mRNA_C-tenellus_contig10314.2.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig10314.2.1
Unique NamemRNA_C-tenellus_contig10314.2.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig10314.2.1 vs. uniprot
Match: D7FNV4_ECTSI (Calcium channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNV4_ECTSI)

HSP 1 Score: 331 bits (848), Expect = 5.040e-104
Identity = 182/395 (46.08%), Postives = 251/395 (63.54%), Query Frame = 2
Query:   50 FPFHRIQALYAARLSVVYFVVFVILAAFFLAPLSLAFIFNVFRGGQQGIPQMEESIHLNSTAEAFWLLDENHTGKLPLSVLGALLMEVYHMRGISFGELCRMQELLEEATERQSTLQDGTEEPAIEIDTFRDAVNILDRNAVHVGWITEVEWFLPKVYHSRWFGDLIWVMKHKRVTVWPGMGCRQPVTVLVFDLLELCMLVASLGFI-LASSLSNCGAQLCIYDLPQMFLLAGFCFTSISLVAVYGWRNCTQRPEVMYGLVVVFLSVFTFFLMVIGLSEQWGVRVFHSLRIAHVVLLLKWVPRLAGLVQTLFHMMNRATIPASVMFAWFFLMAVLGVQLFGGLVCAPALAEGDQNCDGVYIPSNTYTESKYEVLNFNNTISAIVTLFVLLVVNDW 1231
            FP   + AL   R ++++F  FVIL  FFLAPLSLAFIFNVFRGGQ GIPQMEE I L STA AF LLD+  +G++  + +GA L+E++ MRG++  EL R+Q L++E   R        E P++ +  F+DAV++LDR+  H  WITE++W+ P++Y S  F  L  ++KHKRVT WPG       ++L+ D ++  +LV S   + LA S S        YD  Q+ ++A FC T     AV GW NC QRP   +  +V F SV    L+ +  +EQWG R+  +LR+ H+ L + ++PR+A L++TL  M  RA  PASV+ AW F MAVLG Q+FGG VC P LAE D++C G  + SNTYT++   +LNFN+  ++ VTL VL VVNDW
Sbjct:   70 FPTIMMTALDQVRATIIFFAFFVILNVFFLAPLSLAFIFNVFRGGQSGIPQMEEEIRLRSTAAAFTLLDDRQSGQVLSANMGAFLLELHSMRGVASRELSRLQGLIDEVGARTPE-----EAPSLTLQDFQDAVDVLDRSREHAEWITEIQWYYPQLYQSPGFRRLTRIVKHKRVTFWPGCCGTPQFSMLLIDAVDTFLLVMSFAALWLAKSFSASEHDSERYDWVQITIVASFCVTVGLRAAVRGWYNCLQRPTWAFSALVTFFSVVVLVLVFLVPAEQWGWRLLRALRVTHMALAMAFLPRMAFLIRTLLTMTKRAATPASVLLAWSFFMAVLGAQIFGGKVCVPELAENDESCLGTTVVSNTYTDTGLMLLNFNDVPTSFVTLLVLFVVNDW 459          
BLAST of mRNA_C-tenellus_contig10314.2.1 vs. uniprot
Match: A0A6H5KIA0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIA0_9PHAE)

HSP 1 Score: 327 bits (838), Expect = 4.330e-97
Identity = 179/395 (45.32%), Postives = 249/395 (63.04%), Query Frame = 2
Query:   50 FPFHRIQALYAARLSVVYFVVFVILAAFFLAPLSLAFIFNVFRGGQQGIPQMEESIHLNSTAEAFWLLDENHTGKLPLSVLGALLMEVYHMRGISFGELCRMQELLEEATERQSTLQDGTEEPAIEIDTFRDAVNILDRNAVHVGWITEVEWFLPKVYHSRWFGDLIWVMKHKRVTVWPGMGCRQPVTVLVFDLLELCMLVAS-LGFILASSLSNCGAQLCIYDLPQMFLLAGFCFTSISLVAVYGWRNCTQRPEVMYGLVVVFLSVFTFFLMVIGLSEQWGVRVFHSLRIAHVVLLLKWVPRLAGLVQTLFHMMNRATIPASVMFAWFFLMAVLGVQLFGGLVCAPALAEGDQNCDGVYIPSNTYTESKYEVLNFNNTISAIVTLFVLLVVNDW 1231
            FP   + AL   R ++V+F  FVIL  FFLAPLSLAFIFNVFRGGQ GIPQMEE I L STA AF LLD+  +G++  + +GA L+E++ MRG++  EL R+QEL++EA  R        E P++ +  F+DAV +++R+  H  WITE++W+ P++Y S  F  L  ++KHKRVT+WPG    +  ++LV D ++  +L  S +   LA S S        YD  Q+ ++A FC T     A  GW NC Q P   +  +V F SV    L ++    +WG R+  +LR+ H+ L + +VPR+A L++TL  M  RA  PASV+ AW F MAVLG Q+FGG VC P LAE D++C G  + SNTYT++   +LNFN+  ++ +TL VL VVNDW
Sbjct:  357 FPTIMMTALDQVRATIVFFAFFVILNVFFLAPLSLAFIFNVFRGGQSGIPQMEEEIRLRSTAAAFTLLDDRQSGQVSSANMGAFLLELHSMRGVASRELSRLQELIDEAGARTPE-----EAPSLTLQDFQDAVGVMERSREHAEWITEIQWYYPQLYQSHGFRRLTRIVKHKRVTLWPGFCGTRQFSMLVIDAVDTFVLAISFVALCLAKSFSAWDYDSERYDWVQISVVASFCVTVGLRAAARGWYNCLQSPTWAFSALVTFFSVVVLVLALLVPGAEWGWRLLRALRVTHMALAIAFVPRMAFLIRTLLTMTKRAATPASVLLAWSFFMAVLGTQIFGGKVCVPELAEDDESCLGTTVVSNTYTDTGLMLLNFNDVPTSFLTLLVLFVVNDW 746          
BLAST of mRNA_C-tenellus_contig10314.2.1 vs. uniprot
