Homology
BLAST of mRNA_C-tenellus_contig10356.1.1 vs. uniprot
Match:
D7FQ84_ECTSI (Glycerophosphocholine acyltransferase 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ84_ECTSI)
HSP 1 Score: 97.1 bits (240), Expect = 9.620e-19
Identity = 60/105 (57.14%), Postives = 75/105 (71.43%), Query Frame = 2
Query: 242 MLRTIFHELSVLATDADGVSEKLKANIIRQRERLRKVIEE--KGGKKLKSKFAEPLKRRKQEFRVKIRKVVTGDPTKRVRDHLREKRRQPPMIRFLDKAAFFVGV 550
+LR I ELS LA +ADGVSEK+K I RQR+RL +IEE K ++L+SK PL + +++F KIRK VTGDP K VR HL EKR +P ++R LDKAAF VGV
Sbjct: 50 LLRVINDELSSLAAEADGVSEKVKKIINRQRQRLDSLIEETSKAPRRLQSKITAPLDKHRRQFHGKIRKAVTGDPLKSVRLHLEEKRSKPFVMRMLDKAAFTVGV 154
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10356.1.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 1
0 1 Expect = 9.62e-19 / Id = 57.14 Sequence D7FQ84_ECTSI
Match Name E-value Identity Description
D7FQ84_ECTSI 9.620e-19 57.14 Glycerophosphocholine acyltransferase 1 n=2 Tax=Ec... [more]
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Stop 1 Start 1 Seed ortholog 2880.D7FQ84 PFAMs DUF2838 Model size 949 Max annot lvl 2759|Eukaryota KEGG ko ko:K07466 KEGG Pathway ko03030,ko03420,ko03430,ko03440,ko03460,map03030,map03420,map03430,map03440,map03460 KEGG Module M00288 Hectar predicted targeting category other localisation Exons 4 Evalue 2.31e-21 EggNOG OGs KOG2895@1|root,KOG2895@2759|Eukaryota Ec32 ortholog description Protein of unknown function DUF2838 Ec32 ortholog Ec-01_007080.1 Description lysophospholipid acyltransferase activity Cds size 459 COG category I BRITE ko00000,ko00001,ko00002,ko03000,ko03032,ko03400
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1680789127.1072195-UTR-C-tenellus_contig10356:230..381 1680789127.1072195-UTR-C-tenellus_contig10356:230..381 Choristocarpus tenellus KU2346 UTR C-tenellus_contig10356 231..381 + 1680789127.158428-UTR-C-tenellus_contig10356:3184..3523 1680789127.158428-UTR-C-tenellus_contig10356:3184..3523 Choristocarpus tenellus KU2346 UTR C-tenellus_contig10356 3185..3523 +
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1680789127.1193106-CDS-C-tenellus_contig10356:381..543 1680789127.1193106-CDS-C-tenellus_contig10356:381..543 Choristocarpus tenellus KU2346 CDS C-tenellus_contig10356 382..543 + 1680789127.1315558-CDS-C-tenellus_contig10356:864..939 1680789127.1315558-CDS-C-tenellus_contig10356:864..939 Choristocarpus tenellus KU2346 CDS