mRNA_C-tenellus_contig10496.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10496.1.1 vs. uniprot
Match: A0A2N9J8U9_FAGSY (Integrase catalytic domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9J8U9_FAGSY) HSP 1 Score: 62.8 bits (151), Expect = 1.280e-8 Identity = 50/173 (28.90%), Postives = 76/173 (43.93%), Query Frame = 1 Query: 7 EEWILDSAASCHVTNMITHMTNYKPCIGHERVVTASQNSFC-IAGHGDLIILFPSRDNKEVEILLQNVAHVPNLGFNLFSCQAAADKG--------------AKGIFTVSTFSLFDGRATL------------SIGGKQYTMIIRDDYSRFVWLYFLRAKSDAAEAFKKYLVM 444 ++W++DSAAS HVT T+YK G+ V S+ I G GD+ + N + L++V H+P++ NL S +G KG+ ++ SL L S+GG +Y + DD SR VW+Y L+ K + FKK+ M Sbjct: 268 KQWVIDSAASYHVTPRREFFTSYKA--GNLGRVKMGNKSYADIVGIGDICV----ETNTGYTLKLKDVRHIPDMRLNLISVSVLDKEGYESHLGNGGWLTLSEKGLQILAKKSLIPFAKDLVYSDVCGPIEVKSLGGNRYFVTFIDDASRKVWVYVLKTKDQVFQLFKKFHAM 434
BLAST of mRNA_C-tenellus_contig10496.1.1 vs. uniprot
Match: UPI0007381C27 (uncharacterized protein LOC107046418 n=1 Tax=Diachasma alloeum TaxID=454923 RepID=UPI0007381C27) HSP 1 Score: 59.3 bits (142), Expect = 1.620e-7 Identity = 37/113 (32.74%), Postives = 61/113 (53.98%), Query Frame = 1 Query: 7 EEWILDSAASCHVTNMITHMTNYKPCIGHERVVTASQNSFCIAGHGDLIILFPSRDNKE-VEILLQNVAHVPNLGFNLFSCQAAADKGAKGIFTVSTFSLFDGRATLSIGGKQ 342 E+W LDSAAS H++ N +P E+++ + GD+ +L + D +E V +QN+ +VP++ FNLFS +AA DKG + T + S R T++I ++ Sbjct: 235 EDWYLDSAASSHMSPRKEWFVNLEPLNFPEQIMIGDGKVIIRSARGDINVL--AYDGEEWVPKHIQNILYVPDIRFNLFSTEAATDKGLLHVATSTGASFKRNRETVAIRERE 345
BLAST of mRNA_C-tenellus_contig10496.1.1 vs. uniprot
Match: A0A6H5JB16_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB16_9PHAE) HSP 1 Score: 58.9 bits (141), Expect = 2.860e-7 Identity = 24/42 (57.14%), Postives = 34/42 (80.95%), Query Frame = 1 Query: 313 RATLSIGGKQYTMIIRDDYSRFVWLYFLRAKSDAAEAFKKYL 438 +A +S+GGK Y MI++DD++R W+YFLR KSDAA AF+ +L Sbjct: 339 KAVVSVGGKYYPMIVKDDFTRRAWIYFLRNKSDAASAFRSFL 380
BLAST of mRNA_C-tenellus_contig10496.1.1 vs. uniprot
Match: A0A6H5K2M6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2M6_9PHAE) HSP 1 Score: 56.6 bits (135), Expect = 1.730e-6 Identity = 22/38 (57.89%), Postives = 32/38 (84.21%), Query Frame = 1 Query: 325 SIGGKQYTMIIRDDYSRFVWLYFLRAKSDAAEAFKKYL 438 S+GGK Y MI++DD++R W+YFL++KSDAA AF+ +L Sbjct: 645 SVGGKHYPMIVKDDFTRRTWMYFLKSKSDAASAFRSFL 682
BLAST of mRNA_C-tenellus_contig10496.1.1 vs. uniprot
Match: A0A6H5K622_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K622_9PHAE) HSP 1 Score: 56.6 bits (135), Expect = 1.780e-6 Identity = 23/42 (54.76%), Postives = 32/42 (76.19%), Query Frame = 1 Query: 313 RATLSIGGKQYTMIIRDDYSRFVWLYFLRAKSDAAEAFKKYL 438 + SIGGK Y MI++DD++R W+YFLR+KSDA AF+ +L Sbjct: 486 KGVASIGGKHYPMILKDDFTRRAWMYFLRSKSDAGSAFRSFL 527
BLAST of mRNA_C-tenellus_contig10496.1.1 vs. uniprot
Match: A0A6H5JH25_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH25_9PHAE) HSP 1 Score: 56.6 bits (135), Expect = 1.790e-6 Identity = 23/42 (54.76%), Postives = 32/42 (76.19%), Query Frame = 1 Query: 313 RATLSIGGKQYTMIIRDDYSRFVWLYFLRAKSDAAEAFKKYL 438 + SIGGK Y MI++DD++R W+YFLR+KSDA AF+ +L Sbjct: 462 KGVASIGGKHYPMILKDDFTRRAWMYFLRSKSDAGSAFRSFL 503