Match: W4GNX5_9STRA (EF-hand domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GNX5_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 2.470e-11
Identity = 95/408 (23.28%), Postives = 180/408 (44.12%), Query Frame = 2
Query:   50 FPFHRIQALYAARLSVVYFVVFVILAAFFLAPLSLAFIFNVFRGGQQGIPQMEESIHLNSTAEAFWLLDE-----NHTGKLPLSVLGALLMEVYHMRGISFGELCRMQELLEEATERQSTLQDGTEEPAIEIDTFRDAVNILDRN--AVHVGWITEVEWFLPKVYHSRWFGDLIWVMKHKRVTVWPGMGCRQPVTVLVFDLLELCMLVASLGFILASSLSNCGAQLCIYDLPQMFLLAGFCFTSISLVAVYG----WRNCTQRPEVMYGLVVVFLSVFTFFLMVIGLSEQWGVRVFHSLRIAHVVLLLKWVPRLAG---LVQTLFHMMNRATIPASVMFAWFFLMAVLGVQLFGGLVCAPALAEGDQNCDGVYIPSNTYTESKYEVLNFNNTISAIVTLFVLLVVNDW 1231
            FP   + A  A R++ ++F++F+    FFL  + LA IFN F    +    +  +I      +AF LL       +  G +PL +   +  E+   + +S  +  +M ++            D   +  I++D F    ++L+    A +V   +EVE + P V H+ WF     +++ +    W          VLV        ++ S G I   + S        +D  ++     + F  ++ + + G    W +   R + +  + VV + VFT+    +G +     ++     IA  + L + +  + G   ++ T F ++        ++F   ++ A+LG QLFGG + +P++          + P++ YT++ Y   NFN+  SAIVTLF L++VN+W
Sbjct:  132 FPDIMMPAYNANRVTCLFFMLFICFGLFFLMNIVLAVIFNNFARYTEAEASLRHAIRKEKLTQAFQLLATKQEAASRPGGIPLDMCVRMFDELNRCQHVSHIQTTKMHQVF--------AALDTNGDNEIQLDEFLHTCDVLEMLLFADNVSK-SEVELWCPVVAHAHWFATFATMIRSQSFE-WVVDAALVLNAVLV--------VIESSGVIYGHNTSTAD-HWAGWDHFEVAFTTLYVFEMMAKIVIDGTRRYWASVKNRFDCIITVAVVGVDVFTY----VGRASP-SPQLIKVFLIARCLRLFRLIINIRGYRVIITTWFRLLQFGMHLLLLLFCHMYIFALLGNQLFGGRI-SPSIMT-------THFPNDPYTQAGYMANNFNDMPSAIVTLFELILVNNW 507          
BLAST of mRNA_C-tenellus_contig10314.2.1 vs. uniprot
Match: A0A3L6VFT9_9STRA (EF-hand domain-containing protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VFT9_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 8.940e-11
Identity = 94/408 (23.04%), Postives = 176/408 (43.14%), Query Frame = 2
Query:   50 FPFHRIQALYAARLSVVYFVVFVILAAFFLAPLSLAFIFNVFRGGQQGIPQMEESIHLNSTAEAFWLLDE-----NHTGKLPLSVLGALLMEVYHMRGISFGELCRMQELLEEATERQSTLQDGTEEPAIEIDTFRDAVNILDRN--AVHVGWITEVEWFLPKVYHSRWFGDLIWVMKHKRVTVWPGMGCRQPVTVLVFDLLELCMLVASLGFILASSLSNCGAQLCIYDLPQMFLLAGFCFTSISLVAVYG----WRNCTQRPEVMYGLVVVFLSVFTFFLMVIGLSEQWGVRVFHSLRIAHVVLLLKWVPRLAG---LVQTLFHMMNRATIPASVMFAWFFLMAVLGVQLFGGLVCAPALAEGDQNCDGVYIPSNTYTESKYEVLNFNNTISAIVTLFVLLVVNDW 1231
            FP   + A  A R++ ++F++F+    FFL  + LA IFN F    +    +  +I      +AF LL       +  G +PL +   +  E+   + +S  +  +M ++            D   +  I++D F    ++L+    A +V   +EVE + P V H+ WF     +++ +    W          VLV        ++ S G I   + S        +D  ++     + F  ++ + + G    W +   R + +  + VV + VFT+    +G +     ++     IA  + L + +  + G   +  T F ++        ++F   ++ A+LG QLFGG +    +          + P++ YT++ Y   NFN+  SAIVTLF L++VN+W
Sbjct:  267 FPDIMMPAYNANRVTCLFFMLFICFGLFFLMNIVLAVIFNNFARYTEAEASLRHAIRKEKLTQAFQLLATKQEAASRPGGIPLDMCVRMFDELNRCQHVSHIQTTKMHQVF--------AALDTNGDNEIQLDEFLHTCDVLETLLFADNVSK-SEVELWCPVVAHAHWFATFASMIRSQSFE-WVVDAALVLNAVLV--------VIESSGVIYGHNTSTAD-HWAGWDHFEVAFTTLYVFEMMAKIVIDGTRRYWASVKNRFDCIITVAVVGVDVFTY----VGRASP-SPQLIKVFLIARCLRLFRLIINIRGYRVIFTTWFRLLQFGMHLLLLLFCHMYIFALLGNQLFGGRISPSVMT--------THFPNDPYTQAGYMANNFNDMPSAIVTLFELILVNNW 642          
BLAST of mRNA_C-tenellus_contig10314.2.1 vs. uniprot
Match: A0A485K9M2_9STRA (Aste57867_3428 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K9M2_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 1.420e-9
Identity = 98/412 (23.79%), Postives = 178/412 (43.20%), Query Frame = 2
