mRNA_C-tenellus_contig10361.1.1 (mRNA) Choristocarpus tenellus KU2346
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-tenellus_contig10361.1.1 vs. uniprot
Match: A0A6H5KBH3_9PHAE (Protein-tyrosine-phosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KBH3_9PHAE) HSP 1 Score: 108 bits (271), Expect = 3.130e-25 Identity = 55/94 (58.51%), Postives = 66/94 (70.21%), Query Frame = 1 Query: 151 AAELSVGRAGGGPVQLSFIHFPIDDMSPASNTADLAALVENLTDCVLSHTVTYIHCWGGRGRTGLIAACLLGALYPDLKAEEALTRVDEYFRLR 432 AAE+ +G G L+F HFPI D+SPA NT LA LV+ L V S V +IHCW GRGRTGLIA+CLLG LYP+L AE++L RVD Y+R R Sbjct: 274 AAEVVLGARG--EEGLAFHHFPIPDLSPAENTEILAGLVDELEALVRSGKVPFIHCWAGRGRTGLIASCLLGRLYPELSAEQSLNRVDRYYRTR 365
BLAST of mRNA_C-tenellus_contig10361.1.1 vs. uniprot
Match: R1BR51_EMIHU (Protein-tyrosine-phosphatase n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BR51_EMIHU) HSP 1 Score: 94.7 bits (234), Expect = 7.280e-20 Identity = 58/141 (41.13%), Postives = 73/141 (51.77%), Query Frame = 1 Query: 13 QAEIPPQDKTSMWNQHGITTQS-QETSPSSISSVSGFQLYSEDAFSAAAELSVGRAGGGPVQLSFIHFPIDDMSPASNTADLAALVENLTDCVLSHTVTYIHCWGGRGRTGLIAACLLGALYPDLKAEEALTRVDEYFRLR 432 +AE+PPQ++ + W G+ QS +P + FQ Y DA P F+HFPI D A + L LV L+ L V YIHCWGGRGRTG++AACLLG+LY + AEEAL RV LR Sbjct: 290 RAELPPQEEAAAWPPGGVAGQSGNAVAPQTAR----FQPYRADA---------------PEGAQFLHFPIPDRGVADSPEALDGLVSELSRRALDGQVLYIHCWGGRGRTGMVAACLLGSLYRYVGAEEALQRVQRCLSLR 411
BLAST of mRNA_C-tenellus_contig10361.1.1 vs. uniprot
Match: A0A7S3T520_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3T520_9SPIT) HSP 1 Score: 88.6 bits (218), Expect = 4.030e-19 Identity = 53/124 (42.74%), Postives = 71/124 (57.26%), Query Frame = 1 Query: 13 QAEIPPQDKTSMWNQHGITTQSQETSPSSISSVSGFQLYSEDAFSAAAELSVGRAGGGPVQLSFIHFPIDDMSPASNTADLAALVENLTDCVLSHTVTYIHCWGGRGRTGLIAACLLGALYPDL 384 QAE+PPQD + + +T Q + + GF+ Y +DA AA + PV SF+HF I+DM PA+ +L VE+L VL V Y+HCWGG+GR GL+ ACLLG LYP+L Sbjct: 75 QAELPPQDSSPSFG-GAMTWQ--------YAPILGFESYVQDATYAAFD---------PV--SFVHFGINDMQPANELDELEKFVEHLAARVLQGEVLYVHCWGGKGRAGLVCACLLGLLYPEL 178
BLAST of mRNA_C-tenellus_contig10361.1.1 vs. uniprot
Match: R1E8P7_EMIHU (Protein-tyrosine-phosphatase n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1E8P7_EMIHU) HSP 1 Score: 88.2 bits (217), Expect = 1.710e-18 Identity = 56/141 (39.72%), Postives = 75/141 (53.19%), Query Frame = 1 Query: 13 QAEIPPQDKTSMWNQHGITTQSQETSPSSISSVSGFQLYSEDAFSAAAELSVGRAGGGPVQLSFIHFPIDDMSPASNTADLAALVENLTDCVLSHTVTYIHCWGGRGRTGLIAACLLGALYPDLKAEEALTRVDEYFRLRS 435 QAE+PPQD +++ G+ + + G + Y+ DA +AA E L F HF I DM PA + A L +LV L V + V Y+HCWGG+GR GL+ ACLL LY ++ AEEAL R Y LR+ Sbjct: 77 QAEVPPQDGSTVLG--GVA----------VEPLPGLEPYAADAAAAAPESP----------LKFAHFGIRDMHPADDVAALRSLVYELARRVRTGEVLYVHCWGGKGRAGLVCACLLAYLY-NIGAEEALVRTQVYCSLRN 194
BLAST of mRNA_C-tenellus_contig10361.1.1 vs. uniprot
Match: A0A7S2JZQ2_9STRA (Protein-tyrosine-phosphatase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JZQ2_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 5.750e-18 Identity = 41/80 (51.25%), Postives = 56/80 (70.00%), Query Frame = 1 Query: 202 FIHFPIDDMSPASNTADLAALVENLTDCVLS-HTVTYIHCWGGRGRTGLIAACLLGALYPDLK-AEEALTRVDEYFRLRS 435 F+H+ I DM+ A + L +V +L D + + H V Y+HCWGG+GR GLI+ACLLG LYPD+K A+EAL R+ Y +RS Sbjct: 6 FVHYGIVDMNTAVSLESLIYVVLHLADRIRNKHEVIYMHCWGGKGRAGLISACLLGVLYPDIKDADEALERIQAYCNVRS 85
BLAST of mRNA_C-tenellus_contig10361.1.1 vs. uniprot
