mRNA_C-tenellus_contig10304.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10304.1.1 vs. uniprot
Match: D8LEA3_ECTSI (Putative endonuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEA3_ECTSI) HSP 1 Score: 217 bits (553), Expect = 2.200e-65 Identity = 106/169 (62.72%), Postives = 136/169 (80.47%), Query Frame = 1 Query: 1 QKRVPQNVLERAALILDVLDRLYPNPPIPLNYINNFTFLCAVLLSAQTTDGKVNDVTIELFRVAPDPHSLSKMSHESLFHWSVLCPRSVGLAPTKAKHLIAMSDQLVERFGGEVPASFKDLESLPGVGHKTASVIMSQAFGIDAFPVDTHIHRLALRWGLSNSVKNVGR 507 ++ VP + E+AALI+ ++D+LYP+PPIP+N++++FT LC VLLSAQTTD +VN VT ELFRVAP+P SLSKM+HE L RSVGLAPTKAKHLIA+S Q+++RF G+VP +F+ L+SLPGVG KTA+V+M QAF AFPVDTHIHRLALRWGL+ + KN + Sbjct: 251 ERAVPPRLAEKAALIIQIMDKLYPDPPIPINHMDSFTLLCGVLLSAQTTDAQVNLVTQELFRVAPNPQSLSKMAHEDLQRTI----RSVGLAPTKAKHLIALSQQILDRFDGKVPQTFEGLQSLPGVGRKTAAVVMVQAFNTPAFPVDTHIHRLALRWGLTKNEKNASK 415
BLAST of mRNA_C-tenellus_contig10304.1.1 vs. uniprot
Match: A0A6H5JNP1_9PHAE (ENDO3c domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNP1_9PHAE) HSP 1 Score: 211 bits (537), Expect = 1.540e-62 Identity = 103/169 (60.95%), Postives = 134/169 (79.29%), Query Frame = 1 Query: 1 QKRVPQNVLERAALILDVLDRLYPNPPIPLNYINNFTFLCAVLLSAQTTDGKVNDVTIELFRVAPDPHSLSKMSHESLFHWSVLCPRSVGLAPTKAKHLIAMSDQLVERFGGEVPASFKDLESLPGVGHKTASVIMSQAFGIDAFPVDTHIHRLALRWGLSNSVKNVGR 507 ++ +P + E+AALI+ ++D+LYP+PPIP+N++++FT LC VLLSAQTTD +VN VT ELFRVAP+P SLSKM+ E L RSVGLAPTKAKHLIA+S Q+++RF G+VP +F+ L+SLPGVG KTA+V+M QAF AFPVDTHIHRLALRW L+ + KN + Sbjct: 303 ERAIPPRLAEKAALIIQIMDKLYPDPPIPINHLDSFTLLCGVLLSAQTTDAQVNLVTQELFRVAPNPQSLSKMAQEDLQQ----IIRSVGLAPTKAKHLIALSQQILDRFDGKVPQTFEGLQSLPGVGRKTAAVVMVQAFNTPAFPVDTHIHRLALRWELTKNEKNASK 467
BLAST of mRNA_C-tenellus_contig10304.1.1 vs. uniprot
Match: A0A835ZEQ0_9STRA (DNA glycosylase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEQ0_9STRA) HSP 1 Score: 200 bits (509), Expect = 1.610e-61 Identity = 102/155 (65.81%), Postives = 122/155 (78.71%), Query Frame = 1 Query: 43 ILDVLDRLYPNPPIPLNYINNFTFLCAVLLSAQTTDGKVNDVTIELFRVAPDPHSLSKMSHESLFHWSVLCPRSVGLAPTKAKHLIAMSDQLVERFGGEVPASFKDLESLPGVGHKTASVIMSQAFGIDAFPVDTHIHRLALRWGLSNSVKNVGR 507 + VLDRLYP PP+PLN+ + FT LCAVLLSAQTTDGKVN+VT ELF AP P +L+ MSH + S++ R+VGLAPTKA+HLIA + QL ERFGG VP + ++L++LPGVG KTASV+MS AFG+ AFPVDTHIHRLALRW LS S NV R Sbjct: 1 VQQVLDRLYPEPPMPLNHTDPFTLLCAVLLSAQTTDGKVNEVTTELFARAPTPRALAAMSHSDVL--SII--RTVGLAPTKARHLIATAQQLCERFGGAVPRTMEELQTLPGVGRKTASVVMSGAFGVPAFPVDTHIHRLALRWRLSRSETNVER 151
