mRNA_C-tenellus_contig10447.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10447.1.1 vs. uniprot
Match: A0A7S3UXD3_HETAK (SREBP regulating gene protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXD3_HETAK) HSP 1 Score: 115 bits (288), Expect = 1.590e-24 Identity = 80/263 (30.42%), Postives = 118/263 (44.87%), Query Frame = 2 Query: 761 CKNTVQGRVFLTDSEGNVCRRANLDPTRPGCCAVTTGQSTSPHLSSPMETSHRVTPYAPGRTVHEGSEWGGGKTERYDHVKKINADDPSAADVALQSLRMLPDILSRYSCWGCDVASSCCEVFEFCVSCCMDPSRGPERLAQLQGTNGHGGGDGKKGNGDATHAASYRITWGGAGHGDNGGGFNDESKHKSRGGKKEGEEVFDFCNFKCRTYSGSVSHENTYRGPSKHCFGWLRPPLVPGMSVNSDGLRVAALAKARWKGLPI 1549 C NTVQG F+ DSEG VC RA ++P GCC+ P E + + + S+ GG ++ + + + D+A+ + P L +YSC+ CD S CC+ +E CVSCCMDP+ + L + + +TH G F+FC +KCRT SGSV +EN+YR P K+C+G L P L+PG +VNS+G + + K K +P+ Sbjct: 15 CSNTVQGSKFIADSEGYVCFRAYVNPET-GCCSA----------FYPSEE----------KKIGKLSKTVGGSSQS--DAEDSSPSQTFSKDLAVNFDQTQPQ-LGQYSCFSCDSGSHCCQEYEMCVSCCMDPAN-RDVLEKFKS--------------QSTHFVYQHTPLG-----------------------------FEFCRYKCRTSSGSVQNENSYRNPVKYCYGELLPELIPGSTVNSNGDTLNVMVKWGQKEVPM 209
BLAST of mRNA_C-tenellus_contig10447.1.1 vs. uniprot
Match: A0A6H5L6Q5_9PHAE (SREBP regulating gene protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6Q5_9PHAE) HSP 1 Score: 91.3 bits (225), Expect = 9.930e-16 Identity = 106/392 (27.04%), Postives = 137/392 (34.95%), Query Frame = 2 Query: 560 DSLPSAFLIDR-VGGVLGENLSPRWAQQAGSGRKNLGDHTPDVGDQLKQGKVYLRNEGRGEWDGGRKRCKNTVQGRVFLTDSEGNVCRRANLDPT---------RPGCCAVTTGQSTSPHLSSPMET---------------SHRVTPYAPG------RTVHEGSEWGGGKTERYDHVKKINADDPSAADVALQSLRMLPDILSRYSCWGCDVASS-----------------CCEVFEFCVSCCMDPSRGPERLAQLQGTNGHGGGDGKK-----GNGDATHA----------ASYRITWGGAGHGDNGGGFNDESKHKSRGGKKEGEEVFDFCNFKCRTYSGSVSHENTYRGPSKHCFGWLRPPLVPGMSVNSDGLRVAALAKARWKGLP 1546 D++PS L++R G+ P A++A S L D T V G EGR E RC+NTVQG + DSEG VC RA L RPG H+ P AP RT GG E + + + + + +SCW CDV +EFCVSCC +P RG ER A +Q + G + GN DA++ AS+ G E + + E F C F+CRTYSGSV HEN+YR P KHCFG RPP + G R + +G P Sbjct: 161 DAIPSVLLVERGPSGLPSGPALPGGARKASS----LVDVTGAVLGDGGGGGEIRGGEGR-ENSSNPYRCRNTVQGATLVADSEGRVCHRAELIVEEGDDXXVRHRPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKHKHPPAAPHSGPATTRTETRRGVEGGVSVELVELGELAHGXXXXXXXXXXXXFPPEEALSTPFSCWSCDVGEDGPSGNXXXXXXXXXXXXXXSSYEFCVSCCQNPQRGKEREA-IQASAALSGHPAYRDLLGPGNNDASNRRELPPPRQLQASHAAAEAGV-----------EKSQEEAEERDAREMAFAHCAFRCRTYSGSVVHENSYRSPLKHCFGRFRPPAASAAAAALPGGRAGVVEGRESRGAP 535
