mRNA_C-tenellus_contig10490.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10490.1.1 vs. uniprot
Match: D8LFD5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFD5_ECTSI) HSP 1 Score: 136 bits (343), Expect = 2.130e-33 Identity = 89/192 (46.35%), Postives = 119/192 (61.98%), Query Frame = 1 Query: 82 KFLWAETPMLAKEHNLCATGPALKEALNRY-PGLGRFLEHFRVLARMTPDLKEEVAAALIESGRTVLMCGDGSNDVGALKKSHVGLALLSGFGDVNTDTPSGKSNVKSGDKDSSFGIGGKEKAEEEEEQSGPG-------LKKKSAKEIRDAAKTLLQRELEELMQDHKSKGELPPIKSVFQVIKASNHREA 633 +F W LA H+LCATGPA AL P LG + HFRVLARMTP LKEE+A L+E+G+TVLMCGDGSNDVGAL++SHVGLALLSGFGD NTD +S +S S G K K ++E +SG G L+ K+A EI + +Q ++ E +S+G + P K++++ A+N + + Sbjct: 1163 EFSWGGMEGLAATHDLCATGPAFALALGEEDPALGSAIHHFRVLARMTPGLKEELATLLMEAGKTVLMCGDGSNDVGALRRSHVGLALLSGFGDANTD----ESKSESPSVTSDGGATTKNKGKDETVKSGGGGGDRAGALEGKNAAEILKEEREKVQADITEEFDRLRSEG-VNPAKAMWKASSAANKKRS 1349
BLAST of mRNA_C-tenellus_contig10490.1.1 vs. uniprot
Match: A0A6H5KDZ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDZ3_9PHAE) HSP 1 Score: 136 bits (342), Expect = 2.350e-33 Identity = 85/191 (44.50%), Postives = 121/191 (63.35%), Query Frame = 1 Query: 82 KFLWAETPMLAKEHNLCATGPALKEALNRY-PGLGRFLEHFRVLARMTPDLKEEVAAALIESGRTVLMCGDGSNDVGALKKSHVGLALLSGFGDVNTDTPSGKSNVKSGDKDSSFGIGGKEKAEEEEEQSGPG------LKKKSAKEIRDAAKTLLQRELEELMQDHKSKGELPPIKSVFQVIKASNHREA 633 +F W LA H+LCATGPA A+ P +G + HFRVLARMTP LKEE+A L+E+G+TVLMCGDGSNDVGAL++SHVGLALLSGFGD NTD ++ + + D D G +K+++E +SG G L+ K+A EI + +Q ++ E +S+G + P K++++ A+N + + Sbjct: 236 EFSWGGMEGLAATHDLCATGPAFALAIGEEDPAMGSAIHHFRVLARMTPGLKEELATLLMEAGKTVLMCGDGSNDVGALRRSHVGLALLSGFGDANTDESKSEAPLLTSDSD---GGATTDKSKDETVKSGGGGARAGALEGKNAAEILKEEREKVQADITEEFDRLRSEG-VNPAKAMWKASSAANKKRS 422
BLAST of mRNA_C-tenellus_contig10490.1.1 vs. uniprot
Match: W7TW81_9STRA (p-atpase family transporter: cation n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TW81_9STRA) HSP 1 Score: 110 bits (275), Expect = 2.640e-24 Identity = 55/103 (53.40%), Postives = 72/103 (69.90%), Query Frame = 1 Query: 97 ETPMLAKEHNLCATGPALKEALNRYPGLGRFLEHFRVLARMTPDLKEEVAAALIESGRTVLMCGDGSNDVGALKKSHVGLALLSGFGDVNTDTPSGKSNVKSG 405 + P+LA++++LC G L A +P L R LEHF V ARMTPD KE V +L GR +MCGDG+NDVGALK++ VG+ALLSGFGD+N D +G +N +G Sbjct: 1046 KVPLLARDYDLCTAGMPLAVASKVHPALRRHLEHFVVFARMTPDEKEAVITSLKAEGRVCMMCGDGANDVGALKQADVGVALLSGFGDLNVDRGTGAANDSTG 1148
BLAST of mRNA_C-tenellus_contig10490.1.1 vs. uniprot
