mRNA_C-tenellus_contig10423.1.2 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10423.1.2 vs. uniprot
Match: A0A7S1D394_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D394_CYCTE) HSP 1 Score: 183 bits (464), Expect = 3.730e-49 Identity = 112/279 (40.14%), Postives = 162/279 (58.06%), Query Frame = 1 Query: 253 ASPTTQKRLKQGPSGVIS-CLAYSACSISMVLGNKALAT-----YGVDVHLLPVVFQCFFAMVMTKLLSAVGIPGLHAEAMNLKTAVSWLPINVLFCSMLFTSFMALKWIEIPMFQVFKTSTVVWVTILEFLLFGGKVNAHCCAALTLIVVGAAGTVVTGIDLRNGW-GLFWMVANVFSTASYIIYLKFATRFIKLSRLGMVKYNNTLGVLLLAPAVLAKGEVSSLLESGALKSWQYVGLNLLVGVVGFGINLVALWCIECTSASTYSITGNLSKVHIA 1068 A PT + + V S C+ YS CS+SMVL NK+LA+ D+++L VVFQ A+ +L + + N++TA W P+NVLFC MLFT +L++ +PM +FK T + VT ++ FG V + A +++ GA D+ W GLFWM AN +TA YI+Y+KFAT+ +KLS+ GMV YNN L L L PA + +GEV+ LLE+ A+ +W Y NL G +GF +N +L C+ T +TY+I G+L+KV +A Sbjct: 25 AKPTVAAAAQVASAKVASACMMYSFCSVSMVLTNKSLASSYNQLIDGDLNVLLVVFQAITAVGCVELCKR--LKWVEYPNFNMRTAKLWAPVNVLFCLMLFTGMASLQFNSVPMVTIFKNITNIVVTCGDYYFFGTSVESLVAMAFAVMLGGAIAA--AWHDIYITWVGLFWMCANCLATAGYILYMKFATKNVKLSKFGMVFYNNVLCTLFLLPASIFRGEVTLLLETEAIHTWDYFFKNLFAGFIGFFLNFASLNCVAATGPTTYAIVGSLNKVPVA 299
BLAST of mRNA_C-tenellus_contig10423.1.2 vs. uniprot
Match: A0A1Z5JIF2_FISSO (GDP-mannose transporter n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JIF2_FISSO) HSP 1 Score: 182 bits (461), Expect = 1.440e-48 Identity = 115/324 (35.49%), Postives = 175/324 (54.01%), Query Frame = 1 Query: 256 SPTTQKRLKQGP-------SGVISCLAYSACSISMVLGNKALAT---YGVD--VHLLPVVFQCFFAMV---MTKLLSAVGIPGLHAEAMNLKTAVSWLPINVLFCSMLFTSFMALKWIEIPMFQVFKTSTVVWVTILEFLLFGGKVNAHCCAALTLIVVGAAGTVVTGIDLRNGWGLFWMVANVFSTASYIIYLKFATRFIKLSRLGMVKYNNTLGVLLLAPAVLAKGEVSSLLESGALKSWQYVGLNLLVGVVGFGINLVALWCIECTSASTYSITGNLSKVHIARARVPGESILKRVRVFCPVLSKKNWAWVAAGFLRHFTY 1182 +P T K +KQ + SC YS CS+SM+L NK+LA+ + +D +++L VVFQ A V + +++ V P L+ E TA +W P+NV FC MLFT ++L+ +PM VFK T + T +++ FG + AA ++ +GA I + GLFWMVAN +T+SY++Y+KFAT+ IKLS+ GMV NN L V LL P GE+++ L + + +W Y G N G +GF +N +L C+ T STY+I G+L+K+ +A + +F V+ K W +++ F Y Sbjct: 33 APLTTKDVKQTSLVSSGSIKAIASCTFYSFCSVSMILVNKSLASSYNHLIDGNLNVLLVVFQAIIAAVSVEVCRMMHWVQYPPLNWE-----TARAWAPVNVFFCLMLFTGMVSLETNSVPMVTVFKNVTNIITTAGDYIFFGSQPEGLAMAAFAVMFLGAVAAAQNDIHV-TATGLFWMVANCLATSSYVLYMKFATQNIKLSKFGMVFVNNVLCVALLLPVAFLNGELATFLNAEQVHTWDYAGKNAFAGFIGFFLNFASLHCVSVTGPSTYAIVGSLNKIPVA---------ILGYLIFDSVIDSKTWFFISVSLCGGFLY 341
BLAST of mRNA_C-tenellus_contig10423.1.2 vs. uniprot
