mRNA_C-tenellus_contig1037.4.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig1037.4.1 vs. uniprot
Match: A0A6H5JGV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGV1_9PHAE) HSP 1 Score: 219 bits (559), Expect = 4.020e-62 Identity = 123/247 (49.80%), Postives = 152/247 (61.54%), Query Frame = 1 Query: 763 LYQSVWPLTSASMLFEMWC*S------FGFFSIPQATLGSACTEENKKEED-----KTLWEGEELALRYVLEDGKLNVCLRNLTEWREFEKKRRAQKDDAKEEKKEA-DLLDDFEKGMGMMLCHAWNHVEALQTTDIPLLVHYITGVLEETVKDPQRVREMSLRGDINNRQEVMCLHYFHSLISHVDCMGEERVMPFVRAAGTTTALAKMLHTNHSWIGDSALMLGAEVLAMVCATEDFATYRASAI 1467 L ++ L + +L + WC S +A L C E +KE + KTLWEGEE+ALRYVLEDGKLNVCLRNL+EWR+F + RR A E+ + LD FEKGMG +L +AW HVEALQTTDIPLLV Y+TGV + +P V +MSLRGD+ RQE++CL Y L+S + E RVMP +R A T + LA MLH NH +G A +GAE LA VC TEDF TYR I Sbjct: 30 LRGNIRALGAFPLLSDEWCKMATALGRIAEISEAEARLTQDCIEGERKEGERKDCPKTLWEGEEMALRYVLEDGKLNVCLRNLSEWRKFHRNRRDGGGQAGEDGPLVLESLDSFEKGMGTVLRNAWTHVEALQTTDIPLLVEYVTGVYRDAADNPGAVEDMSLRGDLAGRQEIVCLSYLRGLVSCLSDYEEGRVMPHLRGAETVSCLAAMLHANHRHLGMEAAAVGAEALAFVCGTEDFITYREEYI 276
BLAST of mRNA_C-tenellus_contig1037.4.1 vs. uniprot
Match: A0A835YQR7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQR7_9STRA) HSP 1 Score: 206 bits (525), Expect = 6.170e-57 Identity = 102/186 (54.84%), Postives = 138/186 (74.19%), Query Frame = 1 Query: 898 KTLWEGEELALRYVLEDGKLNVCLRNLTEWREFEKKRRAQKDDAKEEKKEADLLDDFEKGMGMMLCHAWNHVEALQTTDIPLLVHYITGVLEETVKDPQRVREMSLRGDINNRQEVMCLHYFHSLISHVDCMGEERVMPFVRAAGTTTALAKMLHTNHSWIGDSALMLGAEVLAMVCATEDFATYR 1455 +TLWEGEE ALRYV+EDGKLN+CLRNL +++ +E K R+ DD + E+++ DL+D FEKGMG ML +AWNHVEALQTTD+P LV++IT V + P+RV +++ DI +RQEV+C++Y H ++ ++ M EERVMP +RAAGT ALA+ML + H+ +G A LG L + C TEDFATYR Sbjct: 25 QTLWEGEEQALRYVIEDGKLNICLRNLVDFKAYEMKLRS--DDVEPEQRQKDLMDKFEKGMGCMLRNAWNHVEALQTTDMPALVNHITTVFSDAADSPERVAQLT---DITDRQEVLCMYYLHGMVGQMEEMSEERVMPMLRAAGTLVALARMLSSCHAALGRDARELGTVCLGLACGTEDFATYR 205
BLAST of mRNA_C-tenellus_contig1037.4.1 vs. uniprot
Match: D7G0I2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0I2_ECTSI) HSP 1 Score: 203 bits (516), Expect = 4.080e-56 Identity = 106/187 (56.68%), Postives = 128/187 (68.45%), Query Frame = 1 Query: 910 EGEELALRYVLEDGKLNVCLRNLTEWREFEKKRRAQKDDAKEEKKEA-DLLDDFEKGMGMMLCHAWNHVEALQTTDIPLLVHYITGVLEETVKDPQRVREMSLRGDINNRQEVMCLHYFHSLISHVDCMGEERVMPFVRAAGTTTALAKMLHTNHSWIGDSALMLGAEVLAMVCATEDFATYRASAI 1467 E EE+ALRYVLEDGKLNVCLRNL+EWR+F + RR A E+ + L+ FEKGMG +L +AW HVEALQTTDIPLLV Y+TGV + +P V +MSLRGD+ RQE++CL Y L+S + E RVMP +R AGT + LA MLH NH +G A +GAE LA VC TEDF TYR I Sbjct: 61 EAEEMALRYVLEDGKLNVCLRNLSEWRKFHRNRRDGGGQAGEDGPLVLESLNSFEKGMGTVLRNAWTHVEALQTTDIPLLVEYVTGVYRDAADNPDAVEDMSLRGDLAGRQEIVCLSYLRGLVSRLSDHEEGRVMPHLRGAGTVSCLAAMLHANHRHLGMEAAAVGAEALAFVCGTEDFITYREEYI 247
