mRNA_C-tenellus_contig10479.2.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10479.2.1 vs. uniprot
Match: D8LJA1_ECTSI (Phenylalanine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJA1_ECTSI) HSP 1 Score: 229 bits (585), Expect = 4.280e-64 Identity = 119/152 (78.29%), Postives = 129/152 (84.87%), Query Frame = 2 Query: 452 MPTLGVNRDDLFEALGQQYTQDEFDELCFEFGIELDDVTSEAEEIEK---GGGAAGDA---STDIVYKIDIPANRYDLLCIEGLSRALRVFLGKEDAPLFRRVEPEGGEGARQSITVKADTAKIRPYVVCAVLRGVSFTVKSYASFMDLQVK 889 MPTLGVNRDDLFEALG YT+ EFDELCFEFGIELD+VTSEA E+EK GGG AG A STD+VYKIDIPANRYDLLCIEGL+RALRVFLGKED+P+FR VEP GG GARQ +TV + AKIRPYVVCAVLRGV+F KSY SFMDLQ K Sbjct: 1 MPTLGVNRDDLFEALGHVYTEKEFDELCFEFGIELDEVTSEAIELEKQSQGGGRAGGAGAASTDVVYKIDIPANRYDLLCIEGLARALRVFLGKEDSPVFRTVEPAGGAGARQKMTVGSGAAKIRPYVVCAVLRGVTFNSKSYKSFMDLQDK 152
BLAST of mRNA_C-tenellus_contig10479.2.1 vs. uniprot
Match: A0A7S1U5G5_9STRA (Phenylalanine--tRNA ligase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U5G5_9STRA) HSP 1 Score: 198 bits (504), Expect = 3.850e-52 Identity = 97/150 (64.67%), Postives = 121/150 (80.67%), Query Frame = 2 Query: 446 ATMPTLGVNRDDLFEALGQQYTQDEFDELCFEFGIELDDVTSEAEEIEKGG--GAAGDASTDIVYKIDIPANRYDLLCIEGLSRALRVFLGKEDAPLFRRVEPEGGEGARQSITVKADTAKIRPYVVCAVLRGVSFTVKSYASFMDLQVK 889 + MPT+GV RDDLFEALG+ YTQDEF+ LCFEFG+ELDDVTSEAE+ K AA D S +++YKID+PANRYDLLCIEG++RALR+FLG + AP + +EP G GAR ++TV+A TA +RP+VVCAVLRGV+FT K Y SF++LQ K Sbjct: 32 SAMPTVGVVRDDLFEALGRTYTQDEFELLCFEFGVELDDVTSEAEQARKMNKDSAAADLSEEVIYKIDVPANRYDLLCIEGIARALRIFLGTQPAPTYEVLEPAAGAGARLAMTVEAPTAGVRPHVVCAVLRGVTFTPKRYQSFIELQDK 181
BLAST of mRNA_C-tenellus_contig10479.2.1 vs. uniprot
Match: A0A835YVN2_9STRA (Phenylalanine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVN2_9STRA) HSP 1 Score: 185 bits (469), Expect = 1.090e-47 Identity = 95/146 (65.07%), Postives = 116/146 (79.45%), Query Frame = 2 Query: 452 MPTLGVNRDDLFEALGQQYTQDEFDELCFEFGIELDDVTSEAEEIEKGGGAAGDASTDIVYKIDIPANRYDLLCIEGLSRALRVFLGKEDAPLFRRVEPEGGEGARQSITVKADTAKIRPYVVCAVLRGVSFTVKSYASFMDLQVK 889 MPT+GV RDDLF+ALG++YT++EFDELCFEFGIELD+VT+E E A G T I+YK+DIPANRYDLLC+EGL+RAL +FLG+ P FR VEP G+ RQ+ITVK TA+IRPYVVCAVLRGV+F ++Y SF+DLQ K Sbjct: 1 MPTVGVVRDDLFKALGKEYTEEEFDELCFEFGIELDEVTTEPAE------APGQEPT-IIYKLDIPANRYDLLCLEGLARALNIFLGRASPPDFRLVEPASGQ--RQTITVKPSTAQIRPYVVCAVLRGVTFDARTYKSFIDLQDK 137
BLAST of mRNA_C-tenellus_contig10479.2.1 vs. uniprot
Match: A0A4Z2CAU2_9TELE (Phenylalanine--tRNA ligase beta subunit n=1 Tax=Takifugu bimaculatus TaxID=433685 RepID=A0A4Z2CAU2_9TELE) HSP 1 Score: 167 bits (424), Expect = 4.920e-46 Identity = 88/148 (59.46%), Postives = 109/148 (73.65%), Query Frame = 2 Query: 452 MPTLGVNRDDLFEALGQQYTQDEFDELCFEFGIELDDVTSEAEEI--EKGGGAAGDASTDIVYKIDIPANRYDLLCIEGLSRALRVFLGKEDAPLFRRVEPEGGEGARQSITVKADTAKIRPYVVCAVLRGVSFTVKSYASFMDLQVK 889 MPT+GV RD LF+ALG+ YT +EFDELCFEFG+ELD++TSE E I EKG A AS I+YKID+PANRYDLLC+EGL R ++VF K +AP +RRV P G+ R IT DTA +RPY V AVLR ++FT + Y SF++LQ K Sbjct: 1 MPTVGVKRDLLFQALGRTYTDEEFDELCFEFGLELDEITSEKEIISKEKGDCKASGASEVILYKIDVPANRYDLLCLEGLVRGMQVFKNKMEAPRYRRVGPARGQPQRLVIT--KDTAAVRPYAVAAVLRDITFTQERYDSFIELQEK 146
