mRNA_C-tenellus_contig10301.1.4 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig10301.1.4
Unique NamemRNA_C-tenellus_contig10301.1.4
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig10301.1.4 vs. uniprot
Match: D7G2J8_ECTSI (AMP-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2J8_ECTSI)

HSP 1 Score: 301 bits (771), Expect = 7.520e-94
Identity = 155/244 (63.52%), Postives = 184/244 (75.41%), Query Frame = 1
Query:    1 RNMSGVAGALDAVTSDIPLKEAVRYKKGNLKWTRSDVKKHTEALACGLLELGCKATFPFPPPTPELHQPGDTVAVWLPECSEKHIAQLAAARVGMVVAEVDPTLTSADAVGKVLEESGATVVLLEDKMISSLSEAVPELRHYSTSSGLPFRSARFPALRLCLHTGFDREPALHNFRSVLLYQPSPSPLTLVDGKVKGNLPLFTEYTAGKGGVPIKGATLSQNEVLETGKWETVGAILSKTYTEV 732
            R + G+A  +D V ++IP+KEAVRYKKGNLKWTRSDVK H+EALACGLLELGCKA              GDT+A+WLPECSEKH+AQLAAAR+GMVVAEVDP L SA AV K+LEESGA VVL+E+ ++ SL EAVPELRHYST SGLPFRSA+ P+LRLC+HTG +RE AL +FRS LLY P  SPL  V+G++K + PL T ++ G GG P KG TLS  EV+    W T+ AIL K Y EV
Sbjct:   54 RFLGGLASKVDKVLAEIPMKEAVRYKKGNLKWTRSDVKSHSEALACGLLELGCKA--------------GDTMAMWLPECSEKHVAQLAAARIGMVVAEVDPKLGSAAAVEKILEESGAAVVLVEESVVPSLIEAVPELRHYSTDSGLPFRSAKLPSLRLCIHTGLEREAALLHFRSALLYTPPVSPLAQVNGQIKESAPLHTIFSEGTGGTPEKGKTLSHAEVVSLASWPTIAAILKKEYVEV 283          
BLAST of mRNA_C-tenellus_contig10301.1.4 vs. uniprot
Match: A0A7S3XZ81_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZ81_HETAK)

HSP 1 Score: 175 bits (443), Expect = 3.890e-46
Identity = 96/253 (37.94%), Postives = 146/253 (57.71%), Query Frame = 1
Query:    1 RNMSGVAGALDAVTSDIPLKEAVRYKKGNLKWTRSDVKKHTEALACGLLELGCKATFPFPPPTPELHQPGDTVAVWLPECSEKHIAQLAAARVGMVVAEVDPTLTSADAVGKVLEESGATVVLLEDKMISS-----LSEAVPELRHYSTSSGLPFRSARFPALRLCLHTGFDREPALHNFRSVLLYQPSPSPLT-----LVDGKVKGNLPLFTEYTAGKGGVPIKGATLSQNEVLETGKWETVGAILSKTYTE 729
            R+++ +A  +++  ++   KEAVRY   N+KWTR DV+  T+ALA GLLE  C               PGD++AVWLPECSEKH+ QLAAA+ G+V A+ D ++ + +A+G  L +SGA V++   ++ +      L +A+PEL  Y  ++G PF S+ FP L+L +HTG+D     HNF+ +    P P P T     ++   +K + PL+ +YT   GG   KG  ++    L + +W  V +IL K Y E
Sbjct:   45 RSLASIASQINSAVAENEYKEAVRYTHKNIKWTRKDVQFQTDALANGLLEAACN--------------PGDSIAVWLPECSEKHVTQLAAAKAGLVFADFDLSIDTPEALGDALADSGAKVLIFNSELDAVNCGRVLFDAIPELSGYYNNTGAPFHSSSFPNLKLMIHTGYDSLAGFHNFKHL----PVPHPATGGKLGVILPHLKDDTPLYVKYTKDSGGKATKGEVMTHGTALSSKEWSVVKSILDKQYIE 279          
BLAST of mRNA_C-tenellus_contig10301.1.4 vs. uniprot
Match: A0A7S2XZH5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZH5_9STRA)

