mRNA_C-tenellus_contig10478.1.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig10478.1.1
Unique NamemRNA_C-tenellus_contig10478.1.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig10478.1.1 vs. uniprot
Match: D7G866_ECTSI (Kinesin motor domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G866_ECTSI)

HSP 1 Score: 407 bits (1046), Expect = 9.310e-132
Identity = 186/220 (84.55%), Postives = 203/220 (92.27%), Query Frame = 1
Query:    1 VAVRCRPFTIDDKLGVHMVQNEEEEGEVNLLNSDYTTNRFAFTYSWWSAYGFDRHVLSNNNEAHAMKLMNQEEVYNSVGLKIKSDLYDGNAVVLFAYGLSGSGKTFTVFGPDAIDIPEAWFKHNQPHPLWGIFPRLAFELFNDKKDGWKITMKYFQNVVDTVRDLLSPVISEQHYKNGMRKDPDGFMDIDWCSNVVLNSWDELRSTFMEANAKKAIAPTQ 660
            VA+RCRPF+IDDKLGV ++QN EEEGEVNLLNSDYTTNRFAFTY+WWSAYGFDRH+ SN +EA AM LMNQE VY+SVG KIK DLYDGNAVVLFAYGLSGSGKTFTVFGPDA+DIPEAWFKH +PHPLWGIFPRLA+E+F DK DGWKITMKYFQNVVDTVRDL+SPVISEQHYKNGM+KD +GFMDIDWC + VLN WDELRS FM+ANAKKAIAPTQ
Sbjct:    7 VAMRCRPFSIDDKLGVQLLQNGEEEGEVNLLNSDYTTNRFAFTYAWWSAYGFDRHIQSNQDEAEAMTLMNQEMVYSSVGTKIKDDLYDGNAVVLFAYGLSGSGKTFTVFGPDAVDIPEAWFKHAEPHPLWGIFPRLAYEMFKDKTDGWKITMKYFQNVVDTVRDLMSPVISEQHYKNGMKKDENGFMDIDWCCSKVLNDWDELRSVFMQANAKKAIAPTQ 226          
BLAST of mRNA_C-tenellus_contig10478.1.1 vs. uniprot
Match: A0A835Z2N0_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2N0_9STRA)

HSP 1 Score: 384 bits (987), Expect = 2.500e-123
Identity = 171/220 (77.73%), Postives = 199/220 (90.45%), Query Frame = 1
Query:    1 VAVRCRPFTIDDKLGVHMVQNEEEEGEVNLLNSDYTTNRFAFTYSWWSAYGFDRHVLSNNNEAHAMKLMNQEEVYNSVGLKIKSDLYDGNAVVLFAYGLSGSGKTFTVFGPDAIDIPEAWFKHNQPHPLWGIFPRLAFELFNDKKDGWKITMKYFQNVVDTVRDLLSPVISEQHYKNGMRKDPDGFMDIDWCSNVVLNSWDELRSTFMEANAKKAIAPTQ 660
            VA+RCRPFTIDDKLGVH++QN +E GE+NLLNSDY+TNRF+F ++WWSAYG+ RH+ SNN E  AM L+NQ++VYN  GLKIK+DL +GNAVVLFAYGLSGSGKTFTVFGPDA DIPEAWFKH++PHPLWGIFPRLA+E+F ++KDGWK+TMKYFQNVVDTVRDLLSP+  E+ YK GMRKDPDGFMDI+WCS+ VLNSWD+LR  FMEANAKKAIAPTQ
Sbjct:    7 VAIRCRPFTIDDKLGVHLLQNSDEAGEINLLNSDYSTNRFSFNWAWWSAYGYQRHIQSNNAEGDAMPLVNQQDVYNQCGLKIKTDLMEGNAVVLFAYGLSGSGKTFTVFGPDAPDIPEAWFKHSEPHPLWGIFPRLAYEIFAERKDGWKVTMKYFQNVVDTVRDLLSPMGEEKQYKAGMRKDPDGFMDIEWCSSKVLNSWDDLRHNFMEANAKKAIAPTQ 226          
BLAST of mRNA_C-tenellus_contig10478.1.1 vs. uniprot
Match: A0A7S3GMP1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GMP1_9STRA)

HSP 1 Score: 358 bits (920), Expect = 8.990e-122
Identity = 163/221 (73.76%), Postives = 186/221 (84.16%), Query Frame = 1