Match: A0A6H5L2R8_9PHAE (TPT domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2R8_9PHAE) HSP 1 Score: 182 bits (461), Expect = 6.800e-48 Identity = 112/325 (34.46%), Postives = 179/325 (55.08%), Query Frame = 1 Query: 259 PTTQKRLKQGPSGVISCLAYSACSISMVLGNKALAT-YGVDVHLLPVVFQCFFAMVMTKLLSAVGIPGLHAEAMNLKTAVSWLPINVLFCSMLFTSFMALKWIEIPMFQVFKTSTVVWVTILEFLLFGGKVNAHCCAALTLIVVGAAGTVVTG-------IDLR-NGWGLFWMVANVFSTASYIIYLKFATRFIKLSRLGMVKYNNTLGVLLLAPAVLAKGEVSSL--------LESGALKSWQYVGLNLLVGVVGFGINLVALWCIECTSASTYSITGNLSKVHIARARVPGESILKRVRVFCPVLSKKNWAWVAAGFLRHFTY 1182 P K++ + + + SC A S SISM+L NKALA + ++H LP+ FQCF A+++ + G+ + E N+ TA+ W PI + FC+ML +SF++++++ +PM VFK+ T ++ G H A L+++ A V+TG D+ + WG FWM AN F+TASY++ +KFATR +KL + GMV YNN LG L++ P + GEV +L L+ L + Y+G+NL G GF +N ALWC+ TSA+TY++ ++ ++ + G +L R+ S + W ++ + F Y Sbjct: 71 PGGGKKMGEVANAIASCAALSFFSISMILANKALAVLFNANLHFLPMAFQCFIAVLLVEASRMKGL--VQYEPFNMATAMRWFPIAIFFCTMLLSSFLSMQYMGVPMVTVFKSLT-------NLIIVAGDYFWHSQVATPLVLLSLA--VMTGGAILASWSDIEFSAWGYFWMSANCFATASYVLTMKFATRTMKLPKFGMVFYNNLLGCLIMLPLAVCFGEVFTLESTSLVGFLDRADLHTPTYLGINLGAGAAGFFLNFAALWCVSATSATTYAVVNTVNNFPVS---ILGYYLLPGARI-----SHQQWEFIVVNIVGGFIY 376
BLAST of mRNA_C-tenellus_contig10423.1.2 vs. uniprot
Match: K0S0P0_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S0P0_THAOC) HSP 1 Score: 179 bits (453), Expect = 1.540e-47 Identity = 119/316 (37.66%), Postives = 170/316 (53.80%), Query Frame = 1 Query: 259 PTTQKRLKQGPSG----------VISCLAYSACSISMVLGNKALATY--GV-DVHLLPVVFQCFFAMVMTKLLSAVGIPGLHAEAMNLKTAVSWLPINVLFCSMLFTSFMALKWIEIPMFQVFKTSTVVWVTILEFLLFGGKVNAHCCAALTLIVVGAAGTVVTGIDLRNGWGLFWMVANVFSTASYIIYLKFATRFIKLSRLGMVKYNNTLGVLLLAPAVLAKGEVSSLLESGALKSWQYVGLNLLVGVVGFGINLVALWCIECTSASTYSITGNLSKVHIARARVPGESILKRVRVFCPVLSKKNWAWVAAGFL 1167 P + +GPSG +I+ YS CS+ M+L NK LA+ G+ D+++L VVFQ AMV + +G + A +L TA SW P+NVLFC MLFT +L+ +PM VFK T + T+ + +L+G +V+ AA +++ GA + GLFWMVAN T+ Y++YLKFATR ++LS+ GMV YNN L VL L P L G++ L AL + Y N L G VGF +N +L CI +TY++ G+L+KV IA + R +F V+S + W + G L Sbjct: 29 PGRMEASPRGPSGDAEQSSASKSLIASAMYSGCSVGMLLVNKNLASSYNGLKDLYILLVVFQAIAAMVCVEFSKHMG--WVDYPAFHLSTARSWAPVNVLFCGMLFTGMASLEHNSVPMVTVFKNITNIMTTLGDCILYGARVDFPVLAAFGIMLAGAVMMAASNSAGVTQTGLFWMVANCLCTSGYVLYLKFATRSVRLSKFGMVFYNNVLCVLFLFPVTLVNGQLGKFLGKKALHTADYAVKNALAGFVGFFLNFASLKCIAQAGPTTYAMLGSLNKVPIA---------IFRYLIFDNVISGETWFILMGGIL 333
BLAST of mRNA_C-tenellus_contig10423.1.2 vs. uniprot