HSP 1 Score: 162 bits (410), Expect = 1.280e-41
Identity = 95/247 (38.46%), Postives = 143/247 (57.89%), Query Frame = 1
Query:   10 SGVAGALDAVTSDIPLKEAVRYKKGNLKWTRSDVKKHTEALACGLLELGCKATFPFPPPTPELHQPGDTVAVWLPECS-EKHIAQLAAARVGMVVAEVDPTLTSADAVGKVLEESGATVVLLEDK-----MISSLSEAVPELRHYSTSSGLPFRSARFPALRLCLHTGFDREPALHNFRSVLLYQPSPSPLTLVDGKVKGNLPLFTEYTAGKGGVPIKGATLSQNEVLETGKWETVGAILSKTYTEV 732
            S +A  L  VT   P+KEAVRY+  N K TR D+  ++ AL+ GLLEL C A             P DT+ +WLP+ S EKH+A LAAA++G+ VA+V   +   +A+ +VL ++GA +++++ +      + +L +AVPEL H++   G+PF S   P LR+  HTG+D      NF+ VL++ P  S +  +   +K + PL+T YT G  G+ +KG TL+  +VL    W+   AIL   Y EV
Sbjct:   30 SSIAAQLKDVTDANPMKEAVRYQDKNFKCTREDIDAYSYALSNGLLEL-CVA-------------PNDTMVLWLPDDSAEKHVAMLAAAKMGVTVADVSQDVQKPEAIRQVLSDTGARMIMIDTEHPDYNYLHALVKAVPELLHFNDKHGVPFHSHTLPKLRMFFHTGYDVIKGFCNFKHVLMFNPGESQVPKILPFLKDDTPLYTPYTKGPDGMAVKGETLTNGQVLSHSAWKVHSAILGGQYVEV 262          
BLAST of mRNA_C-tenellus_contig10301.1.4 vs. uniprot
Match: A0A7S2CY20_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CY20_9STRA)

HSP 1 Score: 125 bits (315), Expect = 1.100e-28
Identity = 80/245 (32.65%), Postives = 133/245 (54.29%), Query Frame = 1
Query:   13 GVAGALDAVTSDIPLKEAVRYKKGNLKWTRSDVKKHTEALACGLLELGCKATFPFPPPTPELHQPGDTVAVWLP-ECSEKHIAQLAAARVGMVVAEVDPTLTSADAVGKVLEESGATVVLLE----DKMISS-LSEAVPELRHYSTSSGLPFRSARFPALRLCLHTGFDREPALHNFRSVLLYQPSPSPLTLVDGKVKGNLPLFTEYTAGKGGVPIKGA-TLSQNEVLETGKWETVGAILSKTYT 726
            G+   L  +    P+ E V++ K NLKW+ +DVK++++A + GL++ G KA              GD++AVWLP + +E    + AAAR+G+++ E+D +++ ADA+  +L E+    ++ +    D+  +  L E +PEL+HY    G  FRS   P+++  +H   D  P + NF+  ++Y P P+   L+      + PL   YT+      + GA  LSQ +V+    W TVGAIL K +T
Sbjct:   39 GIQEKLATLVDAHPMMETVQFNKQNLKWSMADVKRYSDAFSSGLVDNGWKA--------------GDSLAVWLPADTAESLTVKFAAARIGLLLVEIDMSVSEADAIRSILVENNCKGLIYDLEAGDRHNTDILKEIMPELKHYDDKFGDQFRSRVVPSMKFIMHVNMDLIPGVGNFKYQMVYDPRPA---LIPPAPDLSAPLTVNYTSDT----LSGARVLSQEDVMTEQAWPTVGAILDKKFT 262          
BLAST of mRNA_C-tenellus_contig10301.1.4 vs. uniprot
Match: B7G0K8_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G0K8_PHATC)