BLAST of mRNA_C-tenellus_contig10447.1.1 vs. uniprot
Match: D7FXG4_ECTSI (SREBP regulating gene protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXG4_ECTSI) HSP 1 Score: 90.5 bits (223), Expect = 1.760e-15 Identity = 69/197 (35.03%), Postives = 85/197 (43.15%), Query Frame = 2 Query: 1082 YSCWGCDVA-----------------SSCCEVFEFCVSCCMDPSRGPERLAQLQGT---NGH-------GGGDGKKGNGDATHAASYRITWGGAGHGDNGGGFNDESKHKSRGGKKEGEEVFDFCNFKCRTYSGSVSHENTYRGPSKHCFGWLRPPLVPGMSVNSDGLRVAALAKARWKGLPIPL*LPPTPVLLALA 1591 +SCW CDV SSCC +EFCVSCC +P RG ER A +Q + +GH G G+ NG GG + + E F C F+CRTYSGSV+HEN+YR P KHCFG RPP + G + +G P PL L P+L ALA Sbjct: 359 FSCWSCDVGEDGPSGSNGGGNDSPSFSSCCSSYEFCVSCCQNPQRGEEREA-IQASAALSGHPAYRDLLGSGNNDAANGREPXXXXXXXXXXXXXEA---GGVEKNGQQVEAEERDARELAFAHCAFRCRTYSGSVAHENSYRSPLKHCFGRFRPPAASAAAAALPGGWGGVVEGGESRGAP-PLQL--DPLLFALA 548
BLAST of mRNA_C-tenellus_contig10447.1.1 vs. uniprot
Match: A0A8J2SKL4_9STRA (SREBP regulating gene protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SKL4_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 1.870e-10 Identity = 44/141 (31.21%), Postives = 62/141 (43.97%), Query Frame = 2 Query: 1106 ASSCCEVFEFCVSCCMDPSRGPERLAQLQGTNGHGGGDGKKGNGDATHAASYRITWGGAGHGDNGGGFNDESKHKSRGGKKEGEEVFDFCNFKCRTYSGSVSHENTYRGPS-KHCFGWLRPPLVPGMSVNSDGLRVAALAK 1525 ASSCC+ +E CV+CC+ P +R R+ KH KE + F+ C F+C T SGS H+N+YR + +HCFG +RPPL P MS+NSD + +L + Sbjct: 100 ASSCCDTYENCVACCVRPRNVEQR----------------------------RLV----------------RKHAVHAVLKEAADDFELCRFRCLTNSGSTLHQNSYRSATERHCFGTVRPPLDPRMSINSDTETLQSLTR 196
BLAST of mRNA_C-tenellus_contig10447.1.1 vs. uniprot
Match: UPI00038C274C (UPF0454 protein C12orf49 homolog n=3 Tax=Arvicolinae TaxID=39087 RepID=UPI00038C274C) HSP 1 Score: 70.9 bits (172), Expect = 2.290e-10 Identity = 65/242 (26.86%), Postives = 85/242 (35.12%), Query Frame = 2 Query: 761 CKNTVQGRVFLTDSEGNVCRRANLDPTRPGCCAVTTGQSTSPHLSSPMETSHRVTPYAPGRTVHEGSEWGGGKTERYDHVKKINADDPSAADVALQSLRMLPDILSRYSCWGCDVASSCCEVFEFCVSCCMDPSRGP--ERLAQLQGTNGHGGGDGKKGNGDATHAASYRITWGGAGHGDNGGGFNDESKHKSRGGKKEGEEVFDFCNFKCRTYSGSVSHENTYRGP-SKHCFGWLRPPLVP 1477 C+N+VQG+ FLTD G VC R NL GCC DV + S + +Y C GC + S CCEV+E+CVSCC+ PS+ P ER A +++ + E+ F+ C KCRT S SV HENTYR P +K+C+G P L P Sbjct: 75 CRNSVQGKEFLTDELGYVCERKNLLAN--GCC-----------------------------------------------------------DVKVPSTK-------QYCCEGC-LVSGCCEVYEYCVSCCLQPSKQPLLERFLNRA-------------------AVAFQNLF------------------------MAVEDHFELCLAKCRTSSQSVQHENTYRDPIAKYCYGESPPVLFP 204
