query: 58 HPHNGMVKPYQPGPPSFTLTKRQLSDLEEGKLVEDMLKGKNSEDGGKAGRALAVQDVDAPPEYVWDRIKDFNNYKNMVPKVVECYNYDTE 327 H HNG++ PY PG + + + L +G V L N +G G+A+ VQD+DAP + VW +I D ++Y V KV EC NY E Sbjct: 36 HTHNGLLTPYSPGAFNMKMESKDEEILGKGNSVMKNLPADNDPEGKLGGKAICVQDIDAPKKAVWRQILDMDSYVGKVSKVKECNNYSVE 125 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10508.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10508.2.1 >prot_C-tenellus_contig10508.2.1 ID=prot_C-tenellus_contig10508.2.1|Name=mRNA_C-tenellus_contig10508.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=111bp MFYCAFGKDAKGPHPHNGMVKPYQPGPPSFTLTKRQLSDLEEGKLVEDMLback to top mRNA from alignment at C-tenellus_contig10508:4182..5470+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10508.2.1 ID=mRNA_C-tenellus_contig10508.2.1|Name=mRNA_C-tenellus_contig10508.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1289bp|location=Sequence derived from alignment at C-tenellus_contig10508:4182..5470+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10508:4182..5470+ >mRNA_C-tenellus_contig10508.2.1 ID=mRNA_C-tenellus_contig10508.2.1|Name=mRNA_C-tenellus_contig10508.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=333bp|location=Sequence derived from alignment at C-tenellus_contig10508:4182..5470+ (Choristocarpus tenellus KU2346)back to top |