HSP 1 Score: 122 bits (306), Expect = 2.820e-27
Identity = 91/265 (34.34%), Postives = 136/265 (51.32%), Query Frame = 1
Query:    1 RNMSGVAGA-LDAVTSDIPLKEAVRYKKGNLKWTRSDVKKHTEALACGLLELGCKATFPFPPPTPELHQPGDTVAVWLPE-CSEKHIAQLAAARVGMVVAEVDPTLTSAD------AVGKVLEESGATVVLLED-----KMISSLSEAVPELRHYSTSSGLPFRSARFPALRLCLHTGFDREPALHNFRSVLLYQPSPSPLTLVD-GKVKGNLPLFTEYTAGKGGVPIK-GATLSQNEVLETGKWETVGAILSKTYTEV*QTGII 750
            R++S   GA L A+T++ P  + VRY+  N  W+   V+ +++ALA GL+E                 QPGD V  WLPE  SE+ + Q A A+ G+V+  +DP L + D      A+ K LE + A V++ ++       IS     +PELR +  S G+PF + RFP LR  +HTGFD++          +  PS +  T VD  K+  + PL  E   G  GVP   G TLS  +V++   W T   +L+K Y E+   G++
Sbjct:   34 RSLSTAVGAQLQALTTEYPHLDVVRYEHKNRVWSLQHVQYYSDALAIGLMENNL--------------QPGDVVLSWLPEHFSEQMVLQFACAKSGLVLYTLDPMLATTDREKAKEALAKALEITKANVLVSQEAGNDVNYISLGHSVIPELRIFDFSLGIPFITPRFPHLRFPIHTGFDQDDKEGWLPLRHMVVPSGNLETFVDPAKISKDTPLAGELLIGADGVPTGVGKTLSNEQVVKNKIWPTFAKVLAKEYHEIKGVGVV 284          
BLAST of mRNA_C-tenellus_contig10301.1.4 vs. uniprot
Match: A0A2D4BQ85_PYTIN (AMP-binding domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BQ85_PYTIN)

HSP 1 Score: 108 bits (269), Expect = 4.070e-22
Identity = 75/231 (32.47%), Postives = 112/231 (48.48%), Query Frame = 1
Query:    1 RNMSGVAGALDAVTSDIPLKEAVRYKKGNLKWTRSDVKKHTEALACGLLELGCKATFPFPPPTPELHQPGDTVAVWLPECSEKHIAQLAAARVGMVVAEVDPTLTSADAVGKVLEESGATVVLLEDKMISS-----LSEAVPELRHYSTSSGLPFRSARFPALRLCLHTGFDREPALHNFRSVLLYQPSPSPLTLVDGKVKGNLPLFTEYTAGKGGVPIKGATLSQNEVLE 678
            R  S V GALD     +P KEA R  K +L+W+  ++    + +A GL  L                QPGD +AVWLP  +E  +  LAAA+ G+ +A +DP ++SA+ V  VL +S A+ +L E K+        +SE  PEL  Y +   + FR  +F  L   + T  D E  +  FR +++  P P  +  +   V    PL   Y    G  P KG TL+  ++L+
Sbjct:   25 RAASTVGGALDEAVERLPHKEAFRSIKQDLRWSYKELDSFVQQVANGLNSLH--------------FQPGDVLAVWLPNNAENLVTHLAAAKAGLXLAVIDPEISSAEEVAFVLHDSKASGILYEPKIAGRNNSAVVSELFPELATYESRXEV-FRPKQFRNLHAVISTNTDYEQGVIPFREIMVNSPEPYTVAAMKKAVNEKTPLAVTYNRVAGQTPKKGETLTHADILK 240          
BLAST of mRNA_C-tenellus_contig10301.1.4 vs. uniprot
Match: A0A8K1FL38_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FL38_PYTOL)