Query:    1 VAVRCRPFTIDDKLGVHMVQNEEEEGEVNLLNSDYTTNRFAFTYSWWSAYGFDRHVLSNN-NEAHAMKLMNQEEVYNSVGLKIKSDLYDGNAVVLFAYGLSGSGKTFTVFGPDAIDIPEAWFKHNQPHPLWGIFPRLAFELFNDKKDGWKITMKYFQNVVDTVRDLLSPVISEQHYKNGMRKDPDGFMDIDWCSNVVLNSWDELRSTFMEANAKKAIAPTQ 660
            VA+RCRPFTIDD LGV + QN EEEGEV L+N DY+T RF FTY+WWSAYG+ RH+  NN  +A  MKL+NQE  Y   GLKIKSDL  GNAVVLFAYGLSGSGKT+TVFGPDA+D PEAWFKH  P PLWGIFPRLA+ELFN+K+DGWKI+MKYFQNVVDTVRDL+SP   EQHYKNGMRKDPDGFMDI+WC   +L++W++LR TF  ANA+KAIAPTQ
Sbjct:   30 VAIRCRPFTIDDSLGVKLQQNGEEEGEVELINCDYSTKRFPFTYAWWSAYGYKRHLTGNNMQDADDMKLVNQEMAYQDCGLKIKSDLLTGNAVVLFAYGLSGSGKTYTVFGPDAVDAPEAWFKHADPQPLWGIFPRLAYELFNEKQDGWKISMKYFQNVVDTVRDLMSPNAEEQHYKNGMRKDPDGFMDIEWCETKILHTWNDLRQTFQLANARKAIAPTQ 250          
BLAST of mRNA_C-tenellus_contig10478.1.1 vs. uniprot
Match: D7G5B6_ECTSI (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5B6_ECTSI)

HSP 1 Score: 369 bits (946), Expect = 3.060e-116
Identity = 168/220 (76.36%), Postives = 192/220 (87.27%), Query Frame = 1
Query:    1 VAVRCRPFTIDDKLGVHMVQNEEEEGEVNLLNSDYTTNRFAFTYSWWSAYGFDRHVLSNNNEAHAMKLMNQEEVYNSVGLKIKSDLYDGNAVVLFAYGLSGSGKTFTVFGPDAIDIPEAWFKHNQPHPLWGIFPRLAFELFNDKKDGWKITMKYFQNVVDTVRDLLSPVISEQHYKNGMRKDPDGFMDIDWCSNVVLNSWDELRSTFMEANAKKAIAPTQ 660
            VAVRCRPFTIDD LGV++ Q+ EEEGE+++LNS Y+T RFAFTY+WWSAYGF RHV +N  EA  M+L++QE+VY SVG KIK+DL  GNAVVLFAYGLSGSGKTFTVFGPDA+D PEAWFKH +PHPLWGIFPRLA+E+F +KKDGWKITMKYFQNVVDTVRDL+SPV  E HYKNGM+KD DGF DIDWCS+ VLNSWD+LR  F  ANA+KAIAPTQ
Sbjct:    7 VAVRCRPFTIDDNLGVNLTQSGEEEGEIDILNSAYSTTRFAFTYAWWSAYGFSRHVKNNATEAAEMELIDQEKVYLSVGKKIKADLLTGNAVVLFAYGLSGSGKTFTVFGPDAVDEPEAWFKHGEPHPLWGIFPRLAYEVFQEKKDGWKITMKYFQNVVDTVRDLMSPVGKEMHYKNGMKKDADGFTDIDWCSSAVLNSWDDLRQAFRAANARKAIAPTQ 226          
BLAST of mRNA_C-tenellus_contig10478.1.1 vs. uniprot
Match: A0A8K1CKD3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CKD3_PYTOL)

HSP 1 Score: 364 bits (934), Expect = 8.770e-116
Identity = 163/220 (74.09%), Postives = 191/220 (86.82%), Query Frame = 1
Query:    1 VAVRCRPFTIDDKLGVHMVQNEEEEGEVNLLNSDYTTNRFAFTYSWWSAYGFDRHVLSNNNEAHAMKLMNQEEVYNSVGLKIKSDLYDGNAVVLFAYGLSGSGKTFTVFGPDAIDIPEAWFKHNQPHPLWGIFPRLAFELFNDKKDGWKITMKYFQNVVDTVRDLLSPVISEQHYKNGMRKDPDGFMDIDWCSNVVLNSWDELRSTFMEANAKKAIAPTQ 660
            V++RCRPFT DD+LGV + QN EEEGEV L+NS Y+T RFAF+Y+WWSAYGF+RHVL +  EA  M L+NQ+  Y+SVGLKIK DL  GNAVVLFAYGLSGSGKTFTVFGPDA+DIPEAWFKH +PHP+WGIFPRLA+ELF DK+DGWK++MKYFQNVVDTVRDL+SPV  EQ YK+GM+KDPDGF DI+WC +VVL  W++LR TFM ANA+KAIAPTQ