Match: A0A7S2SW66_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SW66_9STRA) HSP 1 Score: 176 bits (446), Expect = 6.410e-47 Identity = 101/261 (38.70%), Postives = 160/261 (61.30%), Query Frame = 1 Query: 292 SGVISCLAYSACSISMVLGNKALAT-YGVDVHLLPVVFQCFFAMVMTKLLSAVGIPGLHAEAMNLKTAVSWLPINVLFCSMLFTSFMALKWIEIPMFQVFKTSTVVWVTILEFLLFGGKVNAHCCAALTLIVVGAAGTVVTGIDLRNGWGLFWMVANVFSTASYIIYLKFATRFIKLSRLGMVKYNNTLGVLLLAPAVLAKGEVSSLLES-GALKSWQYVGLNLLVGVVGFGINLVALWCIECTSASTYSITGNLSKVHIA 1068 S ++SCLAYS CSI+MVL NKALA + VD+ +L VV QC FA+++ + +GI + + A+ WLP+N+ F ML TSF + K++ +P+ VFK T + + ++ G ++ AA ++VVGA + L + G WM+ N STASY++Y+K AT+ + +S+ GMV YNN L V LL P GEV + L + + S ++ +N++ G +GF +NL +LWC+ TSA+TY++ G+++K+ +A Sbjct: 18 SQLLSCLAYSLCSITMVLSNKALAAVFHVDIPVLLVVMQCSFAVLLVEASRIMGI--VSYQPFQSSVALRWLPVNLCFVVMLMTSFRSFKFLNVPIITVFKNLTNILIVAGDWYWHGQRITLGIIAAFGVMVVGAVFAAKNDV-LFSFEGYCWMLGNCLSTASYVLYMKTATKSVDISKFGMVFYNNLLSVPLLLPLAFGLGEVDTALANLDIITSLNFLFVNIVAGSMGFFLNLASLWCVSATSATTYALVGSVNKIPVA 275
BLAST of mRNA_C-tenellus_contig10423.1.2 vs. uniprot
Match: A0A4D9DFY1_9STRA (EamA domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DFY1_9STRA) HSP 1 Score: 174 bits (440), Expect = 3.220e-45 Identity = 95/258 (36.82%), Postives = 150/258 (58.14%), Query Frame = 1 Query: 298 VISCLAYSACSISMVLGNKALAT-YGVDVHLLPVVFQCFFAMVMTKLLSAVGIPGLHAEAMNLKTAVSWLPINVLFCSMLFTSFMALKWIEIPMFQVFKTSTVVWVTILEFLLFGGKVNAHCCAALTLIVVGAAGTVVTGIDLRNGWGLFWMVANVFSTASYIIYLKFATRFIKLSRLGMVKYNNTLGVLLLAPAVLAKGEVSSLLESGALKSWQYVGLNLLVGVVGFGINLVALWCIECTSASTYSITGNLSKVHIA 1068 +ISC AY+ CSI+MVL NKALA+ Y D+ L + FQ A+V+ +G + + A+ WLP+N+ F SML T F++L+++ +PM +FK T V + E+ L+G V+ A ++++GA I +G G FWM++N A Y++Y+K AT+ ++L + MV YNN L + +L +GE ++ S L + YV L+L G+VGF +NL LWC+ SA+TYS+ G ++K+ +A Sbjct: 92 IISCFAYTFCSITMVLTNKALASQYDADIDFLVIAFQSLCAVVLVLTCDTLGFIQHGSTKFDPGVALQWLPVNLFFVSMLSTGFLSLRYLNVPMVTIFKNLTNVGIMWGEWSLYGAHVSLGAILACAIMILGAVLAAANDITF-SGIGYFWMLSNCVCCAGYVLYMKHATKTVRLPKFAMVFYNNLLSLPILLAGAAVRGEYTTFFWSEDLHTAAYVSLSLYAGLVGFALNLATLWCVSNNSATTYSVVGAMNKIPLA 348
BLAST of mRNA_C-tenellus_contig10423.1.2 vs. uniprot
Match: A0A7S2R176_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R176_9STRA) HSP 1 Score: 170 bits (430), Expect = 3.000e-44 Identity = 95/262 (36.26%), Postives = 155/262 (59.16%), Query Frame = 1 Query: 298 VISCLAYSACSISMVLGNKALAT-----YGVDVHLLPVVFQCFFAMVMTKLLSAVGIPGLHAEAMNLKTAVSWLPINVLFCSMLFTSFMALKWIEIPMFQVFKTSTVVWVTILEFLLFGGKVNAHCCAALTLIVVGAAGTVVTGIDLR-NGWGLFWMVANVFSTASYIIYLKFATRFIKLSRLGMVKYNNTLGVLLLAPAVLAKGEVSSLLESGALKSWQYVGLNLLVGVVGFGINLVALWCIECTSASTYSITGNLSKVHI 