mRNA_C-tenellus_contig10301.1.4 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10301.1.4 vs. uniprot
Match: D7G2J8_ECTSI (AMP-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2J8_ECTSI) HSP 1 Score: 301 bits (771), Expect = 7.520e-94 Identity = 155/244 (63.52%), Postives = 184/244 (75.41%), Query Frame = 1 Query: 1 RNMSGVAGALDAVTSDIPLKEAVRYKKGNLKWTRSDVKKHTEALACGLLELGCKATFPFPPPTPELHQPGDTVAVWLPECSEKHIAQLAAARVGMVVAEVDPTLTSADAVGKVLEESGATVVLLEDKMISSLSEAVPELRHYSTSSGLPFRSARFPALRLCLHTGFDREPALHNFRSVLLYQPSPSPLTLVDGKVKGNLPLFTEYTAGKGGVPIKGATLSQNEVLETGKWETVGAILSKTYTEV 732 R + G+A +D V ++IP+KEAVRYKKGNLKWTRSDVK H+EALACGLLELGCKA GDT+A+WLPECSEKH+AQLAAAR+GMVVAEVDP L SA AV K+LEESGA VVL+E+ ++ SL EAVPELRHYST SGLPFRSA+ P+LRLC+HTG +RE AL +FRS LLY P SPL V+G++K + PL T ++ G GG P KG TLS EV+ W T+ AIL K Y EV Sbjct: 54 RFLGGLASKVDKVLAEIPMKEAVRYKKGNLKWTRSDVKSHSEALACGLLELGCKA--------------GDTMAMWLPECSEKHVAQLAAARIGMVVAEVDPKLGSAAAVEKILEESGAAVVLVEESVVPSLIEAVPELRHYSTDSGLPFRSAKLPSLRLCIHTGLEREAALLHFRSALLYTPPVSPLAQVNGQIKESAPLHTIFSEGTGGTPEKGKTLSHAEVVSLASWPTIAAILKKEYVEV 283
BLAST of mRNA_C-tenellus_contig10301.1.4 vs. uniprot
Match: A0A7S3XZ81_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZ81_HETAK) HSP 1 Score: 175 bits (443), Expect = 3.890e-46 Identity = 96/253 (37.94%), Postives = 146/253 (57.71%), Query Frame = 1 Query: 1 RNMSGVAGALDAVTSDIPLKEAVRYKKGNLKWTRSDVKKHTEALACGLLELGCKATFPFPPPTPELHQPGDTVAVWLPECSEKHIAQLAAARVGMVVAEVDPTLTSADAVGKVLEESGATVVLLEDKMISS-----LSEAVPELRHYSTSSGLPFRSARFPALRLCLHTGFDREPALHNFRSVLLYQPSPSPLT-----LVDGKVKGNLPLFTEYTAGKGGVPIKGATLSQNEVLETGKWETVGAILSKTYTE 729 R+++ +A +++ ++ KEAVRY N+KWTR DV+ T+ALA GLLE C PGD++AVWLPECSEKH+ QLAAA+ G+V A+ D ++ + +A+G L +SGA V++ ++ + L +A+PEL Y ++G PF S+ FP L+L +HTG+D HNF+ + P P P T ++ +K + PL+ +YT GG KG ++ L + +W V +IL K Y E Sbjct: 45 RSLASIASQINSAVAENEYKEAVRYTHKNIKWTRKDVQFQTDALANGLLEAACN--------------PGDSIAVWLPECSEKHVTQLAAAKAGLVFADFDLSIDTPEALGDALADSGAKVLIFNSELDAVNCGRVLFDAIPELSGYYNNTGAPFHSSSFPNLKLMIHTGYDSLAGFHNFKHL----PVPHPATGGKLGVILPHLKDDTPLYVKYTKDSGGKATKGEVMTHGTALSSKEWSVVKSILDKQYIE 279
BLAST of mRNA_C-tenellus_contig10301.1.4 vs. uniprot