BLAST of mRNA_C-tenellus_contig10447.1.1 vs. uniprot
Match: UPI000C874C14 (uncharacterized protein LOC120261293 n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI000C874C14) HSP 1 Score: 69.3 bits (168), Expect = 2.270e-9 Identity = 49/166 (29.52%), Postives = 70/166 (42.17%), Query Frame = 2 Query: 1055 RMLPDILSRYSCWGCDVASSCCEVFEFCVSCCMDPSRGPERLAQLQGTNGHGGGDGKKGNGDATHAASYRITWGGAGHGDNGGGFNDESKHKSRGGKKEGEEVFDFCNFKCRTYSGSVSHENTYRGPSKHCFGWLRPPLVPGMSVNSDGLRVAAL-AKARWKGLPI 1549 R P+ ++SC GC++ S CC +E+CVSCC++PS+ E LA +I +K ++ G VFDFC +CR S SV HEN Y S HCF S++S+ R+ L + AR G+ I Sbjct: 71 RCCPEAGEQFSCQGCNLVSRCCNSYEYCVSCCLNPSKTQEELA-----------------------VKVKI-----------------AKQETAGTYSS---VFDFCAGRCRHNSASVVHENAYASDSHHCF-----------SLDSNSTRITRLNSPARLAGIDI 182
BLAST of mRNA_C-tenellus_contig10447.1.1 vs. uniprot
Match: A0A7S2ZMH0_9RHOD (SREBP regulating gene protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZMH0_9RHOD) HSP 1 Score: 68.6 bits (166), Expect = 2.730e-9 Identity = 40/142 (28.17%), Postives = 55/142 (38.73%), Query Frame = 2 Query: 1079 RYSCWGCDVASSCCEVFEFCVSCCMDPSRGPERLAQLQGTNGHGGGDGKKGNGDATHAASYRITWGGAGHGDNGGGFNDESKHKSRGGKKEGEEVFDFCNFKCRTYSGSVSHENTYRGPSKHCFGWLRPPLVPGMSVNSDGL 1504 RY C GC AS CCE FEFCVSCC+ E++ ++ Y + + F+ C C+++SGSV HEN+YR P HC+ RPP + + GL Sbjct: 132 RYICTGCQRASHCCEHFEFCVSCCLSKESPSEQIRNME------------------RLKIYDLA---------------------------SSDTFEVCAVACKSHSGSVLHENSYRSPYHHCYEEERPPTMGPQGGPTSGL 228
BLAST of mRNA_C-tenellus_contig10447.1.1 vs. uniprot
Match: A0A0K9R892_SPIOL (SREBP regulating gene protein n=1 Tax=Spinacia oleracea TaxID=3562 RepID=A0A0K9R892_SPIOL) HSP 1 Score: 68.2 bits (165), Expect = 5.150e-9 Identity = 49/156 (31.41%), Postives = 62/156 (39.74%), Query Frame = 2 Query: 1055 RMLPDILSRYSCWGCDVASSCCEVFEFCVSCCMDPSRGPERLAQLQGTNGHGGGDGKKGNGDATHAASYRITWGGAGHGDNGGGFNDESKHKSRGGKKEGEEVFDFCNFKCRTYSGSVSHENTYRGPSKHCFGWLRPPLVPGMSVNSDGLRVAALA 1522 R P +YSC GC++ S CC +EFCVSCC++P + + LA K A +A +Y VFDFC +CR SGSV HEN Y HCF L S +SD L + LA Sbjct: 65 RCCPQKRGQYSCQGCNLISQCCNSYEFCVSCCLNPLQTQKELAI------------KTKIAKAENAGTYNS-------------------------------VFDFCAGRCRHNSGSVVHENAYLSDFHHCFS-----LPSNSSGSSDTLMESRLA 172
BLAST of mRNA_C-tenellus_contig10447.1.1 vs. uniprot