Match: A0A6H5JWH2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JWH2_9PHAE) HSP 1 Score: 105 bits (261), Expect = 1.930e-22 Identity = 50/92 (54.35%), Postives = 65/92 (70.65%), Query Frame = 1 Query: 106 MLAKEHNLCATGPALKEALNRYPGLGRFLEHFRVLARMTPDLKEEVAAALIESGRTVLMCGDGSNDVGALKKSHVGLALLSGFGDVNTDTPS 381 ML+ H+L TG L AL +P + L++ +V ARMTPD KE + AL +SGRT +MCGDG+NDVGALK++ VG+ALL GFGD+N D S Sbjct: 926 MLSLTHSLAVTGKVLVAALEEFPSFSKSLQYLKVFARMTPDEKETLVLALKDSGRTCMMCGDGANDVGALKQAQVGVALLGGFGDINVDRSS 1017
BLAST of mRNA_C-tenellus_contig10490.1.1 vs. uniprot
Match: A0A7S3V8N7_9STRA (Hypothetical protein n=3 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V8N7_9STRA) HSP 1 Score: 104 bits (259), Expect = 3.590e-22 Identity = 60/137 (43.80%), Postives = 77/137 (56.20%), Query Frame = 1 Query: 1 GELQWCHLQEDDKVEQLCANASWKFPRKFLWAETPMLAKEHNLCATGPALKEALNRYPGLGRFLEHFRVLARMTPDLKEEVAAALIESGRTVLMCGDGSNDVGALKKSHVGLALLSGFGDVNTDT-PSGKSNVKSGD 408 G + W +D +V F+ A+ P LAK ++L TG L+ A + G + L HF++ ARMTPD KE V L G LMCGDG+NDVGALK++ VG+ALL+GFGDVN D GK SGD Sbjct: 966 GMMFWQSYDDDSRVAD------------FIAADVPKLAKSYDLATTGKNLQSAFDFDEGTKQVLAHFKIFARMTPDAKETVIECLHSVGALCLMCGDGANDVGALKQADVGVALLTGFGDVNVDKGEDGKKKKTSGD 1090
BLAST of mRNA_C-tenellus_contig10490.1.1 vs. uniprot
Match: B5YNZ0_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YNZ0_THAPS) HSP 1 Score: 103 bits (258), Expect = 4.710e-22 Identity = 57/124 (45.97%), Postives = 70/124 (56.45%), Query Frame = 1 Query: 1 GELQWCHLQEDDKVEQLCANASWKFPRKFLWAETPMLAKEHNLCATGPALKEALNRYPGLGRFLEHFRVLARMTPDLKEEVAAALIESGRTVLMCGDGSNDVGALKKSHVGLALLSGFGDVNTD 372 G + W +D + + AN E P LAK ++L TG L+ A LEHF+V ARMTPD KE V L G+ LMCGDG+NDVGALK++ VG+ALLSGFGDVN D Sbjct: 683 GTMYWLRYDDDTRGSRYVAN------------EVPKLAKSYDLAVTGNNLETAYEYDVATKTILEHFKVFARMTPDAKETVIECLHSVGKLCLMCGDGANDVGALKQADVGVALLSGFGDVNVD 794
BLAST of mRNA_C-tenellus_contig10490.1.1 vs. uniprot
Match: K3X9P6_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X9P6_GLOUD) HSP 1 Score: 103 bits (257), Expect = 6.570e-22 Identity = 52/124 (41.94%), Postives = 73/124 (58.87%), Query Frame = 1 Query: 1 GELQWCHLQEDDKVEQLCANASWKFPRKFLWAETPMLAKEHNLCATGPALKEALNRYPGLGRFLEHFRVLARMTPDLKEEVAAALIESGRTVLMCGDGSNDVGALKKSHVGLALLSGFGDVNTD 372 GEL W ++D KV+ + ++ P+L K+++LC G L A + + + H RV ARMTP+LKE+V L ++G LMCGDG NDVGALK++H+G+ALL GFG N D Sbjct: 856 GELVWTRAEDDSKVDA------------YKSSDIPILEKKYDLCVNGKTLAAASEIDDVIWKHMHHIRVFARMTPELKEKVLTFLKKNGHHTLMCGDGGNDVGALKQAHIGVALLGGFGSANAD 967
BLAST of mRNA_C-tenellus_contig10490.1.1 vs. uniprot