BLAST of mRNA_C-tenellus_contig10479.2.1 vs. uniprot
Match: A0A0D2N0B8_9CHLO (Phenylalanyl-tRNA synthetase, beta subunit n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2N0B8_9CHLO) HSP 1 Score: 166 bits (420), Expect = 2.200e-45 Identity = 86/151 (56.95%), Postives = 110/151 (72.85%), Query Frame = 2 Query: 452 MPTLGVNRDDLFEALGQQYTQDEFDELCFEFGIELDDVTSEAEEIEKG-GGAAGDA------STDIVYKIDIPANRYDLLCIEGLSRALRVFLGKEDAPLFRRVEPEGGEGARQSITVKADTAKIRPYVVCAVLRGVSFTVKSYASFMDLQ 883 MP +GVNRD LF+ALG+ YT +EFD LCFE+GIELDDVTSE E + K G AAGDA S +++YKIDIPANRYD+LC+EG++RAL VF G+ +AP +R + G Q + V+ +TA +RP+VV A+LRGVSF Y SF+DLQ Sbjct: 1 MPVVGVNRDRLFQALGRTYTDEEFDALCFEYGIELDDVTSEKELLRKEHGAAAGDAAQFAGASDEVIYKIDIPANRYDMLCLEGIARALNVFKGRVEAPQYRLADMRGKP--MQQLIVRPETALVRPFVVAAILRGVSFDPVKYDSFIDLQ 149
BLAST of mRNA_C-tenellus_contig10479.2.1 vs. uniprot
Match: A0A0S7HHU2_9TELE (Phenylalanine--tRNA ligase beta subunit n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7HHU2_9TELE) HSP 1 Score: 168 bits (426), Expect = 1.010e-44 Identity = 87/148 (58.78%), Postives = 110/148 (74.32%), Query Frame = 2 Query: 452 MPTLGVNRDDLFEALGQQYTQDEFDELCFEFGIELDDVTSEAEEI--EKGGGAAGDASTDIVYKIDIPANRYDLLCIEGLSRALRVFLGKEDAPLFRRVEPEGGEGARQSITVKADTAKIRPYVVCAVLRGVSFTVKSYASFMDLQVK 889 MPT+GV RD LF+ALG+ YT +EFDELCFEFG+ELD++TSE E I E+G A DAS I+YKID+PANRYDLLC+EGL R L+VF K +AP +RR+ P GE R IT +TA +RP+ V AVLR ++FT + Y SF++LQ K Sbjct: 1 MPTVGVKRDFLFKALGRTYTDEEFDELCFEFGLELDEITSEREIISKEQGDSKASDASDVILYKIDVPANRYDLLCLEGLVRGLQVFKNKLEAPRYRRLSPGSGEPQRLIIT--KETAAVRPHAVAAVLRNITFTQQRYDSFIELQEK 146
BLAST of mRNA_C-tenellus_contig10479.2.1 vs. uniprot
Match: A0A8D8B4M6_CULPI (Phenylalanine--tRNA ligase beta subunit n=1 Tax=Culex pipiens TaxID=7175 RepID=A0A8D8B4M6_CULPI) HSP 1 Score: 166 bits (420), Expect = 4.630e-44 Identity = 87/149 (58.39%), Postives = 110/149 (73.83%), Query Frame = 2 Query: 452 MPTLGVNRDDLFEALGQQYTQDEFDELCFEFGIELDDVTSEAEEIEKGGG---AAGDASTDIVYKIDIPANRYDLLCIEGLSRALRVFLGKEDAPLFRRVEPEGGEGARQSITVKADTAKIRPYVVCAVLRGVSFTVKSYASFMDLQVK 889 MPT+GV RD LF+ALG+ YT DEF +LCFEFG+ELD+VT+E + I K G AA DAS D++Y+IDIPANRYDLLC+EGL + L+VFLGK P F++V P G+ Q + + T +IRP+ V AVLR V+FT SYASF+DLQ K Sbjct: 1 MPTVGVKRDLLFKALGKTYTDDEFQKLCFEFGLELDEVTTEKQMITKEQGEVDAAKDASEDVIYRIDIPANRYDLLCLEGLVQGLQVFLGKMKFPEFKKVAPVKGD--LQKLVIMEATKQIRPFAVAAVLRDVTFTKDSYASFIDLQDK 147
BLAST of mRNA_C-tenellus_contig10479.2.1 vs. uniprot
Match: A0A7S2BP41_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BP41_9STRA) HSP 1 Score: 167 bits (423), Expect = 5.080e-44 Identity = 90/150 (60.00%), Postives = 111/150 (74.00%), Query Frame = 2 Query: 452 MPTLGVNRDDLFEALGQQYTQDEFDELCFEFGIELDDVTSEAEEI--EKGGGAAGDASTDIVYKIDIPANRYDLLCIEGLSRALRVFLGKEDAPLFRRVEPEGGEGARQSITVKADTAKI--RPYVVCAVLRGVSFTVKSYASFMDLQVK 889 MPT+GV RDDLFE LG+ YT++EFDELCFEFGIELD+VTSEAE E+ G A T ++YKIDIPANRYDLLCIEG++RALR+F G + AP +R +EPE Q + VK+ K RP+VV AVLRG++F K+Y SF+DLQ K Sbjct: 23 MPTVGVIRDDLFERLGRTYTEEEFDELCFEFGIELDEVTSEAEMATKEQKGKALEGLDTTVIYKIDIPANRYDLLCIEGITRALRIFKGLDPAPTYRMLEPE----QPQVMRVKSANCKTVPRPFVVSAVLRGMTFDEKAYKSFIDLQDK 168