Match: A0A7S0LRA0_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LRA0_9EUKA) HSP 1 Score: 83.2 bits (204), Expect = 5.200e-16 Identity = 40/78 (51.28%), Postives = 52/78 (66.67%), Query Frame = 1 Query: 202 FIHFPIDDMSPASNTADLAALVENLTDCVLSHTVTYIHCWGGRGRTGLIAACLLGALYPDLKAEEALTRVDEYFRLRS 435 F+ PI+D+ A + L V L D VL V Y+HC+ GRGRTGL+AACLLG LY +KA++AL RV Y+RLR+ Sbjct: 222 FVRLPIEDLQAAPSVQWLVQNVYALGDRVLGGEVLYLHCFAGRGRTGLVAACLLGVLYNGMKADDALERVSAYYRLRA 299
BLAST of mRNA_C-tenellus_contig10361.1.1 vs. uniprot
Match: F0Z7V7_DICPU (Protein-tyrosine-phosphatase n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0Z7V7_DICPU) HSP 1 Score: 80.9 bits (198), Expect = 1.760e-15 Identity = 43/107 (40.19%), Postives = 62/107 (57.94%), Query Frame = 1 Query: 118 FQLYSEDAFSAAAELSVGRAGGGPVQLSFIHFPIDDMSPASNTADLAALVENLTDCVLSHTVT--YIHCWGGRGRTGLIAACLLGALYPDLKAEEALTRVDEYFRLR 432 F+ Y ED A E +G ++FIHFPI+D A N+ +LA L+E L + + Y+HCW GRGRTG+++ACLLG LY + EAL R+ + ++ R Sbjct: 113 FRPYREDILKLAKEKGIGED-----YITFIHFPIEDGGIAENSEELADLIERLLELLSKDKSNKIYLHCWAGRGRTGIVSACLLGRLY-QVSGLEALRRIQDCYQQR 213
BLAST of mRNA_C-tenellus_contig10361.1.1 vs. uniprot
Match: D3BMS1_POLPP (TYR_PHOSPHATASE_2 domain-containing protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BMS1_POLPP) HSP 1 Score: 77.4 bits (189), Expect = 1.520e-14 Identity = 42/105 (40.00%), Postives = 61/105 (58.10%), Query Frame = 1 Query: 118 FQLYSEDAFSAAAELSVGRAGGGPVQLSFIHFPIDDMSPASNTADLAALVENLTDCVLSHTVTYIHCWGGRGRTGLIAACLLGALYPDLKAEEALTRVDEYFRLR 432 F+ Y ED AA+ ++ +L F+HFPI+D A N +L+ ++ L + + SH + Y+HCW GRGRTG+IAACLLG LY + EA R+ + R Sbjct: 88 FRPYQEDLKQIAAKKNI--------ELEFLHFPIEDGGVAENLDELSDFIDLLIEKLKSHRI-YLHCWAGRGRTGIIAACLLGRLY-QVSGLEACRRIQACYEQR 182
BLAST of mRNA_C-tenellus_contig10361.1.1 vs. uniprot
Match: Q55FR4_DICDI (Protein-tyrosine-phosphatase n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q55FR4_DICDI) HSP 1 Score: 77.8 bits (190), Expect = 2.360e-14 Identity = 41/105 (39.05%), Postives = 57/105 (54.29%), Query Frame = 1 Query: 118 FQLYSEDAFSAAAELSVGRAGGGPVQLSFIHFPIDDMSPASNTADLAALVENLTDCVLSHTVTYIHCWGGRGRTGLIAACLLGALYPDLKAEEALTRVDEYFRLR 432 F+ Y ED + E + ++F+HFPI+D A N DL L+E L + + Y+HCW GRGRTG+I ACLLG LY + EAL R + ++ R Sbjct: 129 FRPYREDILKLSKEKGIDVDS-----VTFVHFPIEDGGIAENNEDLVDLIERLLNLLSLDNKVYLHCWAGRGRTGIIGACLLGRLY-QVTGLEALRRTQDCYQQR 227
BLAST of mRNA_C-tenellus_contig10361.1.1 vs. uniprot
Match: A0A7S3AE84_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AE84_9EUKA) HSP 1 Score: 73.6 bits (179), Expect = 4.880e-14 Identity = 32/42 (76.19%), Postives = 37/42 (88.10%), Query Frame = 1 Query: 307 YIHCWGGRGRTGLIAACLLGALYPDLKAEEALTRVDEYFRLR 432 Y+HCWGGRGRTGLIAACLLGALY D++AEE+L RV Y+ LR Sbjct: 2 YLHCWGGRGRTGLIAACLLGALYGDMEAEESLQRVQCYYDLR 43 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10361.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10361.1.1 >prot_C-tenellus_contig10361.1.1 ID=prot_C-tenellus_contig10361.1.1|Name=mRNA_C-tenellus_contig10361.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=157bp ILPCQAEIPPQDKTSMWNQHGITTQSQETSPSSISSVSGFQLYSEDAFSAback to top mRNA from alignment at C-tenellus_contig10361:187..657+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10361.1.1 ID=mRNA_C-tenellus_contig10361.1.1|Name=mRNA_C-tenellus_contig10361.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=471bp|location=Sequence derived from alignment at C-tenellus_contig10361:187..657+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10361:187..657+ >mRNA_C-tenellus_contig10361.1.1 ID=mRNA_C-tenellus_contig10361.1.1|Name=mRNA_C-tenellus_contig10361.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=471bp|location=Sequence derived from alignment at C-tenellus_contig10361:187..657+ (Choristocarpus tenellus KU2346)back to top |