C-tenellus_contig10356 865..939 + 1680789127.1408327-CDS-C-tenellus_contig10356:1849..1903 1680789127.1408327-CDS-C-tenellus_contig10356:1849..1903 Choristocarpus tenellus KU2346 CDS C-tenellus_contig10356 1850..1903 + 1680789127.1501467-CDS-C-tenellus_contig10356:3016..3184 1680789127.1501467-CDS-C-tenellus_contig10356:3016..3184 Choristocarpus tenellus KU2346 CDS C-tenellus_contig10356 3017..3184 +
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10356.1.1
>prot_C-tenellus_contig10356.1.1 ID=prot_C-tenellus_contig10356.1.1|Name=mRNA_C-tenellus_contig10356.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=153bp
MRMSGHRRSRSKSSPASDELLDSGWRSDSGMLRTIFHELSVLATDADGVS back to top mRNA from alignment at C-tenellus_contig10356:231..3523+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig10356.1.1 ID=mRNA_C-tenellus_contig10356.1.1|Name=mRNA_C-tenellus_contig10356.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3293bp|location=Sequence derived from alignment at C-tenellus_contig10356:231..3523+ (Choristocarpus tenellus KU2346)ATTGGTATTACATTGGTGGAATGTGGAATGTCACACCCACTCACTCTTTC
ATCATCATATTGGATAAGTAGCCTCAAGTACTACCCAAGAGTATTGTGTA
ATCCACCGCCTGCTTCAAATTGAGATAATACTCTTGGGGACTTGCTTGGA
A ATGAGGATGTCAGGGCACAGGCGTTCCAGATCAAAATCCTCACCTGCAA
GTGACGAGTTACTGGATAGTGGATGGAGGTCGGACTCGGGGATGTTACGA
ACGATCTTCCATGAACTATCCGTACTTGCCACAGACGCTGATGGTGTTAG
CGAGAAGCTGAAG GTGAGAATCAGATTTGGGTTGAACTCTTGACGTCTGG
ACAAACAAGTCCATTCTATGCATCGTCGCTTTGCAAAGTTTTATTTTTGG
ATATAGCTGTGTTCCAAAACCGTCCGTTTGGTTTGATCCATAACTTGTTT
TTGTCTTACTTCAGACTGAGGAGCATGTTGCACTCTTCCTATCTTTGGTT
ATTGTGGTATATCTTAGGCTTGACATAAGCTCTTCTTGTCTGATTTGGTT
GATTCTGCTCGATTTCACCTTCAATAGCAATGCTTTCTGGTGATGCCCTG
ACGTCGTGGTCCCCGAACTGGATGTTGTTGCTAGGCAAACATCATTCGTC
AACGGGAAAGGTTACGCAAAGTAATCGAGGAGAAGGGAGGCAAGAAGCTC
AAATCCAAG GTAAATTTGCAAAACAATGCGCTGAACGACACCCTGGCATA
ACTAAGAATTTGTGGAAGTAAGGTAGGGCACATCAAGACCAACTAATTCT
CGGCGCATTATTTGGAGCACGTTCTGTGTGGGACTGATTCACGCCCACGA
GCTGGAAATGTTCATTTCATATTTTTGCATCCTGGCTGATTTGCTATCAT
TTCGAAACACGTGAACAGGATTGTGGAATGGTATGTCCGCGTGTCCTGGT
AAGCAATGTATCCTGATAACGGTAGATGGAGTTATTCGGAGTCAAAGGAA
CGTTTGACAATATCCTAGCTTATGCAACATTTAGAAGAGGGGAATGAATT
ACCAGTGAACGAAAAGTGTTCACTCCCCTGAGATGAATAGTTGGCTGGCT
GATGTATAGTGCTATGAATTCCTCCCCTTCACAAATCTGAGATTATTTTT
GTACAACGTGGATGCAATAAAACCTTTCCAACGTCGTAGTCTGAATTAGT
CTGAATTAGTCTGAAGTAGTCTGAATTAGTTGAAGCCAATATCTCCACAG
TTATACTATGCTCATGATTGTGCCTAGAACGTAGATATCACTTGGTCATT
