mRNA_C-tenellus_contig10369.1.1 (mRNA) Choristocarpus tenellus KU2346
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-tenellus_contig10369.1.1 vs. uniprot
Match: A0A4C1WQX8_EUMVA (Uncharacterized protein n=2 Tax=Eumeta variegata TaxID=151549 RepID=A0A4C1WQX8_EUMVA) HSP 1 Score: 141 bits (356), Expect = 1.320e-38 Identity = 92/183 (50.27%), Postives = 108/183 (59.02%), Query Frame = 1 Query: 4 LFLDSMGGGAWPFLVDTLAHCLVNSSNKRGPCLLNRGAYACTWG---------------------------NNRPVMPFDVLGRTRATLMHATRFV*PWSRDPGNLLNVHRDRDRSLQLLILNKEFLVNASHQLALITSLPFVHTAHHTYRLNVSVKILNRVAGA-SLLPHRGKLSELQYLEE 468 LFLDS+GGGAWPFLV A CLVNS N+R LLNR ++ G NNR VMP DVLGRTRATL + PW R PGN L + R D LQL +N+EFLV+ASH+LALITSLPFVHTA YRLN V+ +R A A S + GKL++L +LEE Sbjct: 48 LFLDSVGGGAWPFLVGG-AICLVNSGNERDSSLLNRRRHSGVRGVRVARLTGGVIKIFLEGPAASSRTRLSNNRSVMPLDVLGRTRATLKESACS--PWPRGPGNPLKLLRAGDWGLQLSPINEEFLVSASHKLALITSLPFVHTARRYYRLNDLVRSSDRHAVALSAVGVAGKLTKLDHLEE 227
BLAST of mRNA_C-tenellus_contig10369.1.1 vs. uniprot
Match: A0A425BZS1_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A425BZS1_9STRA) HSP 1 Score: 137 bits (344), Expect = 1.850e-38 Identity = 81/129 (62.79%), Postives = 87/129 (67.44%), Query Frame = 1 Query: 19 MGGGAWPFLVDTLAHCLVNSSNKRGPCLLNRGAYAC----TWGNNRPVMPFDVLGRTRATLMHATRFV*PWSRDPGNLLNVHRDRDRSLQLLILNKEFLVNASHQLALITSLPFVHTAHHTYRLNVSVK 393 MGGGAWPFLV + CLVNS N+R L R + GNNR VM DVLGRTRATLM +T GNLLN HR RDR LQ +LN+EFLVNASHQLALITSLPFVHTA TYRLN SVK Sbjct: 1 MGGGAWPFLVGGVI-CLVNSVNERD---LRRDFWVIKPKEVGGNNRSVMLLDVLGRTRATLMRSTSL--------GNLLNAHRARDRLLQFSVLNEEFLVNASHQLALITSLPFVHTARRTYRLNDSVK 117
BLAST of mRNA_C-tenellus_contig10369.1.1 vs. uniprot
Match: A0A7M7L1S7_VARDE (Uncharacterized protein n=1 Tax=Varroa destructor TaxID=109461 RepID=A0A7M7L1S7_VARDE) HSP 1 Score: 134 bits (338), Expect = 2.650e-37 Identity = 83/162 (51.23%), Postives = 97/162 (59.88%), Query Frame = 1 Query: 10 LDSMGGGAWPFLVDTLAHCLVNSSNKRGPCLLNR----------------GAYACTWGNNRPVMPFDVLGRTRATLMHATRFV*PWSRDPGNLLNVHRDRDRSLQLLILNKEFLVNASHQLALITSLPFVHTAHHTYRLNVSVKILN----RVAGASLLPHR 435 LDS+GGGAWPFLV A CLVNS N+R LLNR + NNR VMP DVLGRTRATL + F PW + PGN LN+ R RD LQL +N+EF V+ASH+LALITSLPFVHTA YRLN V+ + V+ +LP R Sbjct: 1 LDSVGGGAWPFLVGG-AICLVNSDNERDSSLLNRRNLWYLEGPRLRSEQAASSRTRLSNNRSVMPLDVLGRTRATLKESACF--PWPKGPGNPLNLLRARDWGLQLFPMNEEFPVSASHKLALITSLPFVHTARRYYRLNDLVRSSDWCAANVSALPMLPGR 159
BLAST of mRNA_C-tenellus_contig10369.1.1 vs. uniprot
