mRNA_C-tenellus_contig10484.1.2 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10484.1.2 vs. uniprot
Match: D7G8Z2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Z2_ECTSI) HSP 1 Score: 106 bits (265), Expect = 9.710e-23 Identity = 48/77 (62.34%), Postives = 61/77 (79.22%), Query Frame = 1 Query: 343 WHQVLRKLIRKKDALVVFAGDTNLREAEIKSEALAKEVGDMWKLCGSDPEVRFTWDLLKNDNKDFGS-FKPRARYDR 570 ++QV+++L+ + +FAGDTNLREAE+K E LAKE GDMW+LCG+DPE RFTWD+ NDN FG F+PRARYDR Sbjct: 120 FNQVMKQLLAFRGGPAIFAGDTNLREAEVKQEKLAKEAGDMWQLCGADPERRFTWDMANNDNLVFGGGFQPRARYDR 196
BLAST of mRNA_C-tenellus_contig10484.1.2 vs. uniprot
Match: UPI001BB151BD (tyrosyl-DNA phosphodiesterase 2-like isoform X1 n=3 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB151BD) HSP 1 Score: 103 bits (258), Expect = 4.280e-21 Identity = 49/114 (42.98%), Postives = 72/114 (63.16%), Query Frame = 1 Query: 367 IRKKDALVVFAGDTNLREAEIKSEA-LAKEVGDMWKLCGSDPEVRFTWDLLKNDNKDF--GSFKPRARYDRVFTSPTASE----GALSFDLLGRERMAPESCFPSDHFGVDCIF 687 I+ D +V+F GDTNLR+ EI S + K + D+W+ CG+DP+ +FTWD NDN D+ G +KP+ R+DR++ P A SF L+G++R+ FPSDH+G+ C F Sbjct: 162 IQDPDRVVIFGGDTNLRDKEITSMGGVPKGIIDLWEACGADPKTKFTWDTTTNDNLDWESGRYKPKIRFDRLYIRPAAGHCTNLSISSFTLIGKDRLPGCGRFPSDHYGIVCDF 275
BLAST of mRNA_C-tenellus_contig10484.1.2 vs. uniprot
Match: L7MCB7_RHIPC (Putative mg2+-dependent phosphodiesterase ttrap (Fragment) n=7 Tax=Rhipicephalinae TaxID=426437 RepID=L7MCB7_RHIPC) HSP 1 Score: 103 bits (257), Expect = 2.990e-20 Identity = 52/121 (42.98%), Postives = 78/121 (64.46%), Query Frame = 1 Query: 343 WHQVLRKLIRKKDA-LVVFAGDTNLREAEIKSEA-LAKEVGDMWKLCGSDPEVRFTWDLLKNDNKDF-GSFKPRARYDRVF---TSPTASEGALSFDLLGRERMAPESCFPSDHFGVDCIF 687 +++ L+K I++ D V+F GD NLR++E++ L + V D+W+ CG EVR+TWD+ +NDN + G FKPR R+DRV+ P + A F ++G ER+ P CFPSDH+G+ C F Sbjct: 263 FYKCLKKCIKEPDERTVIFGGDLNLRDSEVEDMGGLPQGVKDVWESCGQRKEVRYTWDMTRNDNVTWNGRFKPRCRFDRVYIRAAKPPTMKPAF-FGMVGLERLKPHRCFPSDHWGLLCHF 382
BLAST of mRNA_C-tenellus_contig10484.1.2 vs. uniprot
Match: G3MGE1_AMBMU (Endo/exonuclease/phosphatase domain-containing protein (Fragment) n=3 Tax=Amblyomma TaxID=6942 RepID=G3MGE1_AMBMU) HSP 1 Score: 102 bits (254), Expect = 9.340e-20 Identity = 49/119 (41.18%), Postives = 78/119 (65.55%), Query Frame = 1 Query: 346 HQVLRKLIRKK-DALVVFAGDTNLREAEIKS-EALAKEVGDMWKLCGSDPEVRFTWDLLKNDNKDF-GSFKPRARYDRVFT--SPTASEGALSFDLLGRERMAPESCFPSDHFGVDCIF 687 ++ +K +++ + V+F GD NLR++E++ L + D+W+LCG EVR+TWD+++NDN + G FKPR R+DR++T + A+ F L+G ER+ P CFPSDH+G+ C F Sbjct: 285 YKCFKKCLKEPAERTVIFGGDLNLRDSEVRDLGGLPGGLKDVWELCGQRKEVRYTWDMVRNDNVTWNGRFKPRCRFDRIYTRAAKPATLVPAFFGLVGLERLKPHRCFPSDHWGLLCHF 403