Sbjct:    7 VSIRCRPFTCDDQLGVVLSQNGEEEGEVQLINSTYSTTRFAFSYAWWSAYGFERHVLGDPPEAQQMTLINQQMAYDSVGLKIKEDLLGGNAVVLFAYGLSGSGKTFTVFGPDAVDIPEAWFKHEKPHPMWGIFPRLAYELFQDKQDGWKVSMKYFQNVVDTVRDLMSPVAQEQQYKSGMKKDPDGFTDIEWCQSVVLKDWNDLRRTFMAANARKAIAPTQ 226          
BLAST of mRNA_C-tenellus_contig10478.1.1 vs. uniprot
Match: D0N3U6_PHYIT (Kinesin motor domain-containing protein n=17 Tax=Phytophthora TaxID=4783 RepID=D0N3U6_PHYIT)

HSP 1 Score: 355 bits (911), Expect = 6.810e-113
Identity = 160/220 (72.73%), Postives = 188/220 (85.45%), Query Frame = 1
Query:    1 VAVRCRPFTIDDKLGVHMVQNEEEEGEVNLLNSDYTTNRFAFTYSWWSAYGFDRHVLSNNNEAHAMKLMNQEEVYNSVGLKIKSDLYDGNAVVLFAYGLSGSGKTFTVFGPDAIDIPEAWFKHNQPHPLWGIFPRLAFELFNDKKDGWKITMKYFQNVVDTVRDLLSPVISEQHYKNGMRKDPDGFMDIDWCSNVVLNSWDELRSTFMEANAKKAIAPTQ 660
            V++RCRPFT DDKLGV M QN EEEG+V L+NS Y+T RF F+Y+WWSAYG+ RH+  ++ +A  M L++Q+  Y SVG KIK+DL  GNAVVLFAYGLSGSGKTFTVFGPDA+DIPEAWFKH +PHPLWGIFPRLA+ELF +K+DGWKI+MKYFQNVVDTVRDL+SPV  EQ YK+GMRKDPDGF DI+WC +VVL  W++LR TFM ANAKKAIAPTQ
Sbjct:    7 VSIRCRPFTCDDKLGVVMTQNGEEEGDVELINSTYSTTRFPFSYAWWSAYGYKRHIQGDSLQADNMILVDQQMAYESVGRKIKADLMGGNAVVLFAYGLSGSGKTFTVFGPDAVDIPEAWFKHEEPHPLWGIFPRLAYELFKEKQDGWKISMKYFQNVVDTVRDLMSPVAQEQQYKSGMRKDPDGFTDIEWCQSVVLKDWNDLRRTFMVANAKKAIAPTQ 226          
BLAST of mRNA_C-tenellus_contig10478.1.1 vs. uniprot
Match: K3X4F7_GLOUD (Kinesin motor domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X4F7_GLOUD)

HSP 1 Score: 353 bits (906), Expect = 1.830e-112
Identity = 160/220 (72.73%), Postives = 186/220 (84.55%), Query Frame = 1
Query:    1 VAVRCRPFTIDDKLGVHMVQNEEEEGEVNLLNSDYTTNRFAFTYSWWSAYGFDRHVLSNNNEAHAMKLMNQEEVYNSVGLKIKSDLYDGNAVVLFAYGLSGSGKTFTVFGPDAIDIPEAWFKHNQPHPLWGIFPRLAFELFNDKKDGWKITMKYFQNVVDTVRDLLSPVISEQHYKNGMRKDPDGFMDIDWCSNVVLNSWDELRSTFMEANAKKAIAPTQ 660
            V+VRCRPFT DDKLGV + Q+ EEEGEV L+NS Y+T RF F+Y+WWSAYG+ RHV  +  E + M L++Q+  Y+SVGLKIKSDL  GNAVVLFAYGLSGSGKTFTVFGPDA+DIPEAWFKH +P PLWGIFPRLA+ELF +K+DGWKI+MKYFQNVVDTVRDL+SPV  EQ YK+GMRKD DGF DI+WC +VVL  W++LR  FM ANAKKAIAPTQ
Sbjct:    7 VSVRCRPFTCDDKLGVVLTQSAEEEGEVQLINSTYSTTRFGFSYAWWSAYGYQRHVQGDPPEVNQMTLIDQQAAYDSVGLKIKSDLLSGNAVVLFAYGLSGSGKTFTVFGPDAVDIPEAWFKHEEPQPLWGIFPRLAYELFKEKQDGWKISMKYFQNVVDTVRDLMSPVAQEQQYKSGMRKDADGFTDIEWCQSVVLKDWNDLRKNFMAANAKKAIAPTQ 226          
BLAST of mRNA_C-tenellus_contig10478.1.1 vs. uniprot
