mRNA_C-tenellus_contig10493.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10493.1.1 vs. uniprot
Match: D8LC49_ECTSI (TPR Domain containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC49_ECTSI) HSP 1 Score: 130 bits (327), Expect = 2.990e-33 Identity = 64/106 (60.38%), Postives = 83/106 (78.30%), Query Frame = 1 Query: 1 IKGAFCLLDKAKILTGPGQPYLTRYRLQTRAITLNNLGCLMKRWGKPRVGIRYLSKAISIEARCQD-PDNPAGTHLNMSAALSGIGLHQKAAFHAGAAVDLATEAL 315 IK + LL KA +LT GQP+L + RLQ RA+TLNN GCLMK WGKPR +++L++A+ IEA+ DNPAGTH+NMSAALS IGLH++AA HAG A+DLA++A+ Sbjct: 81 IKASVRLLQKASLLTSRGQPFLGKARLQARALTLNNFGCLMKNWGKPRESVKFLARALRIEAKVPGGADNPAGTHVNMSAALSTIGLHREAAMHAGHAIDLASQAM 186
BLAST of mRNA_C-tenellus_contig10493.1.1 vs. uniprot
Match: A0A7S1H3R9_HEMAN (Hypothetical protein n=6 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1H3R9_HEMAN) HSP 1 Score: 88.2 bits (217), Expect = 3.730e-18 Identity = 52/103 (50.49%), Postives = 65/103 (63.11%), Query Frame = 1 Query: 10 AFCLLDKAKILTGP-GQPYLTRYRLQTRAITLNNLGCLMKRWGKPRVGIRYLSKAISIEARCQDPDNPAGTHLNMSAALSGIGLHQKAAFHAGAAVDLATEAL 315 +F LL KA+I+T P G T RL+ RAITLNNLGC M+R GK ++YL KA+ IE + DNPAGTHLNM A LS + H A HA A+ L +A+ Sbjct: 82 SFELLKKAEIVTEPRGLIRDTMTRLKMRAITLNNLGCFMRRRGKLHSALQYLDKALRIELTVKTVDNPAGTHLNMCAVLSQLNRHAAALQHAQCALQLLEDAV 184
BLAST of mRNA_C-tenellus_contig10493.1.1 vs. uniprot
Match: A0A7S1CBS2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CBS2_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 5.660e-14 Identity = 44/97 (45.36%), Postives = 54/97 (55.67%), Query Frame = 1 Query: 19 LLDKAKILTGPGQPYLTRYRLQTRAITLNNLGCLMKRWGKPRVGIRYLSKAISIEARCQDPDNPAGTHLNMSAALSGIGLHQKAAFHAGAAVDLATE 309 LL KA ILT + RA+T NNL C +R GK + YL KA+ IE+R D +NPA THLNM A LS +G H A HA +A+ L E Sbjct: 86 LLKKADILTERDEA--------GRAVTFNNLACYYRRQGKLHASLSYLQKALRIESRLPDCENPADTHLNMCAVLSQLGRHAAALEHAQSALILLQE 174
BLAST of mRNA_C-tenellus_contig10493.1.1 vs. uniprot
Match: A0A7S3YLC4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YLC4_HETAK) HSP 1 Score: 72.4 bits (176), Expect = 8.020e-13 Identity = 42/99 (42.42%), Postives = 58/99 (58.59%), Query Frame = 1 Query: 19 LLDKAKILTGPGQPYLTRYRLQTRAITLNNLGCLMKRWGKPRVGIRYLSKAISIEARCQDPDNPAGTHLNMSAALSGIGLHQKAAFHAGAAVDLATEAL 315 LL KA+ILT Q + +A+T NNL C +R GK ++YL KA+ IE++ +D +NPA THLN A LS +G H A HA +++ L E L Sbjct: 141 LLKKAEILTERDQ--------KGKAVTYNNLACYYRRQGKLHSALQYLQKALKIESKMKDVENPADTHLNTCAVLSQLGRHTSALEHAQSSMILLQEEL 231
BLAST of mRNA_C-tenellus_contig10493.1.1 vs. uniprot
Match: A0A7S2CPG4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CPG4_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 4.790e-12 Identity = 43/99 (43.43%), Postives = 53/99 (53.54%), Query Frame = 1 Query: 19 LLDKAKILTGPGQPYLTRYRLQTRAITLNNLGCLMKRWGKPRVGIRYLSKAISIEARCQDPDNPAGTHLNMSAALSGIGLHQKAAFHAGAAVDLATEAL 315 LL KA+ILT RA+T NNL C +R GK ++YL KA+ IE + DNPA T+LN A LS +G HQ A HA A+ L E L Sbjct: 85 LLKKAEILTERDNA--------GRAVTFNNLACYYRRQGKLHAALQYLQKALKIENKLDQVDNPADTYLNTCAVLSQLGRHQSALEHAQQALILLQEEL 175
BLAST of mRNA_C-tenellus_contig10493.1.1 vs. uniprot
Match: A0A5A8C0Q3_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C0Q3_CAFRO) HSP 1 Score: 68.9 bits (167), Expect = 2.020e-11 Identity = 41/94 (43.62%), Postives = 54/94 (57.45%), Query Frame = 1 Query: 19 LLDKAKILTGPGQPYLTRYRLQTRAITLNNLGCLMKRWGKPRVGIRYLSKAISIEARCQDPDNPAGTHLNMSAALSGIGLHQKAAFHAGAAVDL 300 LL KA+ILT RA+T NNL C +R G+ +++L KA+SIEAR + NPA THLN+ A LS + H +A HA AA+ L Sbjct: 86 LLKKAEILT--------ERDAAGRAVTYNNLACYYRRVGRLHAALKFLKKALSIEARLERVTNPADTHLNICAVLSQLSRHAEALRHAQAALRL 171