Match: A0A2T5LKN2_9EURO (Uncharacterized protein n=1 Tax=Aspergillus ochraceoroseus IBT 24754 TaxID=1392256 RepID=A0A2T5LKN2_9EURO) HSP 1 Score: 121 bits (304), Expect = 1.270e-32 Identity = 66/120 (55.00%), Postives = 77/120 (64.17%), Query Frame = 1 Query: 133 GNNRPVMPFDVLGRTRATLMHATRFV*PWSRDPGNLLNVHRDRDRSLQLLILNKEFLVNASHQLALITSLPFVHTAHHTYRLNVSVKILNRVAGASLLPHRGKLSELQYLEEGEAITRFP 492 GNNR VMP DVLGRTRATL PW R GNL+ R DR+LQLL+ N+E LV SHQL ITSLPFVHTA YRLN SV++ G + P GKL + +LEE + +TRFP Sbjct: 5 GNNRSVMPLDVLGRTRATLTGPASTS-PWPRGLGNLVKPCRAGDRALQLLLFNEECLVGTSHQLVPITSLPFVHTARRYYRLNGSVRLRTGAGGLATTPRAGKLVKPGHLEEVKVVTRFP 123
BLAST of mRNA_C-tenellus_contig10369.1.1 vs. uniprot
Match: M2Y7R4_GALSU (Uncharacterized protein n=2 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y7R4_GALSU) HSP 1 Score: 112 bits (279), Expect = 1.410e-28 Identity = 70/138 (50.72%), Postives = 81/138 (58.70%), Query Frame = 1 Query: 19 MGGGAWPFLVDTLAHCLVNSSNKRGPCLLN-------------RGAYACT----WGNNRPVMPFDVLGRTRATLMHATRFV*PWSRDPGNLLNVHRDRDRSLQLLILNKEFLVNASHQLALITSLPFVHTAHHTYRLN 381 MGGGAWPFLV + CLVNS N+R LL RG + GNNR VMPFDVLG TRATLM + P+ R L +HR + + +N+EFLVNASHQLAL TSLPFVHTA +YRLN Sbjct: 1 MGGGAWPFLVGGVI-CLVNSVNERDLFLLTSYIVCEDIRYILLRGTIRFSRMEVLGNNRCVMPFDVLGCTRATLMRSNSCKRPFLRRVWQTLKLHRAVGLNTVTVFMNEEFLVNASHQLALNTSLPFVHTARRSYRLN 137
BLAST of mRNA_C-tenellus_contig10369.1.1 vs. uniprot
Match: A0A7R9S4B3_9CRUS (Hypothetical protein (Fragment) n=1 Tax=Argulus foliaceus TaxID=509924 RepID=A0A7R9S4B3_9CRUS) HSP 1 Score: 110 bits (275), Expect = 4.500e-28 Identity = 65/121 (53.72%), Postives = 80/121 (66.12%), Query Frame = 1 Query: 133 GNNRPVMPFDVLGRTRATLMHATRFV*PWSRDPGNLLNVHRDRDRSLQLLILNKEFLVNASHQLALITSLPFVHTAHHTYRLNVSVKILNRVAG---ASLLPHRGKLSELQYLEEGEAITR 486 GNNR VMP DVLGRTRATL +T P R PGN N+ RDRD LQL +N+EF V+ASH+LALITSLPFVHTA YRLN V+ +R ++ K+S+L +LEE + +TR Sbjct: 18 GNNRSVMPLDVLGRTRATLKESTWS--PSPRGPGNPRNLLRDRDWGLQLQPMNEEFPVSASHKLALITSLPFVHTARRYYRLNDLVRTSDRCPSWLFGAIRCSTMKISKLDHLEEVKVVTR 136
BLAST of mRNA_C-tenellus_contig10369.1.1 vs. uniprot
Match: A0A4C1WQY2_EUMVA (Uncharacterized protein n=1 Tax=Eumeta variegata TaxID=151549 RepID=A0A4C1WQY2_EUMVA) HSP 1 Score: 114 bits (285), Expect = 1.350e-27 Identity = 76/156 (48.72%), Postives = 96/156 (61.54%), Query Frame = 1 Query: 4 LFLDSMGGGAWPFLVDTLAHCLVNSSNKRGPCLLNRGAYACTWGNNRPVMPFDVLGRTRATLMHATRFV*PWSRDPGNLLNVHRDRDRSLQLLILNKEFLVNASHQLALITSLPFVHTAHHTYRLNVSVKILNRVAGA-SLLPHRGKLSELQYLEE 468 LFLDS+GGGAWPFLV A CLVNS N+R LLNR ++ G + V+ ++R +R PGN L + R D LQL +N+EFLV+ASH+LALITSLPFVHTA YRLN V+ +R A A S + GKL++L +LEE Sbjct: 125 LFLDSVGGGAWPFLVGG-AICLVNSGNERDSSLLNRRRHSGVRGVRVARLTGGVIKIFLEGPAASSRTRLSNNRGPGNPLKLLRAGDWGLQLSPINEEFLVSASHKLALITSLPFVHTARRYYRLNDLVRSSDRHAVALSAVGVAGKLTKLDHLEE 279
BLAST of mRNA_C-tenellus_contig10369.1.1 vs. uniprot
