mRNA_C-tenellus_contig10391.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10391.1.1 vs. uniprot
Match: D8LHK6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHK6_ECTSI) HSP 1 Score: 143 bits (361), Expect = 4.600e-38 Identity = 66/90 (73.33%), Postives = 73/90 (81.11%), Query Frame = 1 Query: 1 SWVPEILKHKRLRVVFTTEIHGYNLNLLYSHCRTVAPSLLVVEASNGAIFGGFCSHPWQ-PH-----NAIFGNGQCFLFRLNPNAATFRW 252 WVPEIL+HKRLRVVFTTEIHGYNL+LLYSHCRTV+PSLLVVEA+NG I GGFCS WQ PH ++GNGQCFLFRL+P T RW Sbjct: 397 KWVPEILRHKRLRVVFTTEIHGYNLDLLYSHCRTVSPSLLVVEAANGVILGGFCSDSWQYPHAKQSQGGMYGNGQCFLFRLHPQPTTCRW 486
BLAST of mRNA_C-tenellus_contig10391.1.1 vs. uniprot
Match: A0A7S2LZ67_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LZ67_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 3.790e-15 Identity = 33/87 (37.93%), Postives = 53/87 (60.92%), Query Frame = 1 Query: 1 SWVPEILKHKRLRVVFTTEIHGYNLNLLYSHCRTVAPSLLVVEA---SNGAIFGGFCSHPWQPHNAIFGNGQCFLFRLNPNAATFRW 252 W+P LK +L ++++TEIHG +L Y+ C +++++EA S A G F SH W + A +G+G+CFLFR++P+ F W Sbjct: 402 KWLPVSLKTTKLDLIYSTEIHGRSLAAFYNQCNRYKNTIVLIEAIVGSTTATIGMFASHAWNVNPASYGDGECFLFRVDPDPKCFNW 488
BLAST of mRNA_C-tenellus_contig10391.1.1 vs. uniprot
Match: A0A7S2R253_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R253_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 3.810e-15 Identity = 28/84 (33.33%), Postives = 53/84 (63.10%), Query Frame = 1 Query: 4 WVPEILKHKRLRVVFTTEIHGYNLNLLYSHCRTVAPSLLVVEA-SNGAIFGGFCSHPWQPHNAIFGNGQCFLFRLNPNAATFRW 252 W+P L++ +L ++++T +HG ++ Y HC+ +L ++E GA G + + W + ++G+G+CFLFRLNPN +++W Sbjct: 428 WLPIPLQNTKLDIIYSTNVHGRSVETFYKHCKNSKHTLTIMEVLKTGARIGMYAAQTWHFNTKVYGDGECFLFRLNPNPISYKW 511
BLAST of mRNA_C-tenellus_contig10391.1.1 vs. uniprot
Match: B8C4J4_THAPS (TLDc domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C4J4_THAPS) HSP 1 Score: 75.9 bits (185), Expect = 2.360e-14 Identity = 33/87 (37.93%), Postives = 51/87 (58.62%), Query Frame = 1 Query: 1 SWVPEILKHKRLRVVFTTEIHGYNLNLLYSHCRTVAPSLLVVEASNGAI---FGGFCSHPWQPHNAIFGNGQCFLFRLNPNAATFRW 252 W+ LK +L ++++TE+HG +L LY CR ++++VEA G I G F S W + + FG+G+CFLFR++P F W Sbjct: 164 KWLTTSLKSTKLDLIYSTEVHGRSLAALYKECRRTKHTIILVEAITGDISTTIGMFASQAWVVNPSCFGDGECFLFRVDPAPKCFNW 250
BLAST of mRNA_C-tenellus_contig10391.1.1 vs. uniprot
Match: A0A0L0HMA4_SPIPD (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HMA4_SPIPD) HSP 1 Score: 73.9 bits (180), Expect = 1.590e-13 Identity = 34/88 (38.64%), Postives = 51/88 (57.95%), Query Frame = 1 Query: 1 SWVPEILKHKRLRVVFTTEIHGYNLNLLYSHCRTVAPSLLVVEASNGAIFGGFCSHPW----QPHNAIFGNGQCFLFRLNPNAATFRW 252 SW+P + + L ++FTT+ HG ++N L+ AP +L+VE + GA+FG F SH W + +GNG+ FLF L P A + W Sbjct: 378 SWIPPSKRVEGLELLFTTKEHGTHVNNLFRRTDDRAPLILLVETTEGAVFGAFLSHAWPGEGERTGEWYGNGETFLFTLEPYAKLYPW 465
BLAST of mRNA_C-tenellus_contig10391.1.1 vs. uniprot
Match: T0QKD0_SAPDV (Uncharacterized protein n=3 Tax=Saprolegnia TaxID=4769 RepID=T0QKD0_SAPDV) HSP 1 Score: 72.0 bits (175), Expect = 5.350e-13 Identity = 28/72 (38.89%), Postives = 43/72 (59.72%), Query Frame = 1 Query: 37 RVVFTTEIHGYNLNLLYSHCRTVAPSLLVVEASNGAIFGGFCSHPWQPHNAIFGNGQCFLFRLNPNAATFRW 252 ++ ++ HG +L LY + R P+++VVE S+G +FG F S PW P + +G G+CFLF P+ F W Sbjct: 194 KIAYSLAQHGASLGTLYRNVRGKRPTIVVVETSDGDVFGAFASMPWSPSTSYYGTGECFLFTCYPSFEHFAW 265
