mRNA_C-tenellus_contig10375.2.2 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10375.2.2 vs. uniprot
Match: D7FY72_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY72_ECTSI) HSP 1 Score: 121 bits (303), Expect = 1.990e-25 Identity = 68/109 (62.39%), Postives = 70/109 (64.22%), Query Frame = 1 Query: 1030 QIPRTADFILKGGFRRVALQFPDALLPEAPEVLWALQGMLRKAIGEGMRLGGGDVGDAGVE-----------GLEGLPLIFVTGDTSYGSCCVDEVSAQHLKADAIVHY 1323 +IPRT FI G FRRVALQFPD LL EAPEVLW LQ LRK G+R V G E PLIFVTGDTSYGSCCVDEVSAQHLKADAIVHY Sbjct: 53 EIPRTTAFIADGNFRRVALQFPDVLLREAPEVLWTLQARLRKLAAGGVR----SVSQVGREEEGEGKGPSEVATTAPPLIFVTGDTSYGSCCVDEVSAQHLKADAIVHY 157
BLAST of mRNA_C-tenellus_contig10375.2.2 vs. uniprot
Match: A0A5D6Y0U0_9STRA (2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y0U0_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 1.540e-16 Identity = 51/98 (52.04%), Postives = 62/98 (63.27%), Query Frame = 1 Query: 1030 QIPRTADFILKGGFRRVALQFPDALLPEAPEVLWALQGMLRKAIGEGMRLGGGDVGDAGVEGLEGLPLIFVTGDTSYGSCCVDEVSAQHLKADAIVHY 1323 +I RTA+ + GGFR VALQFPD+LLP+AP V Q L A+GE + +G +FV GDTSYGSCCVDEV+AQHL AD +VHY Sbjct: 40 EIARTAEQLRVGGFRAVALQFPDSLLPDAPRV----QRELTAALGERFAV------------ADGSARVFVLGDTSYGSCCVDEVAAQHLAADCVVHY 121
BLAST of mRNA_C-tenellus_contig10375.2.2 vs. uniprot
Match: A0A059DB33_EUCGR (2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 n=6 Tax=Myrtoideae TaxID=1699513 RepID=A0A059DB33_EUCGR) HSP 1 Score: 89.4 bits (220), Expect = 2.550e-15 Identity = 54/113 (47.79%), Postives = 68/113 (60.18%), Query Frame = 1 Query: 1030 QIPRTADFILKGGFRRVALQFPDALLPEAPEVLWALQ---GMLRKAIGEGMRLGGGDVGDAGVEGLEGLPLIFVTGDTSYGSCCVDEVSAQHLKADAIVHYAHLRSKTSYTPT 1359 +I RTA+FIL F RVALQFPD LL +A +V+ AL LR + GE +R G GD+G +FV DT++GSCCVDEV A H+ AD ++HY H T TPT Sbjct: 8 EIDRTAEFILSRNFARVALQFPDDLLKDATKVVRALHTKLASLRASSGEEIR-GDGDIG------------LFVMADTTFGSCCVDEVGASHINADCVIHYGH----TCLTPT 103
BLAST of mRNA_C-tenellus_contig10375.2.2 vs. uniprot
Match: A0A316VDQ5_9BASI (2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 n=1 Tax=Meira miltonrushii TaxID=1280837 RepID=A0A316VDQ5_9BASI) HSP 1 Score: 89.4 bits (220), Expect = 3.010e-15 Identity = 43/102 (42.16%), Postives = 62/102 (60.78%), Query Frame = 1 Query: 1024 LSQIPRTADFILKGGFRRVALQFPDALLPEAPEVLWALQGMLRKAIGEGMRLGGGDVGDAGVEGLEGLPLIFVTGDTSYGSCCVDEVSAQHLKADAIVHYAH 1329 L I A IL+ F+R+ALQFPD LL +A +V W+L+ L+++ +GL LP ++V DTSYG+CCVDEV+A+H+ AD +VH+ H Sbjct: 38 LYDIKHVAQLILQHNFQRIALQFPDELLSDASKVFWSLEDTLKRS-----------------KGLRDLPELYVLADTSYGNCCVDEVAAEHIDADLVVHFGH 122
BLAST of mRNA_C-tenellus_contig10375.2.2 vs. uniprot
Match: A0A175YLY9_DAUCS (2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A175YLY9_DAUCS) HSP 1 Score: 88.2 bits (217), Expect = 6.260e-15 Identity = 55/118 (46.61%), Postives = 70/118 (59.32%), Query Frame = 1 Query: 1021 GLSQIPRTADFILKGGFRRVALQFPDALLPEAPEVLWALQG---MLRKAIGEGMRLGGGDVGDAGVEGLEGLPLIFVTGDTSYGSCCVDEVSAQHLKADAIVHYAHLRSKTSYTPTGN 1365 G +I A FIL FRRVALQFPD LL E+ V+ AL+ +L+K+ GE R DV D G ++V GDT+YGSCCVDEV+A H+ AD ++HY H T +PT N Sbjct: 5 GFYEIEAVARFILTRDFRRVALQFPDELLKESTRVVRALREKLHVLKKSTGERDR----DVRDIG---------LYVMGDTTYGSCCVDEVAASHIHADCVIHYGH----TCLSPTSN 105
BLAST of mRNA_C-tenellus_contig10375.2.2 vs. uniprot
Match: UPI0003599D9F (2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI0003599D9F) HSP 1 Score: 87.4 bits (215), Expect = 1.060e-14 Identity = 46/100 (46.00%), Postives = 56/100 (56.00%), Query Frame = 1 Query: 1030 QIPRTADFILKGGFRRVALQFPDALLPEAPEVLWALQGMLRKAIGEGMRLGGGDVGDAGVEGLEGLPLIFVTGDTSYGSCCVDEVSAQHLKADAIVHYAH 1329 +I R+ +ILKG F+RVALQFPD LL +AP V + +A L+F+ GDTSYGSCCVDEV AQH KAD I+HY H Sbjct: 33 EISRSVQWILKGDFKRVALQFPDELLVDAPAVATKIHSEASEA------------------------LVFLLGDTSYGSCCVDEVGAQHYKADCIIHYGH 108