1065 ++SC Y CSISMVL NK+LA+ D+++L VVFQ A++ + + + + N++TA W P+N++FC MLFT +L+ +PM +FK T ++ + ++ FG V+ + +++++GA + G D N G+FWM++N F+TA YI+Y+K+AT+ +KL++ GMV YNN L +L L P GE+ + L + A+ S+ Y N G VGF +N +L C+ T +TY+I G+L+K+ I Sbjct: 44 ILSCALYCFCSISMVLVNKSLASSYNDLIQGDLNVLLVVFQAIIAVIAVE--TCKKMKWVEYPTFNMRTARQWAPVNIMFCLMLFTGMASLQVNSVPMVTIFKNITNIFCSFGDYYFFGSTVDRFVILSFSVMLLGAL--LAAGSDFEMNPVGIFWMISNCFATAGYILYMKYATKNVKLTKFGMVFYNNVLCILFLLPVATINGELLTFLRTNAIHSFDYFWKNGFAGFVGFFLNFASLNCVANTGPTTYAIVGSLNKIPI 301
BLAST of mRNA_C-tenellus_contig10423.1.2 vs. uniprot
Match: A0A7S1ZAE0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZAE0_9STRA) HSP 1 Score: 168 bits (426), Expect = 1.290e-43 Identity = 102/300 (34.00%), Postives = 164/300 (54.67%), Query Frame = 1 Query: 298 VISCLAYSACSISMVLGNKALAT-----YGVDVHLLPVVFQCFFAMVMTKLLSAVGIPGLHAEAMNLKTAVSWLPINVLFCSMLFTSFMALKWIEIPMFQVFKTSTVVWVTILEFLLFGGKVNAHCCAALTLIVVGAAGTVVTGIDLRNGWGLFWMVANVFSTASYIIYLKFATRFIKLSRLGMVKYNNTLGVLLLAPAVLAKGEVSSLLESGALKSWQYVGLNLLVGVVGFGINLVALWCIECTSASTYSITGNLSKVHIARARVPGESILKRVRVFCPVLSKKNWAWVAAGFLRHFTY 1182 +++C YS CS+SM+L NK+LA+ + +++ VV Q A++ ++ + + + + N++TA W P+N+ FC+MLFT +L++ +PM VFK V VT + FG +V A+ L++ GA + G+FWM ANV STA YI+Y+KFAT+ +KLS+ GMV YNN L + L P ++ GE++ + + AL S Y N G VGF +N +L C+ T +TY+ G L+K+ I S+L V +F +++ + W ++ L F Y Sbjct: 51 LMACTMYSGCSVSMILVNKSLASSYNHLFDGSLNVFLVVVQAVVAVICVEICKKMKL--VEYPSFNMQTAKLWAPVNIFFCAMLFTGMASLQYNSVPMVSVFKNINNVVVTFGDRYFFGVRVEPLILASFLLMLGGAVAAASNDLQASPA-GIFWMSANVVSTAGYILYMKFATKNVKLSKFGMVFYNNVLCTVFLLPVIILNGEMNIFMNTEALHSVDYFVKNFFSGFVGFFLNFASLNCVAATGPTTYATVGTLNKIPI--------SLLGYV-LFDDIITAQTWMYITVSMLGGFLY 338
BLAST of mRNA_C-tenellus_contig10423.1.2 vs. uniprot
Match: K0R1P0_THAOC (TPT domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R1P0_THAOC) HSP 1 Score: 176 bits (447), Expect = 1.860e-43 Identity = 114/324 (35.19%), Postives = 173/324 (53.40%), Query Frame = 1 Query: 256 SPTTQKRLKQGPSG----------VISCLAYSACSISMVLGNKALAT-----YGVDVHLLPVVFQCFFAMVMTKLLSAVGIPGLHAEAMNLKTAVSWLPINVLFCSMLFTSFMALKWIEIPMFQVFKTSTVVWVTILEFLLFGGKVNAHCCAALTLIVVGAAGTVVTGIDLRNGWGLFWMVANVFSTASYIIYLKFATRFIKLSRLGMVKYNNTLGVLLLAPAVLAKGEVSSLLESGALKSWQYVGLNLLVGVVGFGINLVALWCIECTSASTYSITGNLSKVHIARARVPGESILKRVRVFCPVLSKKNWAWVAAGFLRHFTY 1182 SP + +GPSG +I+ YS CS+ MVL NK+LA+ D+++L VVFQ A+V + S+ + + A NL TA SW P+N+LFC MLFT +L+ +PM VFK T + T+ + +L+G V+ AA +++ GA D+ GLFWM+AN T+ Y++YLKFAT+ +KLS+ GMV YNN L +L L P L G++ L + AL + Y N G VGF +N +L C+ T +TY++ G+L+KV IA + +F +S++ W +++ + Y Sbjct: 68 SPGRMEASPRGPSGDAEQSSASKSLIASAMYSGCSVGMVLVNKSLASSYNHLIEGDLNILLVVFQAIAAVVCVE--SSKHMGWVDYPAFNLSTARSWAPVNILFCGMLFTGMASLEHNSVPMVTVFKNITNIMTTLGDCILYGASVDFLVLAAFGIMLAGAVMAARNSADVTQT-GLFWMLANCLCTSGYVLYLKFATKSVKLSKFGMVFYNNVLCMLFLFPVTLVNGQLGKFLGTKALHTADYAVKNAFAGFVGFFLNFASLNCVAQTGPTTYAMLGSLNKVPIA---------IFGYLIFDNAISEETWTFISISLMGGILY 379
BLAST of mRNA_C-tenellus_contig10423.1.2 vs. uniprot
Match: D8LTL4_ECTSI (TPT domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTL4_ECTSI) HSP 1 Score: 168 bits (425), Expect = 2.220e-43 Identity = 100/258 (38.76%), Postives = 148/258 (57.36%), Query Frame = 1 Query: 298 VISCLAYSACSISMVLGNKALA-TYGVDVHLLPVVFQCFFAMVMTKLLSAVGIPGLHAEAMNLKTAVSWLPINVLFCSMLFTSFMALKWIEIPMFQVFKTSTVVWVTILEFLLFGGKVNAHCCAALTLIVVGAAGTVVTGIDLRNGWGLFWMVANVFSTASYIIYLKFATRFIKLSRLGMVKYNNTLGVLLLAPAVLAKGEVSSLLESGALKSWQYVGLNLLVGVVGFGINLVALWCIECTSASTYSITGNLSKVHIA 1068 V S L+YS CS+SMV+ NK LA TY D+ L VV QC A ++ + + +G + N TA WLP+++ F +MLFTSF AL+ + +PM VFK T + + ++ F + ++ ++V GA +D N WG FWMVAN +TA Y++Y+K AT+ IKL R GMV YNN L LL PA G+ + + L++ Y+ L GVVG +N +LWC+ TSA+TY++ G+++ + A Sbjct: 27 VSSSLSYSFCSVSMVMSNKLLAFTYKSDMAFLVVVGQCLVATILVEAVRRMGYASY--DPFNFSTARRWLPVSICFSAMLFTSFKALEVMNVPMVTVFKNLTNIVIVTGDWWFFQQAASWLVMFSMAVMVFGALFASYNDLDF-NPWGYFWMVANCCTTAGYVLYMKHATKSIKLPRFGMVFYNNLLTTCLLTPAAFMMGDFTIFWTTPQLRTVTYMTALLFSGVVGVLLNFASLWCVGATSATTYAVVGSVNVIPTA 281 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10423.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10423.1.2 >prot_C-tenellus_contig10423.1.2 ID=prot_C-tenellus_contig10423.1.2|Name=mRNA_C-tenellus_contig10423.1.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=408bp MIDCGEMSKGLLPVPHLLSPTGRKLVVCVEIVHLTPVASSFFLPNKDTRRback to top mRNA from alignment at C-tenellus_contig10423:230..4800- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10423.1.2 ID=mRNA_C-tenellus_contig10423.1.2|Name=mRNA_C-tenellus_contig10423.1.2|organism=Choristocarpus tenellus KU2346|type=mRNA|length=4571bp|location=Sequence derived from alignment at C-tenellus_contig10423:230..4800- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10423:230..4800- >mRNA_C-tenellus_contig10423.1.2 ID=mRNA_C-tenellus_contig10423.1.2|Name=mRNA_C-tenellus_contig10423.1.2|organism=Choristocarpus tenellus KU2346|type=CDS|length=1224bp|location=Sequence derived from alignment at C-tenellus_contig10423:230..4800- (Choristocarpus tenellus KU2346)back to top |