BLAST of mRNA_C-tenellus_contig1037.4.1 vs. uniprot
Match: A0A7S2V4C5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4C5_9STRA) HSP 1 Score: 176 bits (447), Expect = 2.260e-46 Identity = 93/234 (39.74%), Postives = 147/234 (62.82%), Query Frame = 1 Query: 763 LYQSVWPLTSASMLFEMW---C*SFGFFSIPQATLGSACTEENKKEEDKTLWEGEELALRYVLEDGKLNVCLRNLTEWREFEKKRRAQKDDAKEEKKEADLLDDFEKGMGMMLCHAWNHVEALQTTDIPLLVHYITGVLEETVKDPQRVREMSLRGDINNRQEVMCLHYFHSLISHVDCMGEERVMPFVRAAGTTTALAKMLHTNHSWIGDSALMLGAEVLAMVCATEDFATYR 1455 L ++ L S +L + W +FG A + ++ K E+ TLWE EELALRY+LEDGKLN+CLRNL E++ FE++ R + + D LD FEKG+G +L +AW HVEA+QTTD+PLL++YI V+E+ V++P R+ G++ RQEV+ ++Y SL++ VD + E+RVMP ++ + L ++H +H+ + + L+ + L+++C TEDF+TY+ Sbjct: 27 LRTAIRALGSFPVLSDSWNGMADTFGRI----ANISDMESKLPKDSENATLWECEELALRYLLEDGKLNLCLRNLVEFKNFERELRNAPATLPTDHR--DKLDAFEKGLGCVLRNAWRHVEAIQTTDLPLLINYIGDVMEDAVRNPTRLESFQKAGELEKRQEVVVIYYLASLMTQVDEVSEDRVMPLIKERRLFSLLVSVMHAHHAKLNEGDLLAALKALSLICDTEDFSTYK 254
BLAST of mRNA_C-tenellus_contig1037.4.1 vs. uniprot
Match: A0A067CKH1_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CKH1_SAPPC) HSP 1 Score: 155 bits (392), Expect = 8.300e-39 Identity = 85/194 (43.81%), Postives = 125/194 (64.43%), Query Frame = 1 Query: 886 KEEDKTLWEGEELALRYVLEDGKLNVCLRNLTEWREFEKKRRAQKDDAKEEKKEADLLDDFEKGMGMMLCHAWNHVEALQTTDIPLLVHYITGVLEETVKDPQRVREMSLRGDINNRQEVMCLHYFHSLISHVDCMGEERVMPFVRAAGTTTALAKMLHTNHSWIGDSALMLGAEVLAMVCATEDFATYRASAI 1467 K+E+ TLWE EELALRY+LEDGKLN+CLR L E++E+E+ + DA+ + DLL FE+G+G+ML +AW HVEALQTTD+PLLV YI VL ++P+ + D+ + QEV+ L+Y H L+ +D +GE R+MP ++ + L NH+ +++ AEVLA +C +EDF T+ + + Sbjct: 66 KQENATLWECEELALRYILEDGKLNLCLRLLVEYKEYERNTLGRDFDAEAK----DLLLKFERGLGVMLKNAWLHVEALQTTDLPLLVEYIASVLTFCHEEPEFYKTK----DLEDCQEVIVLYYLHGLMKRLDDIGESRIMPLLQERQVFELVLWHLQHNHTSFSPDDVLVTAEVLAQICDSEDFQTHPTAYV 251
BLAST of mRNA_C-tenellus_contig1037.4.1 vs. uniprot