Match: A0A1U8H4F0_CAPAN (SREBP regulating gene protein n=4 Tax=Capsicum TaxID=4071 RepID=A0A1U8H4F0_CAPAN) HSP 1 Score: 67.4 bits (163), Expect = 1.060e-8 Identity = 46/142 (32.39%), Postives = 59/142 (41.55%), Query Frame = 2 Query: 1073 LSRYSCWGCDVASSCCEVFEFCVSCCMDPSRGPERLAQLQGTNGHGGGDGKKGNGDATHAASYRITWGGAGHGDNGGGFNDESKHKSRGGKKEGEEVFDFCNFKCRTYSGSVSHENTYRGPSKHCFGWLRPPLVPGMSVNSD 1498 L RYSC GC++ S CC +EFCVSCC++PSR + LA + +I SK + G +FDFC +CR S SV HEN Y HCF +P S +SD Sbjct: 81 LDRYSCHGCNLVSQCCNSYEFCVSCCLNPSRTQKNLA-----------------------LNVKI-----------------SKPITAGTYSS---IFDFCTGRCRHNSESVVHENAYLSEFHHCFS------IPFNSSSSD 173
BLAST of mRNA_C-tenellus_contig10447.1.1 vs. uniprot
Match: A0A0K9P5Y3_ZOSMR (SREBP regulating gene protein n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9P5Y3_ZOSMR) HSP 1 Score: 67.0 bits (162), Expect = 1.360e-8 Identity = 47/167 (28.14%), Postives = 69/167 (41.32%), Query Frame = 2 Query: 1049 SLRMLPDILSRYSCWGCDVASSCCEVFEFCVSCCMDPSRGPERLAQLQGTNGHGGGDGKKGNGDATHAASYRITWGGAGHGDNGGGFNDESKHKSRGGKKEGEEVFDFCNFKCRTYSGSVSHENTYRGPSKHCFGWLRPPLVPGMSVNSDGLRVAALAKARWKGLPI 1549 S R P+ ++SC GC++ S CC+ +E+CVSCC++P R E+LA + +T + + S VFDFC +CR S +V HENTY HCF + NS G+ L++ R G+ I Sbjct: 70 SSRCCPEYGKQFSCQGCNLVSECCDTYEYCVSCCLNPQRTSEKLA-------------------LNVKIAKPVT---------------SANYAS---------VFDFCAGRCRHNSANVVHENTYSSDFHHCFS---------LQSNSSGV-TEFLSETRLTGISI 183 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10447.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10447.1.1 >prot_C-tenellus_contig10447.1.1 ID=prot_C-tenellus_contig10447.1.1|Name=mRNA_C-tenellus_contig10447.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=460bp MVLDEPQGPTGARRFEPNQDVENGVSSGPLQRRHPHTFSALTMPDRSSNDback to top mRNA from alignment at C-tenellus_contig10447:3835..5510+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10447.1.1 ID=mRNA_C-tenellus_contig10447.1.1|Name=mRNA_C-tenellus_contig10447.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1676bp|location=Sequence derived from alignment at C-tenellus_contig10447:3835..5510+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10447:3835..5510+ >mRNA_C-tenellus_contig10447.1.1 ID=mRNA_C-tenellus_contig10447.1.1|Name=mRNA_C-tenellus_contig10447.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=1380bp|location=Sequence derived from alignment at C-tenellus_contig10447:3835..5510+ (Choristocarpus tenellus KU2346)back to top |