mRNA_C-tenellus_contig1036.1.1 (mRNA) Choristocarpus tenellus KU2346
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-tenellus_contig1036.1.1 vs. uniprot
Match: D8LKH4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKH4_ECTSI) HSP 1 Score: 250 bits (638), Expect = 3.670e-82 Identity = 116/162 (71.60%), Postives = 142/162 (87.65%), Query Frame = 1 Query: 1 VRERLRLIQKYISSLEYNYTGNSFFVKRKDRGFRHVTSTAKLIVREALPIQCVEAVFLGAYLTTDMKEVVRFPVCFKSMVDGQVFRHIILAVRSGNKWGALGISRRETLMYKDLRHTSFSGLLEDFRLSYARNWHKLEHVCVGFPFPHDVSSNLPIKWKVML 486 +R +L+ IQ YI+SLEYNYTG +FFVK+KDRGFRHVTSTAKLI+REALPIQCVEAVF+GAYLT DM EV RFPVCF+S +DG+V+RHI+LAVRSG KWG+LG+SRR+ LMYK+L++ FS L+ DFR SYA +WH+LE V VGFP PHD+SSN+ IKWKV++ Sbjct: 1 MRGKLKHIQSYITSLEYNYTGEAFFVKKKDRGFRHVTSTAKLIIREALPIQCVEAVFVGAYLTADMAEVDRFPVCFRSSLDGRVYRHIVLAVRSGGKWGSLGLSRRDKLMYKELKYDLFSKLVGDFRESYASSWHRLEQVWVGFPLPHDISSNVAIKWKVLV 162
BLAST of mRNA_C-tenellus_contig1036.1.1 vs. uniprot
Match: A0A6H5JJ50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ50_9PHAE) HSP 1 Score: 219 bits (558), Expect = 9.800e-70 Identity = 107/176 (60.80%), Postives = 129/176 (73.30%), Query Frame = 1 Query: 49 YNYTGNSFFVKRKDRGFRHVTSTAKLIVREALPIQCVEAVFLGAYLTTDMKE------------------------------VVRFPVCFKSMVDGQVFRHIILAVRSGNKWGALGISRRETLMYKDLRHTSFSGLLEDFRLSYARNWHKLEHVCVGFPFPHDVSSNLPIKWKVML 486 YNYTG +FFVK+KDRGFRHVTSTAK I+REALPIQCVEAVF+GAYLT DM E V RFPVCF+S +DG+V+RHI+LAVRSG KWG+LG+SRR+TLMYK+L++ FS L+ DFR SYA NWH+LE V VGFP PHD+SSN+ +KWKV++ Sbjct: 5 YNYTGEAFFVKKKDRGFRHVTSTAKQIIREALPIQCVEAVFVGAYLTADMAEAGPLFFQTLADSSTLSPYLRRFLLPGYMVGVDRFPVCFRSSLDGRVYRHIVLAVRSGGKWGSLGLSRRDTLMYKELKYELFSKLVGDFRESYASNWHRLEQVWVGFPLPHDISSNVAVKWKVLV 180
BLAST of mRNA_C-tenellus_contig1036.1.1 vs. uniprot
Match: A0A835YRP7_9STRA (Vasohibin-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRP7_9STRA) HSP 1 Score: 187 bits (475), Expect = 7.080e-57 Identity = 84/160 (52.50%), Postives = 119/160 (74.38%), Query Frame = 1 Query: 1 VRERLRLIQKYISSLEYNYTGNSFFVKRKDRGFRHVTSTAKLIVREALPIQCVEAVFLGAYLTTDMKEVVRFPVCFKSMVDGQVFRHIILAVRSGNKWGALGISRRETLMYKDLRHTSFSGLLEDFRLSYARNWHKLEHVCVGFPFPHDVSSNLPIKWKV 480 +R++L+ +QKYI + EYN+TG ++ +K RGF HV + A+ I+REALPIQCVEA FLGAYLT D+++V R+P+ FKS ++G RHI+LAV SG KWGALGISRR+ L YK+L+++S L+ +F +Y WH+L+ + +G P P + S N PI+WKV Sbjct: 31 LRDKLKQLQKYIEAFEYNHTGKCYYSTKKFRGFAHVANVAQDIMREALPIQCVEATFLGAYLTCDLRDVERYPLSFKSALEGHEHRHIVLAVTSGGKWGALGISRRDCLAYKELKYSSLGALVAEFAAAYTSCWHQLQAIYLGLPLPRNPSCNAPIRWKV 190