Match: A0A7S2XZH5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZH5_9STRA) HSP 1 Score: 162 bits (410), Expect = 1.280e-41 Identity = 95/247 (38.46%), Postives = 143/247 (57.89%), Query Frame = 1 Query: 10 SGVAGALDAVTSDIPLKEAVRYKKGNLKWTRSDVKKHTEALACGLLELGCKATFPFPPPTPELHQPGDTVAVWLPECS-EKHIAQLAAARVGMVVAEVDPTLTSADAVGKVLEESGATVVLLEDK-----MISSLSEAVPELRHYSTSSGLPFRSARFPALRLCLHTGFDREPALHNFRSVLLYQPSPSPLTLVDGKVKGNLPLFTEYTAGKGGVPIKGATLSQNEVLETGKWETVGAILSKTYTEV 732 S +A L VT P+KEAVRY+ N K TR D+ ++ AL+ GLLEL C A P DT+ +WLP+ S EKH+A LAAA++G+ VA+V + +A+ +VL ++GA +++++ + + +L +AVPEL H++ G+PF S P LR+ HTG+D NF+ VL++ P S + + +K + PL+T YT G G+ +KG TL+ +VL W+ AIL Y EV Sbjct: 30 SSIAAQLKDVTDANPMKEAVRYQDKNFKCTREDIDAYSYALSNGLLEL-CVA-------------PNDTMVLWLPDDSAEKHVAMLAAAKMGVTVADVSQDVQKPEAIRQVLSDTGARMIMIDTEHPDYNYLHALVKAVPELLHFNDKHGVPFHSHTLPKLRMFFHTGYDVIKGFCNFKHVLMFNPGESQVPKILPFLKDDTPLYTPYTKGPDGMAVKGETLTNGQVLSHSAWKVHSAILGGQYVEV 262
BLAST of mRNA_C-tenellus_contig10301.1.4 vs. uniprot
Match: A0A7S2CY20_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CY20_9STRA) HSP 1 Score: 125 bits (315), Expect = 1.100e-28 Identity = 80/245 (32.65%), Postives = 133/245 (54.29%), Query Frame = 1 Query: 13 GVAGALDAVTSDIPLKEAVRYKKGNLKWTRSDVKKHTEALACGLLELGCKATFPFPPPTPELHQPGDTVAVWLP-ECSEKHIAQLAAARVGMVVAEVDPTLTSADAVGKVLEESGATVVLLE----DKMISS-LSEAVPELRHYSTSSGLPFRSARFPALRLCLHTGFDREPALHNFRSVLLYQPSPSPLTLVDGKVKGNLPLFTEYTAGKGGVPIKGA-TLSQNEVLETGKWETVGAILSKTYT 726 G+ L + P+ E V++ K NLKW+ +DVK++++A + GL++ G KA GD++AVWLP + +E + AAAR+G+++ E+D +++ ADA+ +L E+ ++ + D+ + L E +PEL+HY G FRS P+++ +H D P + NF+ ++Y P P+ L+ + PL YT+ + GA LSQ +V+ W TVGAIL K +T Sbjct: 39 GIQEKLATLVDAHPMMETVQFNKQNLKWSMADVKRYSDAFSSGLVDNGWKA--------------GDSLAVWLPADTAESLTVKFAAARIGLLLVEIDMSVSEADAIRSILVENNCKGLIYDLEAGDRHNTDILKEIMPELKHYDDKFGDQFRSRVVPSMKFIMHVNMDLIPGVGNFKYQMVYDPRPA---LIPPAPDLSAPLTVNYTSDT----LSGARVLSQEDVMTEQAWPTVGAILDKKFT 262
BLAST of mRNA_C-tenellus_contig10301.1.4 vs. uniprot