Match: A0A7S0RGZ7_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RGZ7_9CHLO) HSP 1 Score: 99.0 bits (245), Expect = 8.820e-22 Identity = 53/96 (55.21%), Postives = 66/96 (68.75%), Query Frame = 1 Query: 85 FLWAETPMLAKE-HNLCATGPALKEALNRYPGLGRFLEHFRVLARMTPDLKEEVAAALIESGRTVLMCGDGSNDVGALKKSHVGLALLSGFGDVNT 369 F+ AE P L E ++LCATG AL+ A + P + +E V ARM P+ KE V AL E G+ LMCGDG+NDVGALK++HVG+ALLSGFG NT Sbjct: 52 FVAAEMPKLRAEGYDLCATGDALRAAAVQDPKIWEHVEEISVYARMAPEDKERVIRALRERGQHTLMCGDGANDVGALKQAHVGVALLSGFGSANT 147
BLAST of mRNA_C-tenellus_contig10490.1.1 vs. uniprot
Match: A0A7S1ZGT6_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZGT6_TRICV) HSP 1 Score: 102 bits (255), Expect = 1.160e-21 Identity = 57/124 (45.97%), Postives = 71/124 (57.26%), Query Frame = 1 Query: 1 GELQWCHLQEDDKVEQLCANASWKFPRKFLWAETPMLAKEHNLCATGPALKEALNRYPGLGRFLEHFRVLARMTPDLKEEVAAALIESGRTVLMCGDGSNDVGALKKSHVGLALLSGFGDVNTD 372 G L W + ++ K+++ A A P LAKE++L TG L A R L HF++ ARMTPD KE V L G LMCGDG+NDVGALK++ VG+ALLSGFGDVN D Sbjct: 450 GVLYWQNYDDETKLQEFTA------------AGVPDLAKEYDLATTGKNLSAAFEYDDETKRVLAHFKIFARMTPDAKETVIECLHSIGNLCLMCGDGANDVGALKQADVGVALLSGFGDVNVD 561
BLAST of mRNA_C-tenellus_contig10490.1.1 vs. uniprot
Match: A0A7S4HIT1_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HIT1_9STRA) HSP 1 Score: 102 bits (254), Expect = 1.670e-21 Identity = 58/120 (48.33%), Postives = 72/120 (60.00%), Query Frame = 1 Query: 22 LQEDDKVEQL---CANASWKFPRKFLWAETPMLAKEHNLCATGPALKEALNRYPGLGRFLEHFRVLARMTPDLKEEVAAALIESGRTVLMCGDGSNDVGALKKSHVGLALLSGFGDVNTD 372 + E DK+ L C + K ++ AE P LAK+++L TG L A G L HF + ARMTPD KE+V L G LMCGDG+NDVGALK++ VG+ALLSGFGDVN D Sbjct: 980 ILEQDKLGMLYWQCYDKEVKV-HDYIAAEVPELAKKYDLATTGKNLAAAFESDEGTTSVLAHFSIFARMTPDAKEKVIECLHSVGALCLMCGDGANDVGALKQADVGVALLSGFGDVNVD 1098 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10490.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10490.1.1 >prot_C-tenellus_contig10490.1.1 ID=prot_C-tenellus_contig10490.1.1|Name=mRNA_C-tenellus_contig10490.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=214bp GELQWCHLQEDDKVEQLCANASWKFPRKFLWAETPMLAKEHNLCATGPALback to top mRNA from alignment at C-tenellus_contig10490:1493..5412+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10490.1.1 ID=mRNA_C-tenellus_contig10490.1.1|Name=mRNA_C-tenellus_contig10490.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3920bp|location=Sequence derived from alignment at C-tenellus_contig10490:1493..5412+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10490:1493..5412+ >mRNA_C-tenellus_contig10490.1.1 ID=mRNA_C-tenellus_contig10490.1.1|Name=mRNA_C-tenellus_contig10490.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=642bp|location=Sequence derived from alignment at C-tenellus_contig10490:1493..5412+ (Choristocarpus tenellus KU2346)back to top |