Match: A0A7S2CQM6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CQM6_9STRA)

HSP 1 Score: 335 bits (860), Expect = 1.090e-111
Identity = 151/220 (68.64%), Postives = 181/220 (82.27%), Query Frame = 1
Query:    1 VAVRCRPFTIDDKLGVHMVQNEEEEGEVNLLNSDYTTNRFAFTYSWWSAYGFDRHVLSNNNEAHAMKLMNQEEVYNSVGLKIKSDLYDGNAVVLFAYGLSGSGKTFTVFGPDAIDIPEAWFKHNQPHPLWGIFPRLAFELFNDKKDGWKITMKYFQNVVDTVRDLLSPVISEQHYKNGMRKDPDGFMDIDWCSNVVLNSWDELRSTFMEANAKKAIAPTQ 660
            VAVRCRP+T DDKLGVHM+QN EEEGE+NLLNSDY+T RFAF+YSWW+A+ +  H  S+ N    M + NQ +V+ ++G KIK++LYDGNA+VLFAYGLSGSGKTFTVFG DA+D P +WF    PH +WG+FP LA+ELF DK+DGWKITMKYFQNVVD VRDL+SP   E+ YK GMRKD DGFMDI+WCS+  LNSWD+LR TF+ ANA+KAIAPTQ
Sbjct:    6 VAVRCRPWTKDDKLGVHMIQNGEEEGEINLLNSDYSTKRFAFSYSWWTAFNWKHHAKSDLNICEDMPITNQTDVFKALGPKIKAELYDGNAIVLFAYGLSGSGKTFTVFGMDAVDNPVSWFHQPTPHDMWGLFPALAYELFQDKQDGWKITMKYFQNVVDIVRDLMSPTGEERMYKEGMRKDQDGFMDIEWCSSAQLNSWDDLRKTFLTANARKAIAPTQ 225          
BLAST of mRNA_C-tenellus_contig10478.1.1 vs. uniprot
Match: A0A5D6XVT6_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XVT6_9STRA)

HSP 1 Score: 360 bits (923), Expect = 2.850e-111
Identity = 163/220 (74.09%), Postives = 187/220 (85.00%), Query Frame = 1
Query:    1 VAVRCRPFTIDDKLGVHMVQNEEEEGEVNLLNSDYTTNRFAFTYSWWSAYGFDRHVLSNNNEAHAMKLMNQEEVYNSVGLKIKSDLYDGNAVVLFAYGLSGSGKTFTVFGPDAIDIPEAWFKHNQPHPLWGIFPRLAFELFNDKKDGWKITMKYFQNVVDTVRDLLSPVISEQHYKNGMRKDPDGFMDIDWCSNVVLNSWDELRSTFMEANAKKAIAPTQ 660
            V+VRCRPFT DDKLGV + Q+ EEEGEV L+NS Y+T RF F+Y+WWSAYGF RHVL N  E + M L++Q+  Y+SVGLKIKSDL  GNAVVLFAYGLSGSGKTFTVFGPDA+DIPEAWFKH +PHPLWGIFPRLA+E+F +K+DGWKI+MKYFQNVVDTVRDL+SPV  EQ YK+GMRKD DGF DI+WC +VVL  W +LR  FM ANAKKAIAPTQ
Sbjct:   55 VSVRCRPFTCDDKLGVVLTQSGEEEGEVQLINSTYSTTRFGFSYAWWSAYGFQRHVLENPPEVNQMTLVDQQSAYDSVGLKIKSDLLSGNAVVLFAYGLSGSGKTFTVFGPDAVDIPEAWFKHEEPHPLWGIFPRLAYEIFKEKQDGWKISMKYFQNVVDTVRDLMSPVAQEQQYKSGMRKDADGFTDIEWCQSVVLKDWKDLRKQFMAANAKKAIAPTQ 274          
BLAST of mRNA_C-tenellus_contig10478.1.1 vs. uniprot
Match: A0A024TQ17_9STRA (Kinesin motor domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TQ17_9STRA)

HSP 1 Score: 351 bits (901), Expect = 3.960e-111
Identity = 158/220 (71.82%), Postives = 183/220 (83.18%), Query Frame = 1
Query:    1 VAVRCRPFTIDDKLGVHMVQNEEEEGEVNLLNSDYTTNRFAFTYSWWSAYGFDRHVLSNNNEAHAMKLMNQEEVYNSVGLKIKSDLYDGNAVVLFAYGLSGSGKTFTVFGPDAIDIPEAWFKHNQPHPLWGIFPRLAFELFNDKKDGWKITMKYFQNVVDTVRDLLSPVISEQHYKNGMRKDPDGFMDIDWCSNVVLNSWDELRSTFMEANAKKAIAPTQ 660