Query:   50 FPFHRIQALYAARLSVVYFVVFVILAAFFLAPLSLAFIFNVFRGGQQGIPQMEESIHLNSTAEAFWLLDENH----TGKLPLSVLGALLMEVYHMRGISFGELCRMQELLEEATERQSTLQDGTEEPAIEIDTFRDAVNILD----RNAVHVGWITEVEWFLPKVYHS---RWFGDLIWVMKHKRVTVWPGMGCRQPVTVLVFDLLELCMLVASLGFILASSLSNCGAQLCI-YDLPQMFLLAGFCFTSISLVAVYG----WRNCTQRPEVMYGLVVVFLSVFTFFLMVIGLSEQ--WGVRVFHSLRIAHVVLLLKWVPRLAGLVQTLFHMMNRATIPASVMFAWFFLMAVLGVQLFGGLVCAPALAEGDQNCDGVYIPSNTYTESKYEVLNFNNTISAIVTLFVLLVVNDW 1231
            FP   + A    R   ++F++FV    FFL  + LA I N F    +    +   I +    +AF LLD+ H       +PL V   +  E+ H   ++  +  +M+E+ E          D + +  I+++ F +  ++L+     + VH    +EVE   P ++ S   + FG  +    H +   W          + V   L   ++V   G ++   LSN    +   +D  +    A + F  ++ + V G    W +   R + +  + VV + ++T++    G  +   + VR+F   R   +  L+  +     +  T F ++        ++F   ++ A+LG QLFGGL+ +PA+            P + YT   Y   NFN+   A+VTLF L++VN+W
Sbjct:  265 FPDIMMLAYNENRTVCLFFILFVCFGLFFLMNVVLAVIVNNFSRYTEAETTLRHGIRVQKLTQAFNLLDQIHKTPTADGIPLDVCVRMFEELNHCNNVAHIQKSKMREVFEAL--------DTSGDDEIQLNEFLNTCDVLEGMLFADDVHR---SEVEVCCPVLHASAGFQAFGRAV----HSKHFEW---------FIDVVLALNAVLIVVQSGNLIDGDLSNDEETVWQGWDAVEWVFTALYVFEMLAKLVVDGVRRYWASVKNRFDCIITVAVVAVDLYTYY----GAMDASPFLVRIFMIARCLRLFRLIVNIKGYRLIFTTWFRLLRFGIHLLMLLFCQMYIFALLGNQLFGGLI-SPAVMH-------TQFPDHPYTAVGYMANNFNDMPGAMVTLFELVLVNNW 640          
BLAST of mRNA_C-tenellus_contig10314.2.1 vs. uniprot
Match: A0A0D6R419_ARACU (Uncharacterized protein n=1 Tax=Araucaria cunninghamii TaxID=56994 RepID=A0A0D6R419_ARACU)

HSP 1 Score: 63.5 bits (153), Expect = 8.350e-7
Identity = 94/408 (23.04%), Postives = 170/408 (41.67%), Query Frame = 2
Query:   65 IQALYAARLSVVYFVVFVILAAFFLAPLSLAFIFNVFRGGQQGIPQMEESIHLNSTAEAFWLLDENHTGKLPLSVLGALLMEVYHMRGISFGELCRMQELLEEATERQSTLQDGTEEPAIEIDTFRD---AVNILDRNAVHVGWITEVEWFLPKVYHSRWFGDLIWVMKHKRVTVWPGMGCRQPVTVLVFDLLELCMLVASLGFILASS---LSNCGAQLCIYDLPQMFLLAGFCFTSISLVAV------YG----WRNCTQRPEVMYGLVVVFLSVFTFFL---MVIGLSEQWGVRVFHSLRIAHVVLLLKWVPRLAGLVQTLFHMMNRATIPASVMFAWFFLMAVLGVQLFGGLVCAPALAEGDQNCDGVYIPSNTYTESKYEVLNFNNTISAIVTLFVLLVVNDW 1231
            + A  ++R+S ++FV++++   +F+  L LA +++ F+          + +   +   AF LLD N  G L       L  E+   R +         ++ +E  +      D +++  I  + F D   ++++         W+       P  YHS                  P    R+ V    FD + + ML+ +L  ++  +   + N  AQ        ++    FCF  + +V +      YG    WR+   R +     ++V     TF     + I  + +W +R     R+  +  +L  +PR  G+V T F ++   T    ++F    L   LG QLFGGLV A     G+   +G  +      E++Y V NFN+  S +VTLF ++V+N+W
Sbjct:  279 LPAYESSRISCLFFVIYILFGVYFVTNLILAVVYDSFKKQLANQVAGMDDMRKKTLQTAFTLLDVNGRGFLDKQQCAQLFEELNKYRTLP--------KISKEDFDSIFYELDVSQDFQINKEEFSDLCESISLSFEKEPVPSWLESY----PYYYHSA-----------------PCTCVREFVKSKTFDYIIIFMLLLNLITVVIETTLDIQNNSAQF-------IWQKIEFCFGWLYVVEMALKIFSYGFDAYWRDGQNRFDFAITWIIVIGETLTFVFPHGLPILSNAEW-IRYLLIARLLRLTRILIRIPRYRGIVATFFTLIPSLTPYIGIIFCVMCLYCSLGSQLFGGLVYA-----GNPKLEGTSL-----LENEYLVFNFNDYPSGMVTLFNMMVMNNW 639          
BLAST of mRNA_C-tenellus_contig10314.2.1 vs. uniprot
Match: A0A485K7H5_9STRA (Aste57867_2414 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K7H5_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 2.490e-6
Identity = 105/443 (23.70%), Postives = 171/443 (38.60%), Query Frame = 2