Match: A0A485L431_9STRA (Aste57867_15868 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L431_9STRA) HSP 1 Score: 154 bits (390), Expect = 1.610e-38 Identity = 91/200 (45.50%), Postives = 124/200 (62.00%), Query Frame = 1 Query: 886 KEEDKTLWEGEELALRYVLEDGKLNVCLRNLTEWREFEKKRRAQKDDAKEEKKEADLLDDFEKGMGMMLCHAWNHVEALQTTDIPLLVHYITGVLEETVKDPQRVREMSLRGDINNRQEVMCLHYFHSLISHVDCMGEERVMPFVRAAGTTTALAKMLHTNHSWIGDSALMLGAEVLAMVCATEDFATYRASAIYFVSMQ 1485 K+E+ TLWE EELALRY+LEDGKLN+CLR L E++ +E ++ DA E KE + FE+G+G+ML +AW HVEALQTTD+PLL+ Y+ VL ++P V D+ + QEV+ ++Y H L ++ + E RVMP V+ LA L N S + +GAEVLA++C TEDF T+ S YF S Q Sbjct: 66 KQENATLWECEELALRYILEDGKLNLCLRILVEYKSYEHGTAHREMDA--ETKEIVAM--FERGLGVMLKNAWLHVEALQTTDLPLLIEYVASVLTFCEEEPAYVETK----DLEDSQEVIVMYYLHGLFKQLEHISESRVMPLVQEKNIFALLAAHLQRNWKSFSPSDVRVGAEVLALICDTEDFQTHSES--YFPSDQ 255
BLAST of mRNA_C-tenellus_contig1037.4.1 vs. uniprot
Match: W4FWN5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FWN5_9STRA) HSP 1 Score: 153 bits (386), Expect = 5.560e-38 Identity = 86/203 (42.36%), Postives = 128/203 (63.05%), Query Frame = 1 Query: 886 KEEDKTLWEGEELALRYVLEDGKLNVCLRNLTEWREFEKKRRAQKDDAKEEKKEADLLDDFEKGMGMMLCHAWNHVEALQTTDIPLLVHYITGVLEETVKDPQRVREMSLRGDINNRQEVMCLHYFHSLISHVDCMGEERVMPFVRAAGTTTALAKMLHTNHSWIGDSALMLGAEVLAMVCATEDFATYRASAIYFVSMQPTC 1494 K+++ TLWE EELALRY+LEDGKLN+CLR L E++++E + D E KE L+ FE+G+G+ML +AW HVEALQTTD+PLL+ Y+ GVL ++P V + D+ + QE++ ++Y H L+ ++ + E+RVMP V LA + + D+ +++ EVLA++C TEDF T+ S +VS TC Sbjct: 66 KQDNATLWECEELALRYILEDGKLNLCLRLLVEYKDYE--HGISQRDLDPEAKE--LISQFERGLGVMLKNAWLHVEALQTTDLPLLLEYVAGVLTFCEEEPAYVEKK----DLVDSQEILVVYYLHGLLKQLEHISEDRVMPLVLEKQLFALLASHIQRHWKSFSDTDVIVACEVLALLCDTEDFQTHGPS---YVSSAQTC 257
BLAST of mRNA_C-tenellus_contig1037.4.1 vs. uniprot
Match: A0A1V9ZS11_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZS11_9STRA) HSP 1 Score: 149 bits (375), Expect = 1.800e-36 Identity = 86/194 (44.33%), Postives = 122/194 (62.89%), Query Frame = 1 Query: 886 KEEDKTLWEGEELALRYVLEDGKLNVCLRNLTEWREFEKKRRAQKDDAKEEKKEADLLDDFEKGMGMMLCHAWNHVEALQTTDIPLLVHYITGVLEETVKDPQRVREMSLRGDINNRQEVMCLHYFHSLISHVDCMGEERVMPFVRAAGTTTALAKMLHTNHSWIGDSALMLGAEVLAMVCATEDFATYRASAI 1467 K+E+ TLWE EELALRY+LEDGKLN+CLR L +++E+E+ + DA E KE LL FE+G+G+ML +AW HVEALQTTD+PLLV YI VL ++P+ + D+ + QEV+ L+Y L ++ +GE R+MP V+ + L NH + ++ A+VLA +C TEDF T+ + I Sbjct: 66 KQENATLWECEELALRYILEDGKLNLCLRLLVDYKEYERNTIGRDFDA--EAKE--LLLKFERGLGVMLKNAWLHVEALQTTDLPLLVEYIATVLTFCHEEPEFFKSK----DLEDSQEVIVLYYLQGLFKRLEDIGESRIMPLVQERQIFELVLWHLQHNHRSLSPEDTLVAADVLAQICDTEDFQTHPEAYI 251
BLAST of mRNA_C-tenellus_contig1037.4.1 vs. uniprot