            V +RCRPFTIDD LGV M Q  +EEGEV L+NS Y+T RFAF++SWWSAYG+ RHV  +   A  M L++Q   Y + G KIK+DL  GNAVV+FAYGLSGSGKTFTVFGPDA+DIPEAWFKH +PHP+WGIFPRLA+ELF +K+DGWKITMKYFQNVVDTVRDL+SP+  EQ YKNGMRKDPDGFMDI+WC  VVL  W++LR TFM ANA+KAIAPTQ
Sbjct:    7 VCIRCRPFTIDDTLGVIMTQKGDEEGEVELINSSYSTTRFAFSWSWWSAYGYKRHVKGDTLPADNMLLVDQTMAYEACGSKIKADLLGGNAVVMFAYGLSGSGKTFTVFGPDAVDIPEAWFKHEEPHPMWGIFPRLAYELFKEKQDGWKITMKYFQNVVDTVRDLMSPMAQEQQYKNGMRKDPDGFMDIEWCQGVVLKDWNDLRKTFMSANARKAIAPTQ 226          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10478.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G866_ECTSI9.310e-13284.55Kinesin motor domain-containing protein n=2 Tax=Ec... [more]
A0A835Z2N0_9STRA2.500e-12377.73P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S3GMP1_9STRA8.990e-12273.76Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
D7G5B6_ECTSI3.060e-11676.36Kinesin motor domain-containing protein n=1 Tax=Ec... [more]
A0A8K1CKD3_PYTOL8.770e-11674.09Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
D0N3U6_PHYIT6.810e-11372.73Kinesin motor domain-containing protein n=17 Tax=P... [more]
K3X4F7_GLOUD1.830e-11272.73Kinesin motor domain-containing protein n=1 Tax=Gl... [more]
A0A7S2CQM6_9STRA1.090e-11168.64Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A5D6XVT6_9STRA2.850e-11174.09Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A024TQ17_9STRA3.960e-11171.82Kinesin motor domain-containing protein n=2 Tax=Ap... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig10478contigC-tenellus_contig10478:3016..5083 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7G866
Preferred nameSTARD9
PFAMsAminotran_3,C2,FHA,Kinesin,START
Model size660
Max annot lvl2759|Eukaryota
KEGG koko:K11511,ko:K16491,ko:K17916
KEGG Pathwayko03460,map03460
Hectar predicted targeting categoryother localisation
Exons4
Evalue1.53e-132
EggNOG OGsCOG5059@1|root,KOG0245@2759|Eukaryota
Descriptionmicrotubule motor activity
Cds size660
COG categoryZ
BRITEko00000,ko00001,ko03036,ko03400,ko04812
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789133.7456412-CDS-C-tenellus_contig10478:3015..31951680789133.7456412-CDS-C-tenellus_contig10478:3015..3195Choristocarpus tenellus KU2346CDSC-tenellus_contig10478 3016..3195 +
1680789133.7564049-CDS-C-tenellus_contig10478:3534..37081680789133.7564049-CDS-C-tenellus_contig10478:3534..3708Choristocarpus tenellus KU2346CDSC-tenellus_contig10478 3535..3708 +