HSP 1 Score: 104 bits (259), Expect = 8.170e-21
Identity = 74/231 (32.03%), Postives = 110/231 (47.62%), Query Frame = 1
Query:    1 RNMSGVAGALDAVTSDIPLKEAVRYKKGNLKWTRSDVKKHTEALACGLLELGCKATFPFPPPTPELHQPGDTVAVWLPECSEKHIAQLAAARVGMVVAEVDPTLTSADAVGKVLEESGATVVLLEDKMISSLSEAV-----PELRHYSTSSGLPFRSARFPALRLCLHTGFDREPALHNFRSVLLYQPSPSPLTLVDGKVKGNLPLFTEYTAGKGGVPIKGATLSQNEVLE 678
            R  S V GALD     +P KEA R  K +L+W+  ++  + + LA G   L                QPGD +AVWLP  +E ++  LAAA+ G+ +A +DP ++SA+ V  +LE++ A+ +L E K+      A+     PEL  Y       FR   F  L   + TG   E  +  FR + +  P    +  V   +    PL   +T G G  P KGA L+  +VL+
Sbjct:   25 RAASTVGGALDEAVERLPHKEAFRSIKQDLRWSFKELDSYVQDLANGFNSLQL--------------QPGDVLAVWLPNNAENYVTHLAAAKAGLTLAVIDPEISSAEEVKYILEDTKASGILYEPKIGERNQSAIIAGLFPELATYGQRQEA-FRPKSFRHLHTVISTG-QYEEGVIPFRQIFVNSPESHTVAAVKQAISEKTPLAVTFTKGDGKTPKKGAVLTHGDVLK 239          
BLAST of mRNA_C-tenellus_contig10301.1.4 vs. uniprot
Match: K3X788_GLOUD (AMP-binding domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X788_GLOUD)

HSP 1 Score: 95.9 bits (237), Expect = 6.190e-18
Identity = 72/231 (31.17%), Postives = 112/231 (48.48%), Query Frame = 1
Query:    1 RNMSGVAGALDAVTSDIPLKEAVRYKKGNLKWTRSDVKKHTEALACGLLELGCKATFPFPPPTPELHQPGDTVAVWLPECSEKHIAQLAAARVGMVVAEVDPTLTSADAVGKVLEESGATVVLLEDKMIS-SLSEAV----PELRHYSTSSGLPFRSARFPALRLCLHTGFDREPALHNFRSVLLYQPSPSPLTLVDGKVKGNLPLFTEYTAGKGGVPIKGATLSQNEVLE 678
            R  S V GALD     +P KEA+R  K +L+W+  ++    + +A G   L                +PG+ +AVWLP  +E  I QLAAA+ G+ +A +DP +++A+ +  +L +S A+ +L E K+   + +E V    PEL  Y  +  L FR   F  L   + TGF+    +  F  V++  P    +  V   V    PL   Y+   G  P KG  L+  +VL+
Sbjct:   25 RAASTVGGALDEAVERLPHKEALRSLKQDLRWSFKELNAIVDEVANGFHSLK--------------FEPGNVLAVWLPNNAESVITQLAAAKAGVTLAVIDPKVSTAEELEYILHDSKASGLLFEPKIAGRNQTEIVQGLFPELATYRENFRL-FRPKNFRNLHTVISTGFEPVEGIAQFHQVMVNAPEKHEVETVKQVVNEKTPLAVSYSKVNGQNPKKGEVLTHGDVLK 240          
BLAST of mRNA_C-tenellus_contig10301.1.4 vs. uniprot
Match: A0A7X0H2B5_9SPHN (Fatty-acyl-CoA synthase n=2 Tax=unclassified Sphingopyxis TaxID=2614943 RepID=A0A7X0H2B5_9SPHN)