BLAST of mRNA_C-tenellus_contig10493.1.1 vs. uniprot
Match: A0A5A8DKN8_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DKN8_CAFRO) HSP 1 Score: 68.9 bits (167), Expect = 2.100e-11 Identity = 41/94 (43.62%), Postives = 54/94 (57.45%), Query Frame = 1 Query: 19 LLDKAKILTGPGQPYLTRYRLQTRAITLNNLGCLMKRWGKPRVGIRYLSKAISIEARCQDPDNPAGTHLNMSAALSGIGLHQKAAFHAGAAVDL 300 LL KA+ILT RA+T NNL C +R G+ +++L KA+SIEAR + NPA THLN+ A LS + H +A HA AA+ L Sbjct: 86 LLKKAEILT--------ERDAAGRAVTYNNLACYYRRVGRLHAALKFLKKALSIEARLERVTNPADTHLNICAVLSQLSRHAEALRHAQAALRL 171
BLAST of mRNA_C-tenellus_contig10493.1.1 vs. uniprot
Match: A0A5A8DFH3_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DFH3_CAFRO) HSP 1 Score: 68.9 bits (167), Expect = 2.130e-11 Identity = 41/94 (43.62%), Postives = 54/94 (57.45%), Query Frame = 1 Query: 19 LLDKAKILTGPGQPYLTRYRLQTRAITLNNLGCLMKRWGKPRVGIRYLSKAISIEARCQDPDNPAGTHLNMSAALSGIGLHQKAAFHAGAAVDL 300 LL KA+ILT RA+T NNL C +R G+ +++L KA+SIEAR + NPA THLN+ A LS + H +A HA AA+ L Sbjct: 86 LLKKAEILT--------ERDAAGRAVTYNNLACYYRRVGRLHAALKFLKKALSIEARLERVTNPADTHLNICAVLSQLSRHAEALRHAQAALRL 171
BLAST of mRNA_C-tenellus_contig10493.1.1 vs. uniprot
Match: A0A5A8C5F9_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C5F9_CAFRO) HSP 1 Score: 68.9 bits (167), Expect = 2.170e-11 Identity = 41/94 (43.62%), Postives = 54/94 (57.45%), Query Frame = 1 Query: 19 LLDKAKILTGPGQPYLTRYRLQTRAITLNNLGCLMKRWGKPRVGIRYLSKAISIEARCQDPDNPAGTHLNMSAALSGIGLHQKAAFHAGAAVDL 300 LL KA+ILT RA+T NNL C +R G+ +++L KA+SIEAR + NPA THLN+ A LS + H +A HA AA+ L Sbjct: 86 LLKKAEILT--------ERDAAGRAVTYNNLACYYRRVGRLHAALKFLKKALSIEARLERVTNPADTHLNICAVLSQLSRHAEALRHAQAALRL 171
BLAST of mRNA_C-tenellus_contig10493.1.1 vs. uniprot
Match: A0A482SDU3_9ARCH (Tetratricopeptide repeat protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SDU3_9ARCH) HSP 1 Score: 68.2 bits (165), Expect = 2.170e-11 Identity = 42/99 (42.42%), Postives = 54/99 (54.55%), Query Frame = 1 Query: 19 LLDKAKILTGPGQPYLTRYRLQTRAITLNNLGCLMKRWGKPRVGIRYLSKAISIEARCQDPDNPAGTHLNMSAALSGIGLHQKAAFHAGAAVDLATEAL 315 LL KA+ILT RA T NNL C +R GK ++YL KA+ IE++ + NPA TH+N A LS +G HQ A HA +A+ L E L Sbjct: 49 LLKKAEILTEKDPA--------GRAATYNNLACYYRRQGKLHSALQYLQKALKIESKLPNVQNPADTHINACAVLSQLGRHQTALEHAQSALILLQEEL 139 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10493.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10493.1.1 >prot_C-tenellus_contig10493.1.1 ID=prot_C-tenellus_contig10493.1.1|Name=mRNA_C-tenellus_contig10493.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=105bp IKGAFCLLDKAKILTGPGQPYLTRYRLQTRAITLNNLGCLMKRWGKPRVGback to top mRNA from alignment at C-tenellus_contig10493:4728..5042+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10493.1.1 ID=mRNA_C-tenellus_contig10493.1.1|Name=mRNA_C-tenellus_contig10493.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=315bp|location=Sequence derived from alignment at C-tenellus_contig10493:4728..5042+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10493:4728..5042+ >mRNA_C-tenellus_contig10493.1.1 ID=mRNA_C-tenellus_contig10493.1.1|Name=mRNA_C-tenellus_contig10493.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=315bp|location=Sequence derived from alignment at C-tenellus_contig10493:4728..5042+ (Choristocarpus tenellus KU2346)back to top |