Query:   50 FPFHRIQALYAARLSVVYFVVFVILAAFFLAPLSLAFIFNVFRGGQQGIPQMEESIHLNSTAEAFWLL---------------------DENHTGK------LPLSVLGALLMEVYHMRGISFGELCRMQELLEEATERQSTLQDGTEEPAIEIDTFRDAVNILDRNAVHVGWI-----TEVEWFLPKVYHSRWFGDLIWVMKHKRVTVWPGMGCRQPVTVLVFDLLELCMLVASLGFILASSLSNCGAQLCIYD-------LPQMFLLAGFCFTSISLVA--VYG----WRNCTQRPEVMYGLVVVFLSVFTFFLMVIGLSEQWG----VRVFHSLRIAHVVLLLKWVPRLAGLVQTLFHMMNRATIPASVMFAWFFLMAVLGVQLFGGLVCAPALAEGDQNCDGVYIPSNTYTESKYEVLNFNNTISAIVTLFVLLVVNDW 1231
            FP   + A    R++V++F  F+    FFL  + LA IF+ F    + +    +         AF LL                     DE   G+      +P +V+  L  ++ H + I++    RM+ LL         L D     +I    + D   I D   V +  +     +EVE + P V+ S W+  L                 R  V+   FDL+   +LV +   ++  +L        + D         Q+ L+  F +    LV   V G    W +   R + +  L ++ + ++ +      L E       V++    R   ++ LL  + R      T   ++         MF   +L A+LG+QLFGGL+    +            PS+ YT++ Y   NFN+  S IVTLF LLVVN+W
Sbjct:  251 FPDVMMPAYQQNRVAVLFFAFFLCFGLFFLMNVVLAVIFDHFARHVKVVHAQRDRTRRQKLQIAFDLLCPVSGPRRHMWSSKDLWDHRHDEWFMGEPAPHQGIPYNVMTRLCHQLNHYKNIAYIHPSRMRHLL--------ALMDTGHTQSIH---WADFERICDVWPVALRNLRDFKPSEVERWWPHVFQSTWYTTL-----------------RHAVSSPTFDLVVDIILVVNTVVVVVETLPILIDPAYVMDDDNKWGAWEQVELVFSFAYVVEGLVKMLVLGSSRYWASTQNRFDCILTLAILTVDIYVY------LPENAASIVLVKILLVARCLRLLRLLVRIKRYRVFCITWIRLLPFGKNVLLCMFCVMYLFALLGMQLFGGLISPDVMVS--------QFPSSPYTQANYTANNFNDVASGIVTLFELLVVNNW 651          
BLAST of mRNA_C-tenellus_contig10314.2.1 vs. uniprot
Match: A0A7S0P2Y0_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0P2Y0_9EUKA)

HSP 1 Score: 57.8 bits (138), Expect = 7.810e-6
Identity = 49/172 (28.49%), Postives = 77/172 (44.77%), Query Frame = 2
Query:  746 FCFTSISLVAVYGWRNCTQRPEVMYGLVVVF------LSVFTFFLMVIGLSEQWGVRVFH--SLRIAHVVL--LLKWVPRLAGLVQTLFHMMNRATIPASVMFAWFFLMAVLGVQLFGGLVCAPALAEGDQNCDGVYIPSNTYTESKYEVLNFNNTISAIVTLFVLLVVNDW 1231
            F    ++ V +  WR      +  + LVV F        +F    +  G S+Q      H  +L + H+ L  LL +VP    +++T   ++  A    S M    +  AVLG+  FGG++                + ++++  S Y   NFN+  S+IVTLF LLVVNDW
Sbjct:    5 FSLEMLAKVCLLPWRRLRSSRKHSFDLVVTFGACALTADIFNAGAIPSGGSQQLSAESLHRLALSLVHMRLARLLVYVPPFHKVLRTFALLLPSAAQLLSTMSVLLYCFAVLGMACFGGVITTDTSGARISADAAARLAASSFATSHYYPNNFNDLASSIVTLFELLVVNDW 176          
BLAST of mRNA_C-tenellus_contig10314.2.1 vs. uniprot
Match: A0A3R7BF32_9STRA (EF-hand domain-containing protein n=11 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7BF32_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 1.690e-5
Identity = 103/447 (23.04%), Postives = 181/447 (40.49%), Query Frame = 2
Query:   50 FPFHRIQALYAARLSVVYFVVFVILAAFFLAPLSLAFIFNVFRGGQQ----------------------GIPQMEESIH-LNSTAEAF----------------------WLLDENHTGK-LPLSVLGALLMEVYHMRGISFGELCRMQELLEEATERQSTLQ-DGTEEPA-IEIDTFRDAVNI-LDRNAVHVGWITEVEWFLPKVYHSRWFGDLIWVMKHKRVTVWPGMGCRQPVTVLVFDLLELCMLVASLGFILASSLSNCGAQLCIYDLPQMFLLAGFCFTSISLVAVYG----WRNCTQRPEVMYGLVVVFLSVFTFFLMVIGLSEQWGVRVFHSLRIAHVVLLLKWVPRLAGLVQTLFHMMNRATIPASVMFAWFFLMAVLGVQLFGGLVCAPALAEGDQNCDGVYIPSNTYTESKYEVLNFNNTISAIVTLFVLLVVNDW 1231
            FP   + A    RLSVV+F  F+    FFL  + LA IFN F    +                       I   + S+H +   + +F                      W L E    + +P +V+  L +++ H R I F +  +M+ L +       TL  DG      +E  +  D ++I L +        +E+E F P++Y S  F  +   ++HKR              + V  ++ + ++VA    +L     +   +L +++  ++     +       V VYG    W +   R + +  L+++ + V+ +       S    V+V    R   +  L+  + +      T F ++  A     +MF   ++ A+LG+Q FGGL+ +PA+     N        + YT+  Y   NFN+  S IVTLF L++VN+W