Match: B7G0K8_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G0K8_PHATC) HSP 1 Score: 122 bits (306), Expect = 2.820e-27 Identity = 91/265 (34.34%), Postives = 136/265 (51.32%), Query Frame = 1 Query: 1 RNMSGVAGA-LDAVTSDIPLKEAVRYKKGNLKWTRSDVKKHTEALACGLLELGCKATFPFPPPTPELHQPGDTVAVWLPE-CSEKHIAQLAAARVGMVVAEVDPTLTSAD------AVGKVLEESGATVVLLED-----KMISSLSEAVPELRHYSTSSGLPFRSARFPALRLCLHTGFDREPALHNFRSVLLYQPSPSPLTLVD-GKVKGNLPLFTEYTAGKGGVPIK-GATLSQNEVLETGKWETVGAILSKTYTEV*QTGII 750 R++S GA L A+T++ P + VRY+ N W+ V+ +++ALA GL+E QPGD V WLPE SE+ + Q A A+ G+V+ +DP L + D A+ K LE + A V++ ++ IS +PELR + S G+PF + RFP LR +HTGFD++ + PS + T VD K+ + PL E G GVP G TLS +V++ W T +L+K Y E+ G++ Sbjct: 34 RSLSTAVGAQLQALTTEYPHLDVVRYEHKNRVWSLQHVQYYSDALAIGLMENNL--------------QPGDVVLSWLPEHFSEQMVLQFACAKSGLVLYTLDPMLATTDREKAKEALAKALEITKANVLVSQEAGNDVNYISLGHSVIPELRIFDFSLGIPFITPRFPHLRFPIHTGFDQDDKEGWLPLRHMVVPSGNLETFVDPAKISKDTPLAGELLIGADGVPTGVGKTLSNEQVVKNKIWPTFAKVLAKEYHEIKGVGVV 284
BLAST of mRNA_C-tenellus_contig10301.1.4 vs. uniprot
Match: A0A2D4BQ85_PYTIN (AMP-binding domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BQ85_PYTIN) HSP 1 Score: 108 bits (269), Expect = 4.070e-22 Identity = 75/231 (32.47%), Postives = 112/231 (48.48%), Query Frame = 1 Query: 1 RNMSGVAGALDAVTSDIPLKEAVRYKKGNLKWTRSDVKKHTEALACGLLELGCKATFPFPPPTPELHQPGDTVAVWLPECSEKHIAQLAAARVGMVVAEVDPTLTSADAVGKVLEESGATVVLLEDKMISS-----LSEAVPELRHYSTSSGLPFRSARFPALRLCLHTGFDREPALHNFRSVLLYQPSPSPLTLVDGKVKGNLPLFTEYTAGKGGVPIKGATLSQNEVLE 678 R S V GALD +P KEA R K +L+W+ ++ + +A GL L QPGD +AVWLP +E + LAAA+ G+ +A +DP ++SA+ V VL +S A+ +L E K+ +SE PEL Y + + FR +F L + T D E + FR +++ P P + + V PL Y G P KG TL+ ++L+ Sbjct: 25 RAASTVGGALDEAVERLPHKEAFRSIKQDLRWSYKELDSFVQQVANGLNSLH--------------FQPGDVLAVWLPNNAENLVTHLAAAKAGLXLAVIDPEISSAEEVAFVLHDSKASGILYEPKIAGRNNSAVVSELFPELATYESRXEV-FRPKQFRNLHAVISTNTDYEQGVIPFREIMVNSPEPYTVAAMKKAVNEKTPLAVTYNRVAGQTPKKGETLTHADILK 240
BLAST of mRNA_C-tenellus_contig10301.1.4 vs. uniprot
Match: A0A8K1FL38_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FL38_PYTOL) HSP 1 Score: 104 bits (259), Expect = 8.170e-21 Identity = 74/231 (32.03%), Postives = 110/231 (47.62%), Query Frame = 1 Query: 1 RNMSGVAGALDAVTSDIPLKEAVRYKKGNLKWTRSDVKKHTEALACGLLELGCKATFPFPPPTPELHQPGDTVAVWLPECSEKHIAQLAAARVGMVVAEVDPTLTSADAVGKVLEESGATVVLLEDKMISSLSEAV-----PELRHYSTSSGLPFRSARFPALRLCLHTGFDREPALHNFRSVLLYQPSPSPLTLVDGKVKGNLPLFTEYTAGKGGVPIKGATLSQNEVLE 