BLAST of mRNA_C-tenellus_contig10496.1.1 vs. uniprot
Match: A0A6H5J7U9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7U9_9PHAE) HSP 1 Score: 55.5 bits (132), Expect = 2.210e-6 Identity = 24/38 (63.16%), Postives = 34/38 (89.47%), Query Frame = 1 Query: 325 SIGGKQYTMIIRDDYSRFVWLYFLRAKSDAAEAFKKYL 438 S+GGK YT+I++DDY+R+ +YFL+ KSDAAEAF++YL Sbjct: 49 SLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYL 86
BLAST of mRNA_C-tenellus_contig10496.1.1 vs. uniprot
Match: A0A6H5GIV9_9HEMI (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5GIV9_9HEMI) HSP 1 Score: 56.2 bits (134), Expect = 2.230e-6 Identity = 32/90 (35.56%), Postives = 49/90 (54.44%), Query Frame = 1 Query: 13 WILDSAASCHVTNMITHMTNYKPCIGHERVVTASQNSFCIAGHGDLIILFPSRDNKEVEILLQNVAHVPNLGFNLFSCQAAADKGAKGIF 282 W++DSAAS H+T +TN + V+ A+ A GD+ I+F D + E+++ NV++VP+L NL S A KG + IF Sbjct: 83 WLVDSAASGHMTGRKDWLTNSSTANSGQTVLLANGQQLTTAESGDVHIVF---DGNDEEMVISNVSYVPDLNVNLLSVDALVKKGHEVIF 169
BLAST of mRNA_C-tenellus_contig10496.1.1 vs. uniprot
Match: A0A6H5KKV4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKV4_9PHAE) HSP 1 Score: 55.5 bits (132), Expect = 2.570e-6 Identity = 27/44 (61.36%), Postives = 37/44 (84.09%), Query Frame = 1 Query: 310 GRA-TLSIGGKQYTMIIRDDYSRFVWLYFLRAKSDAAEAFKKYL 438 GRA LS+GGK YT+++RDD +R+ +YFL+ KSDAAEAF++YL Sbjct: 34 GRARVLSLGGKWYTLVVRDDCTRWNRVYFLKNKSDAAEAFERYL 77
BLAST of mRNA_C-tenellus_contig10496.1.1 vs. uniprot
Match: A0A6H5JYF9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYF9_9PHAE) HSP 1 Score: 55.5 bits (132), Expect = 3.230e-6 Identity = 24/38 (63.16%), Postives = 34/38 (89.47%), Query Frame = 1 Query: 325 SIGGKQYTMIIRDDYSRFVWLYFLRAKSDAAEAFKKYL 438 S+GGK YT+I++DDY+R+ +YFL+ KSDAAEAF++YL Sbjct: 183 SLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYL 220 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10496.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10496.1.1 >prot_C-tenellus_contig10496.1.1 ID=prot_C-tenellus_contig10496.1.1|Name=mRNA_C-tenellus_contig10496.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=148bp EREEWILDSAASCHVTNMITHMTNYKPCIGHERVVTASQNSFCIAGHGDLback to top mRNA from alignment at C-tenellus_contig10496:4440..5237+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10496.1.1 ID=mRNA_C-tenellus_contig10496.1.1|Name=mRNA_C-tenellus_contig10496.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=798bp|location=Sequence derived from alignment at C-tenellus_contig10496:4440..5237+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10496:4440..5237+ >mRNA_C-tenellus_contig10496.1.1 ID=mRNA_C-tenellus_contig10496.1.1|Name=mRNA_C-tenellus_contig10496.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=444bp|location=Sequence derived from alignment at C-tenellus_contig10496:4440..5237+ (Choristocarpus tenellus KU2346)back to top |