Sbjct:  294 FPDVMMPAYDKNRLSVVFFGFFLCFGVFFLLNVVLAVIFNNFSRNSKLSDARRQHTRVTKLQLAFDLLCHISSTDSSLHPIGGPSSSFRRAPTPVASYSAKDLWEHRHDDWFLGEPSVNEGVPWNVMERLFVQMNHYRHIGFLKRSKMRLLFD-------TLDADGDGVLTWVEFQSICDLLHIALTKRRARC---SEIERFWPRLYASSPFQAVARCVQHKRFET----------AIDVLLVVNMLLVVAESLPVLNGHAISVVLELNVWERLELVFSIVYLVELGLKVIVYGVSRYWSSMKNRFDGLLTLLILAVDVYVYLPEPNHDSSIVVVKVLLVARCLRLFRLIINIEQYRVFCMTWFRLLPFAKNLIVIMFCAMYMFALLGMQCFGGLI-SPAVMTTRFN-------DSAYTQDDYMANNFNDMASGIVTLFELIIVNNW 712          
BLAST of mRNA_C-tenellus_contig10314.2.1 vs. uniprot
Match: A0A6G0WW94_9STRA (EF-hand domain-containing protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WW94_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 2.270e-5
Identity = 91/404 (22.52%), Postives = 169/404 (41.83%), Query Frame = 2
Query:   50 FPFHRIQALYAARLSVVYFVVFVILAAFFLAPLSLAFIFNVFRGGQQGIPQMEESIHLNSTAEAFWLL---DENHTGK-LPLSVLGALLMEVYHMRGISFGELCRMQELLEEATERQSTLQDGTEEPAIEIDTFRDAVNILDRNAVHVGWI--TEVEWFLPKVYHSRWFGDLIWVMKHKRVTVWPGMGCRQPVTVLVFDLLELCMLVASLGFILASSLSNCGAQLCIYDLPQMFLLAGFCFTSISLVAVYGWRNCT----QRPEVMYGLVVVFLSVFTFFLMVIGLSEQWGVRVFHSLRIAHVVLLLKWVPRLAGLVQTLFHMMNRATIPASVMFAWFFLMAVLGVQLFGGLVCAPALAEGDQNCDGVYIPSNTYTESKYEVLNFNNTISAIVTLFVLLVVNDW 1231
            FP   + A    R + ++F++F+    FFL  + LA IFN F    +      ++   +   +AF +L   D++ + + +PL V   + +E+     ISF    +M ++L           D   +  IE+  F +  ++L+R       +  +E+E   P   H+  F      M H +   W   G      +LV        LV S   +    L+        ++  ++     +    +  + V G R        R + +  + VV + ++T        S Q  +RVF   R   +  L+  +     +  T F ++       +++F   ++ A+LG QLFGG + +PA+            P++ YT++ Y   NFN+   A+V+LF L++VN+W
Sbjct:  260 FPDVMMPAYNENRAACLFFIMFLCFGLFFLMNVVLAIIFNNFSRYSEVETASRQARRADKLTQAFHILAQIDKSSSDQVIPLDVCVRMFVELDRCHHISFMHKTKMHDILASL--------DTNGDNQIELSEFLETCDVLERLLFVDNQVFRSEMEICFPLFVHTTAFQSFR-EMVHCKAFEWFIDGALVVNAILV--------LVESSSVMYGDVLTEESTPWDGWNALEIAFTTLYVVEMVVKIIVDGSRKYLASGKNRFDCIITVAVVGIDLYTHAGSQPNRSPQL-IRVFLIARCLRLFRLIVHIKGYRVIFTTWFRLVKFGLHLVALLFCHMYIFALLGNQLFGGRI-SPAVMRAQ-------FPNDPYTQADYMANNFNDMPGAMVSLFELILVNNW 637          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10314.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
D7FNV4_ECTSI5.040e-10446.08Calcium channel n=1 Tax=Ectocarpus siliculosus Tax... [more]
A0A6H5KIA0_9PHAE4.330e-9745.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W4GNX5_9STRA2.470e-1123.28EF-hand domain-containing protein n=1 Tax=Aphanomy... [more]
A0A3L6VFT9_9STRA8.940e-1123.04EF-hand domain-containing protein n=7 Tax=Aphanomy... [more]
A0A485K9M2_9STRA1.420e-923.79Aste57867_3428 protein n=1 Tax=Aphanomyces stellat... [more]
A0A0D6R419_ARACU8.350e-723.04Uncharacterized protein n=1 Tax=Araucaria cunningh... [more]
A0A485K7H5_9STRA2.490e-623.70Aste57867_2414 protein n=1 Tax=Aphanomyces stellat... [more]
A0A7S0P2Y0_9EUKA7.810e-628.49Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A3R7BF32_9STRA1.690e-523.04EF-hand domain-containing protein n=11 Tax=Aphanom... [more]
A0A6G0WW94_9STRA2.270e-522.52EF-hand domain-containing protein n=2 Tax=Aphanomy... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig10314contigC-tenellus_contig10314:404..5609 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FNV4
PFAMsAA_permease,Ion_trans
Model size1779