BLAST of mRNA_C-tenellus_contig10375.2.2 vs. uniprot
Match: A0A8K1C3Y9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C3Y9_PYTOL) HSP 1 Score: 87.0 bits (214), Expect = 1.480e-14 Identity = 48/97 (49.48%), Postives = 58/97 (59.79%), Query Frame = 1 Query: 1033 IPRTADFILKGGFRRVALQFPDALLPEAPEVLWALQGMLRKAIGEGMRLGGGDVGDAGVEGLEGLPLIFVTGDTSYGSCCVDEVSAQHLKADAIVHY 1323 I RT + + +GG+R +ALQFPD+LLP+AP V LQ L D E +FV GDTSYGSCCVDEV+AQHL+AD IVHY Sbjct: 41 IVRTVEQLRRGGYRSIALQFPDSLLPDAPRVQVELQSRL----------------DGQTE------RVFVLGDTSYGSCCVDEVAAQHLRADCIVHY 115
BLAST of mRNA_C-tenellus_contig10375.2.2 vs. uniprot
Match: K3WI16_GLOUD (2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WI16_GLOUD) HSP 1 Score: 87.0 bits (214), Expect = 1.490e-14 Identity = 46/98 (46.94%), Postives = 57/98 (58.16%), Query Frame = 1 Query: 1030 QIPRTADFILKGGFRRVALQFPDALLPEAPEVLWALQGMLRKAIGEGMRLGGGDVGDAGVEGLEGLPLIFVTGDTSYGSCCVDEVSAQHLKADAIVHY 1323 +I RT + I +GG++ +ALQFPD+LLP+AP V L+ L G IF+ GDTSYGSCCVDEV+AQHL AD IVHY Sbjct: 40 EIARTLEQIRRGGYKNIALQFPDSLLPDAPRVQQELKNGLESC---------------------GYERIFILGDTSYGSCCVDEVAAQHLFADCIVHY 116
BLAST of mRNA_C-tenellus_contig10375.2.2 vs. uniprot
Match: A0A0K9QUC0_SPIOL (Uncharacterized protein (Fragment) n=3 Tax=Spinacia oleracea TaxID=3562 RepID=A0A0K9QUC0_SPIOL) HSP 1 Score: 86.3 bits (212), Expect = 1.780e-14 Identity = 46/100 (46.00%), Postives = 64/100 (64.00%), Query Frame = 1 Query: 1030 QIPRTADFILKGGFRRVALQFPDALLPEAPEVLWALQGMLRKAIGEGMRLGGGDVGDAGVEGLEGLPLIFVTGDTSYGSCCVDEVSAQHLKADAIVHYAH 1329 ++ RTAD+I F RVALQFPD LL ++ V+ AL+ LR ++ D G++ VEG + + L +V DT+YGSCC+DEV A H+ AD +VHY H Sbjct: 8 EVDRTADYIYSHNFTRVALQFPDELLKDSIRVVRALRDKLRA-----LQKCNDDSGESLVEGRKDVGL-YVMADTTYGSCCIDEVGAAHINADCVVHYGH 101
BLAST of mRNA_C-tenellus_contig10375.2.2 vs. uniprot
Match: A0A484E0M7_BRELC (2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E0M7_BRELC) HSP 1 Score: 86.3 bits (212), Expect = 2.610e-14 Identity = 48/97 (49.48%), Postives = 56/97 (57.73%), Query Frame = 1 Query: 1033 IPRTADFILKGGFRRVALQFPDALLPEAPEVLWALQGMLRKAIGEGMRLGGGDVGDAGVEGLEGLPLIFVTGDTSYGSCCVDEVSAQHLKADAIVHY 1323 I RT D I GG+ ++ALQFPD+LLP+APEV L+ L L +FV GDTSYGSCCVDEV+AQHL AD IVHY Sbjct: 41 IARTVDQIRWGGYTKIALQFPDSLLPDAPEVQQELKNEL----------------------LGQYERVFVLGDTSYGSCCVDEVAAQHLLADCIVHY 115 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10375.2.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10375.2.2 >prot_C-tenellus_contig10375.2.2 ID=prot_C-tenellus_contig10375.2.2|Name=mRNA_C-tenellus_contig10375.2.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=159bp MYVGLSQIPRTADFILKGGFRRVALQFPDALLPEAPEVLWALQGMLRKAIback to top mRNA from alignment at C-tenellus_contig10375:2731..5368+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10375.2.2 ID=mRNA_C-tenellus_contig10375.2.2|Name=mRNA_C-tenellus_contig10375.2.2|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2638bp|location=Sequence derived from alignment at C-tenellus_contig10375:2731..5368+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10375:2731..5368+ >mRNA_C-tenellus_contig10375.2.2 ID=mRNA_C-tenellus_contig10375.2.2|Name=mRNA_C-tenellus_contig10375.2.2|organism=Choristocarpus tenellus KU2346|type=CDS|length=477bp|location=Sequence derived from alignment at C-tenellus_contig10375:2731..5368+ (Choristocarpus tenellus KU2346)back to top |