BLAST of mRNA_C-tenellus_contig10304.1.1 vs. uniprot
Match: A0A2S9XPU9_9DELT (Endonuclease III n=2 Tax=Enhygromyxa salina TaxID=215803 RepID=A0A2S9XPU9_9DELT) HSP 1 Score: 187 bits (475), Expect = 9.120e-57 Identity = 97/163 (59.51%), Postives = 121/163 (74.23%), Query Frame = 1 Query: 13 PQNVLERAALILDVLDRLYPNPPIPLNYINNFTFLCAVLLSAQTTDGKVNDVTIELFRVAPDPHSLSKMSHESLFHWSVLCPRSVGLAPTKAKHLIAMSDQLVERFGGEVPASFKDLESLPGVGHKTASVIMSQAFGIDAFPVDTHIHRLALRWGLSNSVKNV 501 P E+A IL +LD LYP+PPIPL + + FT L AVLLSAQTTD +VN+VT LF P P +++++S ++ H R++GLAPTKAK + A++ QLV+ FGGEVP F LESLPGVGHKTASV+M+QAFG+ AFP+DTHIHRLA RWGLS S KNV Sbjct: 7 PVTRAEKAQKILAILDELYPDPPIPLRHQDPFTLLIAVLLSAQTTDARVNEVTPALFNDGPTPATMAELSTATILHHI----RTLGLAPTKAKRVKALAQQLVDEFGGEVPRDFAGLESLPGVGHKTASVVMAQAFGVAAFPIDTHIHRLAARWGLS-SAKNV 164
BLAST of mRNA_C-tenellus_contig10304.1.1 vs. uniprot
Match: A0A7S3UM82_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UM82_HETAK) HSP 1 Score: 190 bits (483), Expect = 1.330e-55 Identity = 92/152 (60.53%), Postives = 124/152 (81.58%), Query Frame = 1 Query: 28 ERAALILDVLDRLYPNPPIPLNYINNFTFLCAVLLSAQTTDGKVNDVTIELFRVAPDPHSLSKMSHESLFHWSVLCPRSVGLAPTKAKHLIAMSDQLVERFGGEVPASFKDLESLPGVGHKTASVIMSQAFGIDAFPVDTHIHRLALRWGLS 483 +RA ++ +L+ +YPNPPIPL++ +NFTFLCAV++SAQTTDGKVN+V+ ELFR APDP +L+ + + + S++ P +GLAPTKA++L+AM+++LV GG VP F LE+LPGVGHKTASV+M+QAFG+ AFPVDTHI RLA+RWGLS Sbjct: 70 QRARSVMAILEHIYPNPPIPLDHTDNFTFLCAVIMSAQTTDGKVNEVSRELFRRAPDPAALAALGADRVL--SIIRP--LGLAPTKARNLVAMAEKLVAEHGGRVPRGFAALEALPGVGHKTASVLMAQAFGVPAFPVDTHIARLAVRWGLS 217
BLAST of mRNA_C-tenellus_contig10304.1.1 vs. uniprot
Match: A0A2M9A4C3_9BACT (Endonuclease III n=1 Tax=Hallerella succinigenes TaxID=1896222 RepID=A0A2M9A4C3_9BACT) HSP 1 Score: 182 bits (461), Expect = 4.390e-55 Identity = 93/156 (59.62%), Postives = 115/156 (73.72%), Query Frame = 1 Query: 19 NVLERAALILDVLDRLYPNPPIPLNYINNFTFLCAVLLSAQTTDGKVNDVTIELFRVAPDPHSLSKMSHESLFHWSVLCPRSVGLAPTKAKHLIAMSDQLVERFGGEVPASFKDLESLPGVGHKTASVIMSQAFGIDAFPVDTHIHRLALRWGLSN 486 N ERA + LD +YP+PPIPL + N FTFL AVLLSAQ TD KVN VT ELF +A P ++++ E + R GLAP K+KH+ A+S +L++ FGGEVP +F++LESLPGVGHKTASVIMSQA+GI AFPVDTHIHRLA+RW LS+ Sbjct: 2 NKKERAEFVGKTLDAIYPDPPIPLQFSNTFTFLVAVLLSAQCTDKKVNAVTPELFALADTPQKMAQIPTEKI----EAIIRPCGLAPAKSKHITALSQKLLQEFGGEVPKTFEELESLPGVGHKTASVIMSQAYGIPAFPVDTHIHRLAMRWKLSD 153