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons7
Evalue3.65e-85
EggNOG OGsKOG2301@1|root,KOG2301@2759|Eukaryota
Descriptionmembrane depolarization during action potential
Cds size1032
COG categoryU
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig10314.2.1prot_C-tenellus_contig10314.2.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig10314 949..5407 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789125.7235472-UTR-C-tenellus_contig10314:403..9481680789125.7235472-UTR-C-tenellus_contig10314:403..948Choristocarpus tenellus KU2346UTRC-tenellus_contig10314 404..948 -
1680789125.7973096-UTR-C-tenellus_contig10314:5407..56091680789125.7973096-UTR-C-tenellus_contig10314:5407..5609Choristocarpus tenellus KU2346UTRC-tenellus_contig10314 5408..5609 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789125.73235-CDS-C-tenellus_contig10314:948..11221680789125.73235-CDS-C-tenellus_contig10314:948..1122Choristocarpus tenellus KU2346CDSC-tenellus_contig10314 949..1122 -
1680789125.743148-CDS-C-tenellus_contig10314:1790..19801680789125.743148-CDS-C-tenellus_contig10314:1790..1980Choristocarpus tenellus KU2346CDSC-tenellus_contig10314 1791..1980 -
1680789125.7513027-CDS-C-tenellus_contig10314:2930..30731680789125.7513027-CDS-C-tenellus_contig10314:2930..3073Choristocarpus tenellus KU2346CDSC-tenellus_contig10314 2931..3073 -
1680789125.7608607-CDS-C-tenellus_contig10314:3493..36071680789125.7608607-CDS-C-tenellus_contig10314:3493..3607Choristocarpus tenellus KU2346CDSC-tenellus_contig10314 3494..3607 -
1680789125.7687116-CDS-C-tenellus_contig10314:4163..43341680789125.7687116-CDS-C-tenellus_contig10314:4163..4334Choristocarpus tenellus KU2346CDSC-tenellus_contig10314 4164..4334 -
1680789125.7766209-CDS-C-tenellus_contig10314:4586..47821680789125.7766209-CDS-C-tenellus_contig10314:4586..4782Choristocarpus tenellus KU2346CDSC-tenellus_contig10314 4587..4782 -
1680789125.7880342-CDS-C-tenellus_contig10314:5363..54071680789125.7880342-CDS-C-tenellus_contig10314:5363..5407Choristocarpus tenellus KU2346CDSC-tenellus_contig10314 5364..5407 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig10314.2.1

>prot_C-tenellus_contig10314.2.1 ID=prot_C-tenellus_contig10314.2.1|Name=mRNA_C-tenellus_contig10314.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=344bp
MEESIHLNSTAEAFWLLDENHTGKLPLSVLGALLMEVYHMRGISFGELCR
MQELLEEATERQSTLQDGTEEPAIEIDTFRDAVNILDRNAVHVGWITEVE
WFLPKVYHSRWFGDLIWVMKHKRVTVWPGMGCRQPVTVLVFDLLELCMLV
ASLGFILASSLSNCGAQLCIYDLPQMFLLAGFCFTSISLVAVYGWRNCTQ
RPEVMYGLVVVFLSVFTFFLMVIGLSEQWGVRVFHSLRIAHVVLLLKWVP
RLAGLVQTLFHMMNRATIPASVMFAWFFLMAVLGVQLFGGLVCAPALAEG
DQNCDGVYIPSNTYTESKYEVLNFNNTISAIVTLFVLLVVNDW*
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mRNA from alignment at C-tenellus_contig10314:404..5609-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig10314.2.1 ID=mRNA_C-tenellus_contig10314.2.1|Name=mRNA_C-tenellus_contig10314.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=5206bp|location=Sequence derived from alignment at C-tenellus_contig10314:404..5609- (Choristocarpus tenellus KU2346)