Match: A0A024TTX0_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TTX0_9STRA) HSP 1 Score: 144 bits (363), Expect = 7.810e-35 Identity = 81/196 (41.33%), Postives = 119/196 (60.71%), Query Frame = 1 Query: 886 KEEDKTLWEGEELALRYVLEDGKLNVCLRNLTEWREFEK--KRRAQKDDAKEEKKEADLLDDFEKGMGMMLCHAWNHVEALQTTDIPLLVHYITGVLEETVKDPQRVREMSLRGDINNRQEVMCLHYFHSLISHVDCMGEERVMPFVRAAGTTTALAKMLHTNHSWIGDSALMLGAEVLAMVCATEDFATYRASAI 1467 K E+ TLWE EELALRY+LEDGKLN+CLR L E++++E +R D K L+ FE+G+G+ML +AW HVEALQTTD+PLL+ YI GVL ++P V + D+ + QE + ++Y H L+ ++ + E+RVMP V L + + D +++ EVLA++C TEDF ++ S + Sbjct: 66 KHENATLWECEELALRYILEDGKLNLCLRLLVEYKDYEHGISQRELDPDTKA------LVSQFERGLGVMLKNAWLHVEALQTTDLPLLLEYIAGVLTFCEEEPVFVEKK----DLVDSQETIVVYYLHGLLKQLEHISEDRVMPLVLEKQLFALLTSHIQRHWKLFSDVDVLVACEVLALICDTEDFQSHAQSYV 251
BLAST of mRNA_C-tenellus_contig1037.4.1 vs. uniprot
Match: A0A1W0ACG5_9STRA (DUF218 domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0ACG5_9STRA) HSP 1 Score: 148 bits (374), Expect = 3.990e-34 Identity = 81/194 (41.75%), Postives = 120/194 (61.86%), Query Frame = 1 Query: 886 KEEDKTLWEGEELALRYVLEDGKLNVCLRNLTEWREFEKKRRAQKDDAKEEKKEADLLDDFEKGMGMMLCHAWNHVEALQTTDIPLLVHYITGVLEETVKDPQRVREMSLRGDINNRQEVMCLHYFHSLISHVDCMGEERVMPFVRAAGTTTALAKMLHTNHSWIGDSALMLGAEVLAMVCATEDFATYRASAI 1467 K+E+ TLWE EELALRY+LEDGKLN+CLR L E++E+E+ + D +K L+ FE+G+G+ML +AW HVEALQTTD+PLL+ Y+ +L ++P E D + QEV+ L+Y H L+ ++ +GE R+MP ++ +A L N+ + AEVLA++C TEDF T+ + + Sbjct: 382 KQENATLWECEELALRYILEDGKLNLCLRILVEYKEYERNTAIRDFDPDTKK----LMASFERGLGVMLKNAWLHVEALQTTDLPLLIEYVATILNNCREEPGFFSEK----DPADSQEVIVLYYLHGLLKRLEDIGESRIMPLMQERQIFELVAWHLEHNNRSFSPEDTLTAAEVLALICDTEDFQTHPTNYV 567 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig1037.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig1037.4.1 >prot_C-tenellus_contig1037.4.1 ID=prot_C-tenellus_contig1037.4.1|Name=mRNA_C-tenellus_contig1037.4.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=140bp MGMMLCHAWNHVEALQTTDIPLLVHYITGVLEETVKDPQRVREMSLRGDIback to top mRNA from alignment at C-tenellus_contig1037:3755..10973+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig1037.4.1 ID=mRNA_C-tenellus_contig1037.4.1|Name=mRNA_C-tenellus_contig1037.4.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=7219bp|location=Sequence derived from alignment at C-tenellus_contig1037:3755..10973+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig1037:3755..10973+ >mRNA_C-tenellus_contig1037.4.1 ID=mRNA_C-tenellus_contig1037.4.1|Name=mRNA_C-tenellus_contig1037.4.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=420bp|location=Sequence derived from alignment at C-tenellus_contig1037:3755..10973+ (Choristocarpus tenellus KU2346)back to top |