BLAST of mRNA_C-tenellus_contig10479.2.1 vs. uniprot
Match: A0A7R9QHG7_9ACAR (Phenylalanine--tRNA ligase beta subunit (Fragment) n=1 Tax=Medioppia subpectinata TaxID=1979941 RepID=A0A7R9QHG7_9ACAR) HSP 1 Score: 162 bits (409), Expect = 5.120e-44 Identity = 82/146 (56.16%), Postives = 107/146 (73.29%), Query Frame = 2 Query: 452 MPTLGVNRDDLFEALGQQYTQDEFDELCFEFGIELDDVTSEAE--EIEKGGGAAGDASTDIVYKIDIPANRYDLLCIEGLSRALRVFLGKEDAPLFRRVEPEGGEGARQSITVKADTAKIRPYVVCAVLRGVSFTVKSYASFMDLQ 883 MPT+ VNRD LF+ L Q+T++EFD LCFEFGIELD+VTSE + E+G + AS D++Y+I+IPANRYDLLCIEGL RAL +FLGK + P +R VEP +G Q + V +T ++RPY V A+LRG+ FT + Y SF+DLQ Sbjct: 1 MPTINVNRDQLFKLLDTQFTEEEFDNLCFEFGIELDEVTSEKQMKTKEQGMDRSKGASEDVLYRIEIPANRYDLLCIEGLVRALLIFLGKAEIPEYRSVEPP--KGKLQQLIVLPNTMQVRPYAVAAILRGIHFTQEIYESFIDLQ 144
BLAST of mRNA_C-tenellus_contig10479.2.1 vs. uniprot
Match: UPI0009A2901D (phenylalanine--tRNA ligase beta subunit-like n=1 Tax=Rhincodon typus TaxID=259920 RepID=UPI0009A2901D) HSP 1 Score: 164 bits (416), Expect = 6.610e-44 Identity = 86/161 (53.42%), Postives = 113/161 (70.19%), Query Frame = 2 Query: 425 NIYSYWRA----TMPTLGVNRDDLFEALGQQYTQDEFDELCFEFGIELDDVTSEAEEI--EKGGGAAGDASTDIVYKIDIPANRYDLLCIEGLSRALRVFLGKEDAPLFRRVEPEGGEGARQSITVKADTAKIRPYVVCAVLRGVSFTVKSYASFMDLQVK 889 + S W++ TMPT+ V RD LFEALGQ YT +EFD LCFEFG+ELD+VTSE + I E+G G A AS I+YKID+PANRYDLLC+EGL+R L+VF + +AP + RV P G+ Q + + +TA++RP+ V AVLR + FT Y SF++LQ K Sbjct: 2 RVCSLWQSLPVFTMPTVSVKRDLLFEALGQAYTDEEFDALCFEFGLELDEVTSEKDIISREQGDGKAEGASDVILYKIDVPANRYDLLCLEGLARGLQVFKARIEAPRYTRVGPPNGD--MQKLIITKETAQVRPHAVAAVLRNIKFTKDRYDSFIELQEK 160 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10479.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10479.2.1 >prot_C-tenellus_contig10479.2.1 ID=prot_C-tenellus_contig10479.2.1|Name=mRNA_C-tenellus_contig10479.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=149bp MPTLGVNRDDLFEALGQQYTQDEFDELCFEFGIELDDVTSEAEEIEKGGGback to top mRNA from alignment at C-tenellus_contig10479:1966..5219+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10479.2.1 ID=mRNA_C-tenellus_contig10479.2.1|Name=mRNA_C-tenellus_contig10479.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3254bp|location=Sequence derived from alignment at C-tenellus_contig10479:1966..5219+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10479:1966..5219+ >mRNA_C-tenellus_contig10479.2.1 ID=mRNA_C-tenellus_contig10479.2.1|Name=mRNA_C-tenellus_contig10479.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=447bp|location=Sequence derived from alignment at C-tenellus_contig10479:1966..5219+ (Choristocarpus tenellus KU2346)back to top |