BLAST of mRNA_C-tenellus_contig10304.1.1 vs. uniprot
Match: A0A0S8BVH0_9DELT (Endonuclease III n=1 Tax=Myxococcales bacterium SG8_38 TaxID=1703407 RepID=A0A0S8BVH0_9DELT) HSP 1 Score: 181 bits (460), Expect = 7.720e-55 Identity = 95/156 (60.90%), Postives = 117/156 (75.00%), Query Frame = 1 Query: 19 NVLERAALILDVLDRLYPNPPIPLNYINNFTFLCAVLLSAQTTDGKVNDVTIELFRVAPDPHSLSKMSHESLFHWSVLCPRSVGLAPTKAKHLIAMSDQLVERFGGEVPASFKDLESLPGVGHKTASVIMSQAFGIDAFPVDTHIHRLALRWGLSN 486 N ++A I +LDRLYP PPIPL++ + FT L AV+LSAQTTD KVN+VT LF+ APDP S++ + E + R+VGLAPTKAK+L AM+ +LV+ GG+VPA + LE LPGVGHKTASV+M QAFG+ AFPVDTHIHRLA RWGLSN Sbjct: 2 NRRDKAERIGAILDRLYPEPPIPLHHRDPFTLLVAVMLSAQTTDKKVNEVTPALFQEAPDPESMAALPVERILELI----RTVGLAPTKAKNLQAMARKLVDEHGGKVPADIEALEELPGVGHKTASVLMCQAFGLPAFPVDTHIHRLAARWGLSN 153
BLAST of mRNA_C-tenellus_contig10304.1.1 vs. uniprot
Match: A0A850GEJ4_9DELT (Endonuclease III n=2 Tax=Pseudenhygromyxa sp. WMMC2535 TaxID=2712867 RepID=A0A850GEJ4_9DELT) HSP 1 Score: 182 bits (463), Expect = 8.510e-55 Identity = 93/155 (60.00%), Postives = 116/155 (74.84%), Query Frame = 1 Query: 19 NVLERAALILDVLDRLYPNPPIPLNYINNFTFLCAVLLSAQTTDGKVNDVTIELFRVAPDPHSLSKMSHESLFHWSVLCPRSVGLAPTKAKHLIAMSDQLVERFGGEVPASFKDLESLPGVGHKTASVIMSQAFGIDAFPVDTHIHRLALRWGLS 483 N E+AA IL +LD LYP+PPIPL + N FT L AVLLSAQTTD +VN+VT LF P P +++K+ + + +++GLAPTKAK + A++ QLV+ FGGEVP F+ LESLPGVGHKTASV+M+QAFG AFP+DTHIHRLA RWGLS Sbjct: 2 NRAEKAAKILGILDELYPSPPIPLTHENPFTLLVAVLLSAQTTDARVNEVTPALFADGPTPAAMAKLPEARILNHI----KTLGLAPTKAKRVKALAKQLVDEFGGEVPPHFEGLESLPGVGHKTASVVMAQAFGEPAFPIDTHIHRLAARWGLS 152
BLAST of mRNA_C-tenellus_contig10304.1.1 vs. uniprot