BLAST of mRNA_C-tenellus_contig1036.1.1 vs. uniprot
Match: A0A2D4BXV4_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BXV4_PYTIN) HSP 1 Score: 182 bits (463), Expect = 1.470e-52 Identity = 92/200 (46.00%), Postives = 127/200 (63.50%), Query Frame = 1 Query: 1 VRERLRLIQKYISSLEYNYTGNSFFVKRKDRGFRHVTSTAKLIVREALPIQCVEAVFLGAYLTTDMKEVVRFPVCFKSMVDGQVFRHIILAVRSGNKWGALGISRRETLMYKDLRHTSFSGLLEDFRLSYARNWHKLEHVCVGFPFPHDVSSNLPIKWKVMLAHVGEDQDWATAAANLDSYVACAPALLEKFTWSGCIPD 600 ++ RL +Q Y++SLEYNYTG +F K+R F+ + +TAK I E LPIQC+EAVFL AY+T + ++ RFP+ FKS V RHI+LAVR NKWGALG+SR E LMYK+LR S S L +DF + H + + VGFPFPHD+ S+ ++W+V+ V + +W+ A +LD+ A LL G +PD Sbjct: 42 IKTRLMAVQNYLNSLEYNYTGTLYFDVNKNRSFKSIVNTAKEIAAEMLPIQCLEAVFLAAYITANFPDLERFPLSFKSQAGNSVHRHIVLAVRHQNKWGALGLSRSERLMYKELRFNSLSELTQDFCHGFESVCHVVTKLHVGFPFPHDIHSSEKVEWRVLNVPV-DTVEWSHVATHLDAXAKEAGDLLAFRRAKGAMPD 240
BLAST of mRNA_C-tenellus_contig1036.1.1 vs. uniprot
Match: K3X8V2_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X8V2_GLOUD) HSP 1 Score: 179 bits (455), Expect = 3.030e-52 Identity = 93/201 (46.27%), Postives = 131/201 (65.17%), Query Frame = 1 Query: 1 VRERLRLIQKYISSLEYNYTGNSFFVKRKDRGFRHVTSTAKLIVREALPIQCVEAVFLGAYLTTDMKEVVRFPVCFKSMVDGQVFRHIILAVR-SGNKWGALGISRRETLMYKDLRHTSFSGLLEDFRLSYARNWHKLEHVCVGFPFPHDVSSNLPIKWKVMLAHVGEDQDWATAAANLDSYVACAPALLEKFTWSGCIPD 600 ++ RL IQ I++LEYNYTG +F K+R F+ + STAK IV E LPIQC+EAVFL +YLT + ++ RFP+ FKS+ V RHIILAVR NKWGALG+SR + LMYK+L++ S S L++DF + +H++ V VGFPF HD+ S+ ++W+VM + E +W AA + DS+ A +L G +P+ Sbjct: 39 IKTRLIGIQHVINTLEYNYTGTQYFDVNKNRSFKSIVSTAKDIVNETLPIQCLEAVFLASYLTANASDLERFPISFKSIAGTNVHRHIILAVRYQHNKWGALGLSRSDKLMYKELKYASLSELIQDFCHEFELLYHRVLKVYVGFPFSHDIHSSEKVEWRVMNISL-EFNEWTDAAQHFDSFAKDAVDILAYKKSKGVLPE 238
BLAST of mRNA_C-tenellus_contig1036.1.1 vs. uniprot
Match: A0A1Y1IHH0_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IHH0_KLENI) HSP 1 Score: 176 bits (445), Expect = 3.920e-50 Identity = 89/195 (45.64%), Postives = 126/195 (64.62%), Query Frame = 1 Query: 1 VRERLRLIQKYISSLEYNYTGNSFFVKRKDRGFRHVTSTAKLIVREALPIQCVEAVFLGAYLTTDMKEVVRFPVCFKSMVDGQVFRHIILAVRSGNKWGALGISRRETLMYKDLRHTSFSGLLEDFRLSYARNWHKLEHVCVGFPFPHDVSSNLPIKWKVMLAHVGEDQDWATAAANLDSYVACAPALLEKFTWS 585 +R+RLR IQ++ISS EYNYT ++F