GCTGTTCAGTTTCATCTCCTTTTTTATACTTCAGAGCACTATTCATTATT
ATTTTTTTTTTTTAAGTAAACGAAAAGTACAAGCGCCACGGCTCACGTCA
TAGAGCAGATGCTGCAGGCGCACATTTCTGTGTCCAGAGCCCGTTTGCTA
ACCTACAGCTTGTCCCTTTGGATGGTTTTTTGATGTGCTATATCCAAAGA
GATTAATGCCGAATTCTACTCAGTCCACTCATCCTCCTTACCTCCAATAC
GGTGATTGCTTCTTTGTCCCTAAGCGTCATGGCAAACCTTGTCCCTGCCC
TCCTGGACCTTTCTCTCAGTTTGCAGAACCTTTGAAGAGGCGGAAGCAAG
AGTTTAGAGTGAAGATCCGAAAG GTGCAAACTGATGGTGTGTCCCTGGCG
ATGTTTCTTATTTTATTTTATTTTGGACTACAGAAAAAAATACCACACAT
GTGAAACTACAATTTGGACTACAGAATAGAAACTACAATTTGGCTGTGTG
GTTGATGTGGGGATTCCATTTTTATTTTCACATGTGGGGTGAGGAAAGAT
TCAAAGCAAGAGTTTATGGCAGTCGAAATATTATGACATAAACAAAACTC
TCGATTATGCAGCTGTGGGTGTTTGGGCTCTATTGCTGGTGAATGTTGTA
TGATATGCATATTCCCAAGACATGAGTACTTGTGTAACAGTGGTGACTCA
GGGCAGCATTTTTGGATATGGGTGCATGTGTGTATGTACTGAAAGAAAAC
ATGGCAGTGACATATTTTTGTTGTTGGGAAGAGTGGGTCTAGTTTGTCAC
AGTTGTGTTCTAGCATGTGCATATGCATTGGAATAAAAGATGGCGGTGAC
ATATTTTTGTTGTTGGGAAGATTGGGTCTAATTTGCCACAGTTGTGTTCT
GCTCTTCCTTTTCTTTTTGCTACTGTGCGGGTTGGTTATACTGTCAATGT
ACAACTTGCAAAAAAGTCAACCTAGCCTTTCCACCTGTAGTTGCGCTGAA
GCCCTAGTGGATGAAAAATATTTCTTTTTGTTACCTCTACTATCCATTAA
TTATTTTTTTATGCAGCAAGAGTGATTAGTGTTCTTACTGTATCCATTGC
TTACTAGAAGCGTGTTCATTTGACTTTAAAAGTACAACTCTAATTGTTGT
TGTGATGATGACTTCTTTTTTTTTTTGACTTTGAAAGTACAACTCTAATT
GTTGTTGTGATGATGACTTCTTTTTTTTTTTACTTTGAAAGTACAACTCT
AATTGTTGTTGTGATGATGACTTCTTTTTTTTTGACTTTGAAAGTACAAC
TCTAATTGTTGTTGTGATGATGACTTTTTTTTTTTTCGAAGTGTGTATTG
TTTCATACTTCAGTTCGAAATGTTAATAATTTGATGTCTCATTTTAATTT
GAAATGTTAATTTGATTTCGTATTTTATTTTGAAATGTTATTTTGATTTC
TATGATACCAAACATTTAACTTTTTCTTCTTCGCAGGTGGTGACAGGAGA
CCCTACCAAGCGTGTGAGAGACCACCTCAGGGAGAAGCGAAGGCAGCCCC
CGATGATCAGGTTCCTGGACAAGGCTGCCTTCTTTGTTGGAGTGAGAGAG
CTTGCTGACCATCAGAGGGAAATGAATAGATGTCAGAAAGCAATGACCAT
GTAG CTGTACCATCATGATTATCGGGTATATCTATCGGGTATATCTATCC
CCCACAATGTTCTTCTTCTCCGACCATAGGCACCTACTGATGAATGTTGA
CCTCCTCCTTGTATCCTCTTACGTTGACCTCTTACGTCTTATGTCCCCGT
GTTGCATTCTATTCATATGATAAGTGTGGCTTTAGAGATGTAAGTGTGCA
TAGGCTTTGCGTTTATCATCTCTCAACAAATCAATTCAAAATGCACATCA
AGGCAATCCTTCTTTCTGTCCATCCATCCATCCATCCATCCATCCCCCCA
TCTGTCGGTGGTGAAAGTCATACGTTTGTGTTCTTATTTTGTA back to top Coding sequence (CDS) from alignment at C-tenellus_contig10356:231..3523+
>mRNA_C-tenellus_contig10356.1.1 ID=mRNA_C-tenellus_contig10356.1.1|Name=mRNA_C-tenellus_contig10356.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=459bp|location=Sequence derived from alignment at C-tenellus_contig10356:231..3523+ (Choristocarpus tenellus KU2346) back to top