1680789133.767078-CDS-C-tenellus_contig10478:3996..41301680789133.767078-CDS-C-tenellus_contig10478:3996..4130Choristocarpus tenellus KU2346CDSC-tenellus_contig10478 3997..4130 +
1680789133.7750218-CDS-C-tenellus_contig10478:4911..50831680789133.7750218-CDS-C-tenellus_contig10478:4911..5083Choristocarpus tenellus KU2346CDSC-tenellus_contig10478 4912..5083 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig10478.1.1prot_C-tenellus_contig10478.1.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig10478 3016..5083 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig10478.1.1

>prot_C-tenellus_contig10478.1.1 ID=prot_C-tenellus_contig10478.1.1|Name=mRNA_C-tenellus_contig10478.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=220bp
VAVRCRPFTIDDKLGVHMVQNEEEEGEVNLLNSDYTTNRFAFTYSWWSAY
GFDRHVLSNNNEAHAMKLMNQEEVYNSVGLKIKSDLYDGNAVVLFAYGLS
GSGKTFTVFGPDAIDIPEAWFKHNQPHPLWGIFPRLAFELFNDKKDGWKI
TMKYFQNVVDTVRDLLSPVISEQHYKNGMRKDPDGFMDIDWCSNVVLNSW
DELRSTFMEANAKKAIAPTQ
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mRNA from alignment at C-tenellus_contig10478:3016..5083+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig10478.1.1 ID=mRNA_C-tenellus_contig10478.1.1|Name=mRNA_C-tenellus_contig10478.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2068bp|location=Sequence derived from alignment at C-tenellus_contig10478:3016..5083+ (Choristocarpus tenellus KU2346)
GTGGCTGTGCGATGCCGGCCCTTCACGATAGATGACAAACTCGGGGTACA CATGGTGCAGAATGAAGAGGAGGAGGGCGAGGTCAATCTGCTTAATTCAG ACTACACCACCAATCGCTTTGCATTCACATACTCCTGGTGGTCTGCCTAT GGCTTTGATCGTCATGTCCTCAGCAACAATGTGTGTTGAGGATGACTATG ATGTAGCTGGAGCCTAGATAGTGTGTCATCTCTATATTCAAGTCTAATTT TTGTGTGTGAATCGAAGGTTCAGTGCAATACCTGCAAATGACTCTACTGT ACTGTGGTTGTAGCCACTACCATTGGCAAAGGCTAAGGTTGTTTTCCTCA GTAGCAATCAATATATATTTACATATGCAGTGGTTCATTTTTCCTTAACG GAGTTTTTTTACAGAGGGTCTATCCCTATCCCAAATTAGTGATACCTTTT GTGTATTTGCATGCACTGACTGGATCTCCTCCAAACCTCTCTGCCATCCT ACTTTTGGTGCATGGTCAGAATGAAGCACACGCAATGAAGCTCATGAACC AGGAGGAAGTGTACAACTCTGTTGGCTTGAAGATCAAGAGTGACCTCTAT GACGGCAATGCTGTGGTCCTCTTTGCTTATGGACTGTCAGGCTCAGGCAA GACCTTCACTGTCTTTGGCCCTGATGCCATTGACATTCCTGAGGTGAGGA ACCTGCCCCTGTTCTGGTTGCTATGATCACCATTCTCTATACTCTTTTTC TGTAGCTGTATTGTGATAAGTGCAAATCAAGACACTCCCTTTTTGTCTGT TCTTCCTGGTAGCCCGTCTCGCAGTTGTTATAATGATGGTGCATGATTAT CTCAATATTCAATTCTTAATATTCAATCTCCCTTTGTTGCTCAGTGTCAT