Match: L1IHC2_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IHC2_GUITC) HSP 1 Score: 105 bits (261), Expect = 3.390e-26 Identity = 65/125 (52.00%), Postives = 75/125 (60.00%), Query Frame = 1 Query: 19 MGGGAWPFLVDTLAHCLVNSSNKRGPCLLNRGAYACTWGNNRPVMPFDVLGRTRATLMHATRFV*PWSRDPGNLLNVHRDRDRSLQLLILNKEFLVNASHQLALITSLPFVHTAHHTYRLNVSVK 393 MGGGAWPFLV + CLVNS N+R LL + D G R T+ + P + G L+ VHRD DR LQLLI N+EFLV+ASHQLALITSLPFVHTA +YRLN VK Sbjct: 1 MGGGAWPFLVGGVI-CLVNSVNERDLSLLTS------------IANIDWRGLLRGTIC-----LDPEPKGLGKLVKVHRDGDRLLQLLIFNEEFLVSASHQLALITSLPFVHTARRSYRLNGPVK 107
BLAST of mRNA_C-tenellus_contig10369.1.1 vs. uniprot
Match: Q0PWU6_DIACI (Ac1147-like protein (Fragment) n=2 Tax=Psylloidea TaxID=33375 RepID=Q0PWU6_DIACI) HSP 1 Score: 104 bits (259), Expect = 6.990e-26 Identity = 58/97 (59.79%), Postives = 67/97 (69.07%), Query Frame = 1 Query: 136 NNRPVMPFDVLGRTRATLMHATRFV*PWSRDPGNLLNVHRDRDRSLQLLILNKEFLVNASHQLALITSLPFVHTAHHTYRLNVSVKILNRVAGASLL 426 NNR VMP DVLGRTRATL + R P R GN LN+ RDRDR LQ +N+EF V+ASH+LALITSLPFVHTA YRLN V+ +R A L+ Sbjct: 11 NNRSVMPLDVLGRTRATLKESARPT-PGPRGSGNPLNLLRDRDRGLQFFPVNEEFPVSASHKLALITSLPFVHTARRYYRLNDLVRSSDRCADGRLV 106
BLAST of mRNA_C-tenellus_contig10369.1.1 vs. uniprot
Match: K5WER6_AGABU (Uncharacterized protein n=9 Tax=Dikarya TaxID=451864 RepID=K5WER6_AGABU) HSP 1 Score: 103 bits (257), Expect = 1.020e-25 Identity = 54/86 (62.79%), Postives = 62/86 (72.09%), Query Frame = 1 Query: 136 NNRPVMPFDVLGRTRATLMHATRFV*PWSRDPGNLLNVHRDRDRSLQLLILNKEFLVNASHQLALITSLPFVHTAHHTYRLNVSVK 393 NNR VMP DVLGRTRATL F PW GNL+ + R DR+LQLL+ N+E+LV+ SHQLALITSLPFVHTA YRLN V+ Sbjct: 6 NNRSVMPLDVLGRTRATLTEPASFS-PWPEGLGNLVKLCRAGDRALQLLLFNEEYLVSVSHQLALITSLPFVHTARRYYRLNGLVR 90 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10369.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10369.1.1 >prot_C-tenellus_contig10369.1.1 ID=prot_C-tenellus_contig10369.1.1|Name=mRNA_C-tenellus_contig10369.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=65bp MGGGAWPFLVDTLAHCLVNSSNKRGPCLLNRGAYACTWGNNRPVMPFDVLback to top mRNA from alignment at C-tenellus_contig10369:13..810+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10369.1.1 ID=mRNA_C-tenellus_contig10369.1.1|Name=mRNA_C-tenellus_contig10369.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=798bp|location=Sequence derived from alignment at C-tenellus_contig10369:13..810+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10369:13..810+ >mRNA_C-tenellus_contig10369.1.1 ID=mRNA_C-tenellus_contig10369.1.1|Name=mRNA_C-tenellus_contig10369.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=195bp|location=Sequence derived from alignment at C-tenellus_contig10369:13..810+ (Choristocarpus tenellus KU2346)back to top |