BLAST of mRNA_C-tenellus_contig10484.1.2 vs. uniprot
Match: A0A7R9JPT2_TIMGE (Hypothetical protein n=3 Tax=Timema TaxID=61471 RepID=A0A7R9JPT2_TIMGE) HSP 1 Score: 98.2 bits (243), Expect = 1.210e-18 Identity = 47/109 (43.12%), Postives = 70/109 (64.22%), Query Frame = 1 Query: 376 KDALVVFAGDTNLREAEIKS-EALAKEVGDMWKLCGSDPEVRFTWDLLKNDNKDF-GSFKPRARYDRVFTSPTASEGALS--FDLLGRERMAPESCFPSDHFGVDCIFT 690 +D V+FAGD NLR+ E++ L V D+WK CGS E ++TWD+L+N NK+F G FKPR+R+DR++ + + + F LLG E+++ FPSDH+G+ F Sbjct: 236 EDTTVIFAGDLNLRDKELEQLGGLPPGVEDLWKTCGSRKECQYTWDMLRNSNKEFPGRFKPRSRFDRIYLRHSHPQRVVPVHFGLLGIEKVSGTQTFPSDHWGLRVFFN 344
BLAST of mRNA_C-tenellus_contig10484.1.2 vs. uniprot
Match: A0A1E1XDE0_9ACAR (Putative mg2+-dependent phosphodiesterase ttrap n=1 Tax=Amblyomma aureolatum TaxID=187763 RepID=A0A1E1XDE0_9ACAR) HSP 1 Score: 95.9 bits (237), Expect = 1.410e-18 Identity = 52/116 (44.83%), Postives = 73/116 (62.93%), Query Frame = 1 Query: 355 LRKLIR--KKDA---LVVFAGDTNLREAEIKS-EALAKEVGDMWKLCGSDPEVRFTWDLLKNDNKDFGSFK-PRARYDRVFT--SPTASEGALSFDLLGRERMAPESCFPSDHFGV 675 LR+ R KK+A V+F GD NLR+ E+ + V D+W+ CGSDPE+R+TWD++ NDN DFG R R+DRV+ S A+ F L+G++R+ E CFPSDH+G+ Sbjct: 128 LRRCFRQCKKEASEKTVIFGGDLNLRDHEVDACGGPPAGVEDVWEACGSDPELRYTWDMMCNDNLDFGGRNNARLRFDRVYIRHSQPATFAPACFQLIGQKRLPVERCFPSDHWGL 243
BLAST of mRNA_C-tenellus_contig10484.1.2 vs. uniprot
Match: A0A023GEY8_AMBTT (Putative mg2+-dependent phosphodiesterase ttrap (Fragment) n=1 Tax=Amblyomma triste TaxID=251400 RepID=A0A023GEY8_AMBTT) HSP 1 Score: 93.2 bits (230), Expect = 2.560e-18 Identity = 44/100 (44.00%), Postives = 67/100 (67.00%), Query Frame = 1 Query: 388 VVFAGDTNLREAEIKS-EALAKEVGDMWKLCGSDPEVRFTWDLLKNDNKDFGSFK-PRARYDRVFT--SPTASEGALSFDLLGRERMAPESCFPSDHFGV 675 V+F GD NLR+ E+ + + + D+W++CGSDP++ +TWD+ +NDN DFG R R+DRV+ S A+ SF L+G++R+ E CFPSDH+G+ Sbjct: 75 VIFGGDLNLRDHEVDACGGVPAGMEDLWEVCGSDPDLCYTWDMTRNDNLDFGGRNNARLRFDRVYIRHSQPATFVPASFQLIGQKRLQVELCFPSDHWGL 174
BLAST of mRNA_C-tenellus_contig10484.1.2 vs. uniprot
Match: A0A7R9CA14_TIMCR (Hypothetical protein n=1 Tax=Timema cristinae TaxID=61476 RepID=A0A7R9CA14_TIMCR) HSP 1 Score: 95.5 bits (236), Expect = 2.890e-18 Identity = 46/109 (42.20%), Postives = 69/109 (63.30%), Query Frame = 1 Query: 376 KDALVVFAGDTNLREAEIKS-EALAKEVGDMWKLCGSDPEVRFTWDLLKNDNKDF-GSFKPRARYDRVFTSPTASEGALS--FDLLGRERMAPESCFPSDHFGVDCIFT 690 +D V+FAGD NLR+ E++ V D+WK CGS E ++TWD+L+N NK+F G FKPR+R+DR++ + + + F LLG E+++ FPSDH+G+ F Sbjct: 159 EDTTVIFAGDLNLRDKELEQLGGPPPGVEDLWKTCGSRKECQYTWDMLRNSNKEFPGRFKPRSRFDRIYLRHSHPQRVVPVHFGLLGIEKVSGTQTFPSDHWGLRVFFN 267