678 R S V GALD +P KEA R K +L+W+ ++ + + LA G L QPGD +AVWLP +E ++ LAAA+ G+ +A +DP ++SA+ V +LE++ A+ +L E K+ A+ PEL Y FR F L + TG E + FR + + P + V + PL +T G G P KGA L+ +VL+ Sbjct: 25 RAASTVGGALDEAVERLPHKEAFRSIKQDLRWSFKELDSYVQDLANGFNSLQL--------------QPGDVLAVWLPNNAENYVTHLAAAKAGLTLAVIDPEISSAEEVKYILEDTKASGILYEPKIGERNQSAIIAGLFPELATYGQRQEA-FRPKSFRHLHTVISTG-QYEEGVIPFRQIFVNSPESHTVAAVKQAISEKTPLAVTFTKGDGKTPKKGAVLTHGDVLK 239
BLAST of mRNA_C-tenellus_contig10301.1.4 vs. uniprot
Match: K3X788_GLOUD (AMP-binding domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X788_GLOUD) HSP 1 Score: 95.9 bits (237), Expect = 6.190e-18 Identity = 72/231 (31.17%), Postives = 112/231 (48.48%), Query Frame = 1 Query: 1 RNMSGVAGALDAVTSDIPLKEAVRYKKGNLKWTRSDVKKHTEALACGLLELGCKATFPFPPPTPELHQPGDTVAVWLPECSEKHIAQLAAARVGMVVAEVDPTLTSADAVGKVLEESGATVVLLEDKMIS-SLSEAV----PELRHYSTSSGLPFRSARFPALRLCLHTGFDREPALHNFRSVLLYQPSPSPLTLVDGKVKGNLPLFTEYTAGKGGVPIKGATLSQNEVLE 678 R S V GALD +P KEA+R K +L+W+ ++ + +A G L +PG+ +AVWLP +E I QLAAA+ G+ +A +DP +++A+ + +L +S A+ +L E K+ + +E V PEL Y + L FR F L + TGF+ + F V++ P + V V PL Y+ G P KG L+ +VL+ Sbjct: 25 RAASTVGGALDEAVERLPHKEALRSLKQDLRWSFKELNAIVDEVANGFHSLK--------------FEPGNVLAVWLPNNAESVITQLAAAKAGVTLAVIDPKVSTAEELEYILHDSKASGLLFEPKIAGRNQTEIVQGLFPELATYRENFRL-FRPKNFRNLHTVISTGFEPVEGIAQFHQVMVNAPEKHEVETVKQVVNEKTPLAVSYSKVNGQNPKKGEVLTHGDVLK 240
BLAST of mRNA_C-tenellus_contig10301.1.4 vs. uniprot
Match: A0A7X0H2B5_9SPHN (Fatty-acyl-CoA synthase n=2 Tax=unclassified Sphingopyxis TaxID=2614943 RepID=A0A7X0H2B5_9SPHN) HSP 1 Score: 87.0 bits (214), Expect = 3.700e-14 Identity = 70/243 (28.81%), Postives = 113/243 (46.50%), Query Frame = 1 Query: 16 VAGALDAVTSDIPLKEAVRYKKGNLKWTRSDVKKHTEALACGLLELGCKATFPFPPPTPELHQPGDTVAVWLPECSEKHIAQLAAARVGMVVAEVDPTLTSADAVGKVLEESGATVVLL-----EDKMISSLSEAVPELRHYSTSSGLPFRSARFPALRLCLHTGFDREPALHNFRSVLLYQPSPSPLTLVDGKVKGNLPLFTEYTAGKGGVPIKGATLSQNEVLETGKWETVGAILSKTYTE 729 + D + P EA+ + +++W+ ++K +A+A GLLE G K PGD V +W P C+E + QLA A+ G+++ ++P A+ + L + G T ++L I+ L E PEL TS+ R+AR P LRL + G F ++ P L D ++ +P+ ++T+G G P KGATLS +L G + VGA + T+ Sbjct: 19 IGDCFDRTVARHPDSEALVVRHQSVRWSWRELKARVDAVAAGLLERGLK--------------PGDRVGIWAPNCAEWVVVQLATAKAGLILVNINPAYRVAE-LDYALNKVGCTALILAPSHKSSDYIAMLGELAPEL---PTSTPGMLRAARLPDLRLVIALGGRDHAGCLPFDALASADTGP----LADVRLDPAMPVNIQFTSGTTGFP-KGATLSHRNILNNGAF--VGARIGLKATD 236