GGGGGGGGGGCGGGGGCGGGGCTGACTGCGTGGGAATGCCCCGGGACTGT TCCCTTTCCACAGGATCCAAGCACTCTATGCTGCGCGGTTGTCCGTTGTC TACTTTGTGGTTTTTGTAATACTTGCAGCGTTTTTTCTGGCCCCTCTGTC GCTGGCCTTCATCTTCAATGTCTTTCGTGGTGGGCAGCAAGGCATACCGC AGATGGAGGAGTCCATACACCTCAACAGCACTGCGGAGGCGTTCTGGTGA GGAAAGTCCTAAGCACATCATGCCTGCAAGAAGAAAATGCTTGCGTTAGT TATCTGGGGCTCAGGTCTTGAACTCGGGTTGGTAACATGGCTGTGTCTGT TGTGTATGTACGTACGTTGGGCATGTTTTTCGTTCAGTCTTTGCGGTGGT GCTCTCAAGAAAAAAAAACTACACTCCAAGTGCTCAAACTTGGGAAAAAA AAACGAGGGCGTAAAATGTTAAGATTGTTCCGTGTTCATCCTCTTGCCCG TAGGAATGACTTTGTTGGTGGGACAAGGCAAGGTCCGCTTCACTTCTGAC TAAATGGTTGTGAGGTTGTGTCTATTGGTGTTACGCGGTATACCCTTCTT CTTGCCAAGTAATTAATGGAATAAAAAAAAAACATTCCTTGGTGTTGGGA TAATTTTTTTGTGCCTATCTTTTCAATCTTTTTTTCTTTTTTTTAACTGT TGAAAGTACGTTCAAGACCCACAGCTCTCTGAGCACTCCCATGCTCCTTC CCGATTTTAACCTCATTATTGAAGTCACGAAACAAAATAAATATGTTCCG ATTTGGATGTTGTAAACCGAGAAACAGGCTCTTGGATGAAAACCACACAG GAAAGCTCCCTTTATCTGTCTTGGGTGCCCTCCTCATGGAGGTCTATCAC ATGCGAGGCATTTCCTTTGGTGAGCTCTGCCGCATGCAGGAATTGTTAGA GGAGGCTACAGAGCGACAGTCAACGCTACAGGACGGGACGGAGGAGCCTG CGATTGAAATCGATACTTTCCGGGTGAAGTCTCCATAATTTATTAGTTGG ATGTTCTGTTTTTTCCAGGCGTGTGTTGCAGTTGTCGCTTTTGGGGCAGA GAGGGAAGATTGTGTTGTGTGGAGAGAGAGAGGGGGGGGGCTGTTTTCAC AGCGTGTTTAATTGTTCTGGTTGATTGATTTTTCTGGTTAGCCGGTAACA GAACATGGTACATGAAGCAGGGGTGGGGCTCACAATCAAGGCGTTGGTTT GTGTATGTGTTTGCCATGATGACAGGATGCAGTGAATATTCTTGACAGGA ATGCAGTGCATGTGGGATGGATCACGGAGGTGGAATGGTTCCTGCCCAAA GTGTACCATTCCAGGTGGTTTGGTGACCTGATCTGGGTGATGAAGCACAA GCGGGTCACTGTGTGGCCGGGGATGGGATGCCGTCAGCCCGTAACCGTGA GTGAACTTGCTACAGGGTATGTTTACTGCTACAGGGTATGTTTACTGCTA CAGGGTATGTTTACTGCTACGGGGTGTGTTTACTGCTACAGGGTATGTTT ACTGCTACGGGGTGTGTTTACTGGATCTTAATATTTGTCGTGTGTGGCTT TTTTTTATAGTGGAAAGTGGATGAGTCTTGGGAGTAACTTTGGAAGAGTT GTGCCTAGGTGTACTGCCGAGGACTTGCGTGTTGTACGGCTCTTCTGGTG CGCGGGGGTTGTGTCCTGTGACTGTGAGCTATTTGATCTCCTTTGGCTTT ACTGCGTTCTGTTTTGTCTGGTTGAAGATCAGGTGTGGGGCAATTAATTG AGAGAAAAAGAAAAGAAAAGAAAGATACGATGTAGCTGTTCCACAGCGAA GAGGTGGAGGCGGACGAATGCCGTTTGGTATTGCCTAGTGTACAGAGTCG TCTTTGAGAGAGGTAAGCGCAAAAGAGGACTGACTGCGCAAGTGACTGGC ATAATGGCAAGCCCTGCTGTGTTCGCCCTGCTCCGATGTTTTGTGCCTTC AGGTGCTGGTGTTCGATTTGCTGGAGCTGTGCATGCTCGTAGCTTCCCTA GGTTTTATTCTTGCAAGTTCACTTTCCAACTGCGGCGCACAGCTCTGCAT TTATGATCTACCACAGGTGGGGGGGGGCCCACCAGGTTTTGTTTATTTTT ATTTTTGTTGTCACTGCTCGGACTGAATGTACTCACGGAATGAATGCACT TTCCTCCCCCCCCCCAACCCCGGAAGACGCCTCTTTCTCCGGAAAAAATG CTTCTCCTTTCCATCAAATGGTGACGCGAAATATATGCCCGCTTTCTTCT CTGTTGTGCAGATTAGACTTTGAAGAGTTAGGAGCTATCTGTTGACAAGC GTTGACAAGTCACAGCATTTTTTGTTTGTTTTGTCAGAAATAACATGTGT ACTCTTCTTTCTCCATATTTATCTTCAACCTTAATCCAATCCTGCTCGCC ATGCATCCCTGGGCCTAACCCCCCCCACCCCACCCCACCCCACCCCACCC CTTCACTATCCAAACGCTGCTGTGGGTATCATGTAGATGTTCCTGCTGGC TGGGTTTTGCTTCACATCAATATCTTTGGTGGCAGTGTATGGCTGGCGGA ACTGCACGCAGAGGCCTGAGGTCATGTATGGCCTGGTTGTGGTCTTCCTG AGTGTTTTCACCTTTTTCCTGATGGTGATGTGAGATCAAAATCCAACCCT AACCCTAACGTCCCTTCCACAGTTCTGTGTTGCAACAACAACGACCAGTG TGTATAGGTTGTTTTGCGCGCAAGCTTGAAGGAAGTTGTGCCCGAACGGA GTATATATTGTTCCAACATTTTTTTGAGGGGAGGATACAGTATGGGGCCT CCTCTCTTTTGGTGTAGGTGTTGAGTGTCAGTTTTTTTTGTTGTTGAGGG TTGTGTGTTGTAGCCAGGGGATCCGGATTGTGTATCTCTGCAACCACTAG TTGAGCGGTGGCTTACCTGTCTGCCAGGGGGTCATGCCATACCTCAGAAG TCGCATTGACGTGTGCGGAACGTGAAATCTTACCTTTTTTTTTCAGCTGT GGTATCTTTCATTGTATCCTTAGTGACCGGGAGAGGGTTGAGGGCTATGG TAAAAATGAAGAAAGGGGGGTATGCACGTGGAGCTCGACTTCGTAAGAGG CAGGATGTGTGCTGTTGCTGAGCCAGAGGTGTGGGTCTGTCTCTTCACAC TGCTAAGAGAGGGTTCCAAATGTTTGAGAGGGCTTTTGTAGGCATTTTGA CGGCATTCCTGTTTTGATGCTGTGATTCGTGAAGCAGCTGTAGCGCCAAA GTTTGAAGCAATGACAAGACTCTTGGCTGCGATGACTGCAGCCGTTCCTT CTTGTTGATATCTACTTTTTTGTCCTCTAACAAATTAATTGTCTGCACCA TTTTTCCACACGTGTCATCTTGTACCATGTCCTCGAGGTGCCTTCGCGGG