BLAST of mRNA_C-tenellus_contig10484.1.2 vs. uniprot
Match: UPI0014258FB4 (tyrosyl-DNA phosphodiesterase 2-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI0014258FB4) HSP 1 Score: 94.0 bits (232), Expect = 1.170e-17 Identity = 47/109 (43.12%), Postives = 70/109 (64.22%), Query Frame = 1 Query: 379 DALVVFAGDTNLREAEIKS--EALAKEVGDMWKLCGSDPEVRFTWDLLKNDNKDFG-SFKPRARYDRVFT--SPTASEGAL-SFDLLGRERMAPESCFPSDHFGVDCIF 687 D +V+F GDTNLR+ E+ + + + D+W+L G + ++TWD +NDNK+ KPR R+DR++ + TA + +L SF L+G ER+A CFPSDHFG+ C F Sbjct: 170 DTVVLFGGDTNLRDREVSEMGDKIPGGIFDLWELFGCPEDAKYTWDTERNDNKELPFPNKPRLRFDRLYLRQAKTAPKVSLQSFKLIGEERIAAVDCFPSDHFGIFCEF 278
BLAST of mRNA_C-tenellus_contig10484.1.2 vs. uniprot
Match: A0A7S4LFJ9_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4LFJ9_9EUGL) HSP 1 Score: 94.4 bits (233), Expect = 1.630e-17 Identity = 49/100 (49.00%), Postives = 62/100 (62.00%), Query Frame = 1 Query: 391 VFAGDTNLREAEIKSEALAKEVGDMWKLCGSDPEVRFTWDLLKNDNKDFG-SFKPRARYDRVFTSPTASEGALSFDLLGRERMAPESCFPSDHFGVD-CI 684 +FAGDTNLREAE ++E + D W CG D +FTWDL KN NK+ +PRARYDR++ + F LLG ++MA E C PSDHFG+ CI Sbjct: 220 IFAGDTNLREAEAQAEKRLARMTDAWVACGRDKSAQFTWDLQKNHNKEMPCQSQPRARYDRLWVNEKFE--VQDFRLLGTDKMA-EGCHPSDHFGISACI 316 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10484.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10484.1.2 >prot_C-tenellus_contig10484.1.2 ID=prot_C-tenellus_contig10484.1.2|Name=mRNA_C-tenellus_contig10484.1.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=164bp MYGLPQHLCRYAFVVAAIFGRLALCVYPISYTFFCHCDVIHTLFLAWHQVback to top mRNA from alignment at C-tenellus_contig10484:2..3833- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10484.1.2 ID=mRNA_C-tenellus_contig10484.1.2|Name=mRNA_C-tenellus_contig10484.1.2|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3832bp|location=Sequence derived from alignment at C-tenellus_contig10484:2..3833- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10484:2..3833- >mRNA_C-tenellus_contig10484.1.2 ID=mRNA_C-tenellus_contig10484.1.2|Name=mRNA_C-tenellus_contig10484.1.2|organism=Choristocarpus tenellus KU2346|type=CDS|length=492bp|location=Sequence derived from alignment at C-tenellus_contig10484:2..3833- (Choristocarpus tenellus KU2346)back to top |