BLAST of mRNA_C-tenellus_contig10301.1.4 vs. uniprot
Match: UPI001FF5FBB5 (AMP-binding protein n=1 Tax=Sphingobium sp. MAH-33 TaxID=2933566 RepID=UPI001FF5FBB5) HSP 1 Score: 86.3 bits (212), Expect = 6.520e-14 Identity = 69/225 (30.67%), Postives = 104/225 (46.22%), Query Frame = 1 Query: 16 VAGALDAVTSDIPLKEAVRYKKGNLKWTRSDVKKHTEALACGLLELGCKATFPFPPPTPELHQPGDTVAVWLPECSEKHIAQLAAARVGMVVAEVDPTLTSAD---AVGKVLEESGATVVLLEDKMISSLSEAVPELRHYSTSSGLPFRSARFPALRLCLHTGFDREPALHNFRSV--LLYQPSPSPLTLVDGKVKGNLPLFTEYTAGKGGVPIKGATLSQNEVL 675 + ALD P K+A+ + GN++++ S++K T+ A GLL LG K PGD V +W P C+E IAQLA AR GM++ ++P A+ +GKV E A + K L+ + H+ G S PA R + G + P +F V L S + L + +K + P+ ++T+G G P KG TLS +L Sbjct: 22 IGEALDRAAQRWPDKDALVARHGNIRYSWSELKAATDDFAAGLLALGVK--------------PGDRVGIWAPNCAEWTIAQLATARAGMILVNINPAYRVAELEYTLGKV--EVRALICAASFKNSDYLAMTESFVTHFGEQPG-EIVSVDLPAFRYAIKIGGEPRPGWLDFSEVAGLRTAASETELASIAATLKADDPINIQFTSGTTGAP-KGVTLSHRNIL 228 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10301.1.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10301.1.4 >prot_C-tenellus_contig10301.1.4 ID=prot_C-tenellus_contig10301.1.4|Name=mRNA_C-tenellus_contig10301.1.4|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=243bp MSGVAGALDAVTSDIPLKEAVRYKKGNLKWTRSDVKKHTEALACGLLELGback to top mRNA from alignment at C-tenellus_contig10301:288..4037+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10301.1.4 ID=mRNA_C-tenellus_contig10301.1.4|Name=mRNA_C-tenellus_contig10301.1.4|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3750bp|location=Sequence derived from alignment at C-tenellus_contig10301:288..4037+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10301:288..4037+ >mRNA_C-tenellus_contig10301.1.4 ID=mRNA_C-tenellus_contig10301.1.4|Name=mRNA_C-tenellus_contig10301.1.4|organism=Choristocarpus tenellus KU2346|type=CDS|length=729bp|location=Sequence derived from alignment at C-tenellus_contig10301:288..4037+ (Choristocarpus tenellus KU2346)back to top |