GGCATTTTGAGCAAAAGAGGCATTAGATTTAACCAACGTGCTCCCCCTTC CATATTTTGGAAAACCACATTGTTCTGTCAGGCATGGTTCAAGCACAATC AACCTCACCCCCTGTGGGGAATCTTTCCTCGTTTAGCCTTTGAGCTGTTC AATGACAAGAAAGATGGGTGGAAGATCACCATGAAGTACTTCCAAAACGT AGTGGACACTGTAAGGTATTCGCTTGGAGACACAATTTAAAGACGCAATT TAAAGACACAATTTAAAGAAATTTGGAGGCATCCAGCGCCTTGCAGAACC AAAAAAATGTTCTTGGGGCCTAATAGTGTTGTTCCCTTGATTGATTGATC CATTAAGACTGATGAAGTGCAGTGCATGTTGGCACTACTTGTCCAGTGAT TGTCTGGAGGAAGTAGGGTTCTCCCGCTTGTTTGCTGTGTGTGATGTATC AACATCAAGGTTAGTTGGTGCTAGAACAGATCAACATGCGCAGAAGCTTC TTCTTTCATCTGCCATATACACTCCTGGTGCTTACATTGTTAGGGTTGGG GTTAGAATTGTCCCAAAGTTGCACCCAAGGCTGAAGACTGTAATGTTGTG ATTCCCAGGAAACTAACTGTGTTCTCAGCAAAATATTTCTGCATGCTCTC CAGCATGACTATCACATTCTTTTTCTGATGTTCTGATTGTGTTTTTTTGT ACTGGGATGCCTTACTACCTCTTTCAATGTTTACTTGTTGCCTTTGTTCT GTTTGACCTTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTCCCCAT CCCCCCCCCCCCCCCCCCCCTCTCCCTCCCCCCCCCTCCCCCCCCACCAC ACCGTACAACACACATNNNNNNNNNNTTTTTTTTTTTTTTTGGCGGCTTC TCTCTCTCTTCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTCCCC CCCCCCCCCCCCCCCCCCTTCCTCTTCAAATGCCAATGCTTACCAGGGAC CTTCTGTCACCGGTCATCTCTGAGCAGCACTACAAGAATGGAATGCGAAA GGATCCTGACGGTTTCATGGATATCGATTGGTGTTCCAATGTTGTTCTCA ACAGTTGGGATGAGCTAAGGTCCACATTCATGGAAGCCAATGCAAAGAAG GCGATTGCCCCCACACAG
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Coding sequence (CDS) from alignment at C-tenellus_contig10478:3016..5083+

>mRNA_C-tenellus_contig10478.1.1 ID=mRNA_C-tenellus_contig10478.1.1|Name=mRNA_C-tenellus_contig10478.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=660bp|location=Sequence derived from alignment at C-tenellus_contig10478:3016..5083+ (Choristocarpus tenellus KU2346)
GTGGCTGTGCGATGCCGGCCCTTCACGATAGATGACAAACTCGGGGTACA
CATGGTGCAGAATGAAGAGGAGGAGGGCGAGGTCAATCTGCTTAATTCAG
ACTACACCACCAATCGCTTTGCATTCACATACTCCTGGTGGTCTGCCTAT
GGCTTTGATCGTCATGTCCTCAGCAACAATAATGAAGCACACGCAATGAA
GCTCATGAACCAGGAGGAAGTGTACAACTCTGTTGGCTTGAAGATCAAGA
GTGACCTCTATGACGGCAATGCTGTGGTCCTCTTTGCTTATGGACTGTCA
GGCTCAGGCAAGACCTTCACTGTCTTTGGCCCTGATGCCATTGACATTCC
TGAGGCATGGTTCAAGCACAATCAACCTCACCCCCTGTGGGGAATCTTTC
CTCGTTTAGCCTTTGAGCTGTTCAATGACAAGAAAGATGGGTGGAAGATC
ACCATGAAGTACTTCCAAAACGTAGTGGACACTGTAAGGGACCTTCTGTC
ACCGGTCATCTCTGAGCAGCACTACAAGAATGGAATGCGAAAGGATCCTG
ACGGTTTCATGGATATCGATTGGTGTTCCAATGTTGTTCTCAACAGTTGG
GATGAGCTAAGGTCCACATTCATGGAAGCCAATGCAAAGAAGGCGATTGC
CCCCACACAG
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