BLAST of mRNA_C-tenellus_contig10391.1.1 vs. uniprot
Match: A0A507DXW7_9FUNG (Uncharacterized protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507DXW7_9FUNG) HSP 1 Score: 72.4 bits (176), Expect = 5.550e-13 Identity = 31/88 (35.23%), Postives = 50/88 (56.82%), Query Frame = 1 Query: 1 SWVPEILKHKRLRVVFTTEIHGYNLNLLYSHCRTVAPSLLVVEASNGAIFGGFCSHPW----QPHNAIFGNGQCFLFRLNPNAATFRW 252 SW+P + + L ++FTT+ HG ++ L++ P +LV+ + GA+FG + SHPW + +GNG+ FLF L P A + W Sbjct: 379 SWIPPAKRVEGLELLFTTKEHGSHITNLFNRSEDRFPLILVMSTTEGAVFGAYLSHPWPAPDEKKGEWYGNGETFLFTLEPYAKLYPW 466
BLAST of mRNA_C-tenellus_contig10391.1.1 vs. uniprot
Match: A0A7S1D074_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D074_CYCTE) HSP 1 Score: 66.6 bits (161), Expect = 5.880e-12 Identity = 27/78 (34.62%), Postives = 48/78 (61.54%), Query Frame = 1 Query: 1 SWVPEILKHKRLRVVFTTEIHGYNLNLLYSHCRTVAPSLLVVEA-SNGAIFGGFCSHPWQPHNAIFGNGQCFLFRLNP 231 +W+P L+ +L ++++T +HG L Y + ++L+ E +N A+ G F S W+ N ++G+G+CFLFRL+P Sbjct: 71 TWLPLSLRLTKLDLLYSTNVHGRTLESFYYRVKKTGHTILLCEVLNNDAVIGMFASQHWRISNKVYGDGECFLFRLSP 148
BLAST of mRNA_C-tenellus_contig10391.1.1 vs. uniprot
Match: A0A1Z5JC52_FISSO (TLDc domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JC52_FISSO) HSP 1 Score: 68.9 bits (167), Expect = 9.240e-12 Identity = 28/89 (31.46%), Postives = 50/89 (56.18%), Query Frame = 1 Query: 1 SWVPEILKHKRLRVVFTTEIHGYNLNLLYSHCRTVAPSLLVVEA-----SNGAIFGGFCSHPWQPHNAIFGNGQCFLFRLNPNAATFRW 252 +W+P L+ L ++F+T HG +L + Y+ + ++L+ E S I G + S PW+P ++G+G CFLFR+ P+ ++W Sbjct: 420 AWMPLTLRMVNLNLLFSTNCHGRSLGMFYNRVQRAKHTILLCEVLSSTKSELTIVGFYASQPWRPSPKVYGDGSCFLFRVQPDPRCWKW 508
BLAST of mRNA_C-tenellus_contig10391.1.1 vs. uniprot
Match: B7FZL6_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FZL6_PHATC) HSP 1 Score: 68.2 bits (165), Expect = 1.720e-11 Identity = 31/92 (33.70%), Postives = 53/92 (57.61%), Query Frame = 1 Query: 1 SWVPEILKHKRLRVVFTTEIHGYNLNLLYSHCRTVAPSLLVVE------ASNGA--IFGGFCSHPWQPHNAIFGNGQCFLFRLNPNAATFRW 252 +W+P ++ L ++++T HG +L YSH +T + ++ E ASNG I G + S W+ ++G+G+CFLFRL+P+A + W Sbjct: 416 TWLPLAMRLTNLDLLYSTNYHGRSLERFYSHVKTSKHTFVLCEVLDGSVASNGTPTIVGMYASQAWRASPRVYGDGECFLFRLSPDAECWTW 507 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10391.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10391.1.1 >prot_C-tenellus_contig10391.1.1 ID=prot_C-tenellus_contig10391.1.1|Name=mRNA_C-tenellus_contig10391.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=84bp SWVPEILKHKRLRVVFTTEIHGYNLNLLYSHCRTVAPSLLVVEASNGAIFback to top mRNA from alignment at C-tenellus_contig10391:4084..4717- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10391.1.1 ID=mRNA_C-tenellus_contig10391.1.1|Name=mRNA_C-tenellus_contig10391.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=634bp|location=Sequence derived from alignment at C-tenellus_contig10391:4084..4717- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10391:4084..4717- >mRNA_C-tenellus_contig10391.1.1 ID=mRNA_C-tenellus_contig10391.1.1|Name=mRNA_C-tenellus_contig10391.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=252bp|location=Sequence derived from alignment at C-tenellus_contig10391:4084..4717- (Choristocarpus tenellus KU2346)back to top |