Match: A0A2E4WY91_9DELT (Endonuclease III n=2 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A2E4WY91_9DELT) HSP 1 Score: 181 bits (458), Expect = 1.500e-54 Identity = 94/158 (59.49%), Postives = 117/158 (74.05%), Query Frame = 1 Query: 28 ERAALILDVLDRLYPNPPIPLNYINNFTFLCAVLLSAQTTDGKVNDVTIELFRVAPDPHSLSKMSHESLFHWSVLCPRSVGLAPTKAKHLIAMSDQLVERFGGEVPASFKDLESLPGVGHKTASVIMSQAFGIDAFPVDTHIHRLALRWGLSNSVKNV 501 ++A I +L+RLYP PIPL++ N F L AVLLSAQ+TD KVN+VT LFR AP P ++ + E + H C R VGLAPTK+K++ +S QL++ GEVP SF+ LE+LPGVGHKTASV+MSQAFG+ AFPVDTHIHRLA RWGLS+ KNV Sbjct: 5 DKADRIAALLERLYPETPIPLDHDNPFELLIAVLLSAQSTDKKVNEVTPALFRKAPTPEAMIALGAEGILH----CIREVGLAPTKSKNVAKLSQQLIDEHDGEVPNSFEALEALPGVGHKTASVVMSQAFGVPAFPVDTHIHRLAARWGLSSG-KNV 157
BLAST of mRNA_C-tenellus_contig10304.1.1 vs. uniprot
Match: UPI000D075315 (endonuclease III n=1 Tax=Hallerella porci TaxID=1945871 RepID=UPI000D075315) HSP 1 Score: 179 bits (455), Expect = 3.560e-54 Identity = 93/156 (59.62%), Postives = 110/156 (70.51%), Query Frame = 1 Query: 19 NVLERAALILDVLDRLYPNPPIPLNYINNFTFLCAVLLSAQTTDGKVNDVTIELFRVAPDPHSLSKMSHESLFHWSVLCPRSVGLAPTKAKHLIAMSDQLVERFGGEVPASFKDLESLPGVGHKTASVIMSQAFGIDAFPVDTHIHRLALRWGLSN 486 N ERA I LD YPNPPIPL + N FTFL AV+LSAQ TD KVN VT LF +A P ++K+S E + R GLAP K+ H+ +S L+ F GEVP +F++LESLPGVGHKTASV+MSQAFG+ AFPVDTHIHRLA+RWGLSN Sbjct: 2 NKKERAEFIGKTLDEFYPNPPIPLQFSNTFTFLVAVVLSAQCTDKKVNSVTPALFALADSPEKMAKISQEKILE----IIRPCGLAPMKSAHIAELSKILLRDFHGEVPHTFEELESLPGVGHKTASVLMSQAFGMPAFPVDTHIHRLAMRWGLSN 153 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10304.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10304.1.1 >prot_C-tenellus_contig10304.1.1 ID=prot_C-tenellus_contig10304.1.1|Name=mRNA_C-tenellus_contig10304.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=175bp QKRVPQNVLERAALILDVLDRLYPNPPIPLNYINNFTFLCAVLLSAQTTDback to top mRNA from alignment at C-tenellus_contig10304:308..3772- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10304.1.1 ID=mRNA_C-tenellus_contig10304.1.1|Name=mRNA_C-tenellus_contig10304.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3465bp|location=Sequence derived from alignment at C-tenellus_contig10304:308..3772- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10304:308..3772- >mRNA_C-tenellus_contig10304.1.1 ID=mRNA_C-tenellus_contig10304.1.1|Name=mRNA_C-tenellus_contig10304.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=525bp|location=Sequence derived from alignment at C-tenellus_contig10304:308..3772- (Choristocarpus tenellus KU2346)back to top |