TTGGAGGAGCTTACCTCATTTCTGGTGTTGGTAACTTTCCTACATCGAAA AAGCTTTCGTGTATTATTGTACCCCACCTGTGTGTGTGTGTGTGTGCTCT TCTCTGACCTCTTCACACCCTGACCCTAAAACCCTATTATAATGCACTGG GGACGCATCGTGCTTCTGCTTGTATGTAGAGGCCTATCTGAACAATGGGG CGTAAGGGTCTTTCACTCTCTGCGCATTGCCCATGTGGTTCTGCTGCTCA AGTGGGTGCCTCGCCTGGCTGGCTTGGTGCAGACACTGTTTCACATGATG AATAGGGCTACCATACCGGCCAGCGTAATGTTTGCGTGGTTTTTTCTCAT GGCGGTGTTGGGTGTCCAGGTACGTACACGCCGGATGTTTGTGGACCAGA CTTTTCAGACTTTTTTTAGTTTCTTCTGATATGTAGCATGTGATCGACTG CGTGTTAAGTATGTTTCTCGTGGTATTGTTGCCGGTGAAGTTCTTCTGTG AGCAGAGGCGTTGTGGTTAGAGCTGTGCCCTTTGTGTCTCCGAACGCAAG CCTCGGTTTGTTTCGACTCTTTTTTAGTTGTTTTTTAATATTTGTTGGGG GACCCGGTTCTGATTGCGTAGCCTGTCTGTCTCCCACAGGAATATTTTAA TTGTTTACACGAATGATCTGTGCATCAAACTGTGCTGAAAGAATGTAGAG AGAGTAAAGTTGTATATGAGCGGAAACGTAGCCTCATATTTTTTTCAGGT TTCAGAACAATATGTTTGCCAAATAGTGAAGAAAAGTATTTTGTCACCTC AAAGAGTGGTCCTTACCACTTTCCCGCCAAACCTTTTTGTGTACTTCAAC TTAGTGCTGTAGGGTAAGGTGCATCTCTGCCATGACTACATGTGTTGGTA TATATCCAGATCCAGTCTTGATGTCTCGCCCACTTGATCCAAGTCTAAGT CTAACCCTAACCCTAACCCTGATCTGTTTTGCTTTTGTCGGTGTCACAAT GGATGGGTTGTCACACTGCACGTTTGGTGGCTTACAGCTTTTTGGTGGTT TGGTGTGTGCCCCAGCACTTGCCGAAGGGGATCAAAACTGTGATGGTGTG TACATCCCCTCCAACACCTACACAGAGAGCAAGTACGAAGTGCTTAACTT CAATAACACAATCTCTGCGATTGTCACCCTGTTTGTTCTCCTTGTTGTGA ATGACTGGTGAGATGGCTGCTCCTGCCCTTGTGTGCTAAGTGATGTTTGT GTTGCCGCGGCTATCAGAGGTTGTTTGGTGGGGTTAAGTGCTTCTGGAGG TGTAACTACCGCAGGTTTTCGAGGCATAGTGAAGCTGTTGTCATTCTTTT CATTGCTTGCCATCGATTGATTTGAAGGTTGTGCATTCCTTTTTTGAACA AAGTTTACTTGTTAAATTGCGTATCCTGTGAAAACATGTAATGTTACTTC GTGTTTTAACATTCTGTTAACAAACTTGCTGCAACTTCCGGTTGGTGGCT GCCCTTGCCCTTGTATGTACGATGCTTGGCATAGATCGTAACGGCACAAC TTTGCACTCCCCCCTCCCCCCCTTGTTGTTCCACCATGTATTCACGAACA TACTCGTTCATCCCCCTCTTTGTGCATGTCAATGCTCCAACACTGTCCTC TTCCTGTTGTGTTTACGTTACAGGTATGTTATTGTTGATGAGTTTGTCCA GGTCACGGGTTCGGGCTGGGCACGGTTGTACTTCATCCTAAACTATGTGA TTGGAG
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Coding sequence (CDS) from alignment at C-tenellus_contig10314:404..5609-

>mRNA_C-tenellus_contig10314.2.1 ID=mRNA_C-tenellus_contig10314.2.1|Name=mRNA_C-tenellus_contig10314.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=1032bp|location=Sequence derived from alignment at C-tenellus_contig10314:404..5609- (Choristocarpus tenellus KU2346)
ATGGAGGAGTCCATACACCTCAACAGCACTGCGGAGGCGTTCTGGCTCTT
GGATGAAAACCACACAGGAAAGCTCCCTTTATCTGTCTTGGGTGCCCTCC
TCATGGAGGTCTATCACATGCGAGGCATTTCCTTTGGTGAGCTCTGCCGC
ATGCAGGAATTGTTAGAGGAGGCTACAGAGCGACAGTCAACGCTACAGGA
CGGGACGGAGGAGCCTGCGATTGAAATCGATACTTTCCGGGATGCAGTGA
ATATTCTTGACAGGAATGCAGTGCATGTGGGATGGATCACGGAGGTGGAA
TGGTTCCTGCCCAAAGTGTACCATTCCAGGTGGTTTGGTGACCTGATCTG
GGTGATGAAGCACAAGCGGGTCACTGTGTGGCCGGGGATGGGATGCCGTC
AGCCCGTAACCGTGCTGGTGTTCGATTTGCTGGAGCTGTGCATGCTCGTA
GCTTCCCTAGGTTTTATTCTTGCAAGTTCACTTTCCAACTGCGGCGCACA
GCTCTGCATTTATGATCTACCACAGATGTTCCTGCTGGCTGGGTTTTGCT
TCACATCAATATCTTTGGTGGCAGTGTATGGCTGGCGGAACTGCACGCAG
AGGCCTGAGGTCATGTATGGCCTGGTTGTGGTCTTCCTGAGTGTTTTCAC
CTTTTTCCTGATGGTGATAGGCCTATCTGAACAATGGGGCGTAAGGGTCT
TTCACTCTCTGCGCATTGCCCATGTGGTTCTGCTGCTCAAGTGGGTGCCT
CGCCTGGCTGGCTTGGTGCAGACACTGTTTCACATGATGAATAGGGCTAC
CATACCGGCCAGCGTAATGTTTGCGTGGTTTTTTCTCATGGCGGTGTTGG
GTGTCCAGCTTTTTGGTGGTTTGGTGTGTGCCCCAGCACTTGCCGAAGGG
GATCAAAACTGTGATGGTGTGTACATCCCCTCCAACACCTACACAGAGAG
CAAGTACGAAGTGCTTAACTTCAATAACACAATCTCTGCGATTGTCACCC
TGTTTGTTCTCCTTGTTGTGAATGACTGGTGA
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