RK R + + T + I+R+ALPI+CVEAVFL LT+ + ++ R P+ FK+ VDGQ FRHI+L VR+G ++GALGISRR+ LM+KDL S + ++ DF+ SY R WH + + VG P HD S I W+ +L V + W LD + +CA L +K+ S Sbjct: 35 LRQRLRAIQQFISSFEYNYTPETYFNVRKKRPLKRIVDTGRQIIRDALPIKCVEAVFLALLLTSGL-DIDRIPLGFKTAVDGQEFRHIVLVVRNGGRYGALGISRRKELMFKDLVFNSLAAIVTDFKQSYERWWHTVLKIRVGLPVEHDAHSQNQICWRYLLLKVSS-RPWEECCTALDLHASCASKLWDKWVVS 227
BLAST of mRNA_C-tenellus_contig1036.1.1 vs. uniprot
Match: A0A5D6XNG0_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XNG0_9STRA) HSP 1 Score: 177 bits (449), Expect = 7.550e-50 Identity = 96/201 (47.76%), Postives = 131/201 (65.17%), Query Frame = 1 Query: 1 VRERLRLIQKYISSLEYNYTGNSFFVKRKDRGFRHVTSTAKLIVREALPIQCVEAVFLGAYLTTDMKEVVRFPVCFKSMVDGQVFRHIILAVRSGN-KWGALGISRRETLMYKDLRHTSFSGLLEDFRLSYARNWHKLEHVCVGFPFPHDVSSNLPIKWKVMLAHVGEDQDWATAAANLDSYVACAPALLEKFTWSGCIPD 600 ++ RL IQ IS+LEYNYTG +F K+R F+ + STAK I+ E LPIQC+EAVFLGAYLT E+ RFP+ FK++ G V RHI+LAVR + KWGALG+SR E LM K+L++ S S L++DF +A +H + V GFPF HD+ S+ ++W+VM + E WA AA +LD++ A +L G +PD Sbjct: 39 MKTRLAAIQHVISTLEYNYTGTLYFDVTKNRSFKSIVSTAKDILNEVLPIQCLEAVFLGAYLTASAPELERFPISFKTVAGGCVHRHIVLAVRHQHAKWGALGLSRSEKLMAKELKYASLSELVQDFCREFALLFHAVLKVYAGFPFSHDIHSSEKVEWRVMNLPL-EHATWADAAQHLDAFSKEALDILAFKRAKGELPD 238
BLAST of mRNA_C-tenellus_contig1036.1.1 vs. uniprot
Match: A0A250XAD1_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XAD1_9CHLO) HSP 1 Score: 171 bits (433), Expect = 2.870e-48 Identity = 88/204 (43.14%), Postives = 121/204 (59.31%), Query Frame = 1 Query: 1 VRERLRLIQKYISSLEYNYTGNSFFVKRKDRGFRHVTSTAKLIVREALPIQCVEAVFLGAYLTTDMKEVVRFPVCFKSMVDGQVFRHIILAVRSG--NKWGALGISRRETLMYKDLRHTSFSGLLEDFRLSYARNWHKLEHVCVGFPFPHDVSSNLPIKWKVMLAHVGEDQDWATAAANLDSYVACAPALLEKFTWSGCIPDHP 606 +RERL +QK I+S+EYN++ F+ KDR F + TA+ ++REA+PI+C+EAVFLGA LT + R P+ KS V+G+ +RHI+L + KWGALGISRRE LM+KDL S S L+ DF+ Y + WHKL +G PF HDV SN + W+ + ++WA A LD + L +F G P P Sbjct: 58 IRERLMSVQKVIASIEYNHSPGYFYNVSKDRPFSRIMDTAREVLREAMPIKCIEAVFLGALLTAGWEGTARMPLGLKSGVNGETYRHIVLVIHHAPSQKWGALGISRREELMFKDLAFDSLSELVADFKAGYEKWWHKLHKARIGLPFEHDVFSNSSVCWRYCSVSPAK-RNWAVCAGILDKFGEDYKLLASRFKVLGFAPPAP 260
BLAST of mRNA_C-tenellus_contig1036.1.1 vs. uniprot
Match: A0A7S2GDE6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GDE6_9STRA) HSP 1 Score: 161 bits (408), Expect = 5.430e-47 Identity = 77/126 (61.11%), Postives = 101/126 (80.16%), Query Frame = 1 Query: 10 RLRLIQKYISSLEYNYTGNSFFVKRKDRGFRHVTSTAKLIVREALPIQCVEAVFLGAYLTTDMKEVVRFPVCFKSMVDGQVFRHIILAVRSGNKWGALGISRRETLMYKDLRHTSFSGLLEDFRLS 387 RLR IQ+YI SLEYN+TG S++ R+DRG +HV TAK IVREALPIQCVEAVF+ +LTT M +++R P+ FKS DG +RHI+LAVR G+KWGALGISRR++LM+KDL+ +S + L+++F S Sbjct: 56 RLRAIQQYIKSLEYNHTGTSYYKLRRDRGLQHVILTAKEIVREALPIQCVEAVFVATHLTTGMADLLRIPISFKSTADGNTYRHIVLAVRYGDKWGALGISRRDSLMWKDLQFSSLAELIKNFEKS 181
BLAST of mRNA_C-tenellus_contig1036.1.1 vs. uniprot
Match: A0A1W0A7K4_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A7K4_9STRA) HSP 1 Score: 164 bits (414), Expect = 5.170e-45 Identity = 84/210 (40.00%), Postives = 125/210 (59.52%), Query Frame = 1 Query: 1 VRERLRLIQKYISSLEYNYTGNSFFVKRKDRGFRHVTSTAKLIVREALPIQCVEAVFLGAYLTTD----------MKEVVRFPVCFKSMVDGQVFRHIILAVRSGNKWGALGISRRETLMYKDLRHTSFSGLLEDFRLSYARNWHKLEHVCVGFPFPHDVSSNLPIKWKVMLAHVGEDQDWATAAANLDSYVACAPALLEKFTWSGCIPD 600 VR +L IQ Y+++LEYNYTG +F K R ++ + TAK I+ E+LPIQC+EAVF+ AYLT + ++V R P+ FKS G VFRHI+L ++ + WGALG+SR LM K+L++ +FS LL D+ +A+ H++ + VGFPF HD+ S+ ++W+V+ + D W AA D + L+ G +PD Sbjct: 38 VRSKLHAIQTYLNALEYNYTGKLYFNVNKHRSYKSIYGTAKEIIHESLPIQCLEAVFVAAYLTANGNTEYEGMNPNQQVDRVPISFKSRSGGTVFRHIVLGIKHQHMWGALGLSRNADLMNKELKYKNFSELLADYIEHFAKCCHEVTKIYVGFPFSHDIHSSEKVQWRVLNIKIS-DHPWDAVAAQFDLFTREHSELMSHLHRVGELPD 246 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig1036.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig1036.1.1 >prot_C-tenellus_contig1036.1.1 ID=prot_C-tenellus_contig1036.1.1|Name=mRNA_C-tenellus_contig1036.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=204bp VRERLRLIQKYISSLEYNYTGNSFFVKRKDRGFRHVTSTAKLIVREALPIback to top mRNA from alignment at C-tenellus_contig1036:2461..4870- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig1036.1.1 ID=mRNA_C-tenellus_contig1036.1.1|Name=mRNA_C-tenellus_contig1036.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2410bp|location=Sequence derived from alignment at C-tenellus_contig1036:2461..4870- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig1036:2461..4870- >mRNA_C-tenellus_contig1036.1.1 ID=mRNA_C-tenellus_contig1036.1.1|Name=mRNA_C-tenellus_contig1036.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=612bp|location=Sequence derived from alignment at C-tenellus_contig1036:2461..4870- (Choristocarpus tenellus KU2346)back to top |