HSP 1 Score: 87.0 bits (214), Expect = 3.700e-14
Identity = 70/243 (28.81%), Postives = 113/243 (46.50%), Query Frame = 1
Query:   16 VAGALDAVTSDIPLKEAVRYKKGNLKWTRSDVKKHTEALACGLLELGCKATFPFPPPTPELHQPGDTVAVWLPECSEKHIAQLAAARVGMVVAEVDPTLTSADAVGKVLEESGATVVLL-----EDKMISSLSEAVPELRHYSTSSGLPFRSARFPALRLCLHTGFDREPALHNFRSVLLYQPSPSPLTLVDGKVKGNLPLFTEYTAGKGGVPIKGATLSQNEVLETGKWETVGAILSKTYTE 729
            +    D   +  P  EA+  +  +++W+  ++K   +A+A GLLE G K              PGD V +W P C+E  + QLA A+ G+++  ++P    A+ +   L + G T ++L         I+ L E  PEL    TS+    R+AR P LRL +  G         F ++      P    L D ++   +P+  ++T+G  G P KGATLS   +L  G +  VGA +    T+
Sbjct:   19 IGDCFDRTVARHPDSEALVVRHQSVRWSWRELKARVDAVAAGLLERGLK--------------PGDRVGIWAPNCAEWVVVQLATAKAGLILVNINPAYRVAE-LDYALNKVGCTALILAPSHKSSDYIAMLGELAPEL---PTSTPGMLRAARLPDLRLVIALGGRDHAGCLPFDALASADTGP----LADVRLDPAMPVNIQFTSGTTGFP-KGATLSHRNILNNGAF--VGARIGLKATD 236          
BLAST of mRNA_C-tenellus_contig10301.1.4 vs. uniprot
Match: UPI001FF5FBB5 (AMP-binding protein n=1 Tax=Sphingobium sp. MAH-33 TaxID=2933566 RepID=UPI001FF5FBB5)

HSP 1 Score: 86.3 bits (212), Expect = 6.520e-14
Identity = 69/225 (30.67%), Postives = 104/225 (46.22%), Query Frame = 1
Query:   16 VAGALDAVTSDIPLKEAVRYKKGNLKWTRSDVKKHTEALACGLLELGCKATFPFPPPTPELHQPGDTVAVWLPECSEKHIAQLAAARVGMVVAEVDPTLTSAD---AVGKVLEESGATVVLLEDKMISSLSEAVPELRHYSTSSGLPFRSARFPALRLCLHTGFDREPALHNFRSV--LLYQPSPSPLTLVDGKVKGNLPLFTEYTAGKGGVPIKGATLSQNEVL 675
            +  ALD      P K+A+  + GN++++ S++K  T+  A GLL LG K              PGD V +W P C+E  IAQLA AR GM++  ++P    A+    +GKV  E  A +     K    L+     + H+    G    S   PA R  +  G +  P   +F  V  L    S + L  +   +K + P+  ++T+G  G P KG TLS   +L
Sbjct:   22 IGEALDRAAQRWPDKDALVARHGNIRYSWSELKAATDDFAAGLLALGVK--------------PGDRVGIWAPNCAEWTIAQLATARAGMILVNINPAYRVAELEYTLGKV--EVRALICAASFKNSDYLAMTESFVTHFGEQPG-EIVSVDLPAFRYAIKIGGEPRPGWLDFSEVAGLRTAASETELASIAATLKADDPINIQFTSGTTGAP-KGVTLSHRNIL 228          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10301.1.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2J8_ECTSI7.520e-9463.52AMP-binding domain-containing protein n=2 Tax=Ecto... [more]
A0A7S3XZ81_HETAK3.890e-4637.94Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2XZH5_9STRA1.280e-4138.46Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2CY20_9STRA1.100e-2832.65Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
B7G0K8_PHATC2.820e-2734.34Predicted protein n=3 Tax=Phaeodactylum tricornutu... [more]
A0A2D4BQ85_PYTIN4.070e-2232.47AMP-binding domain-containing protein n=1 Tax=Pyth... [more]
A0A8K1FL38_PYTOL8.170e-2132.03Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3X788_GLOUD6.190e-1831.17AMP-binding domain-containing protein n=1 Tax=Glob... [more]
A0A7X0H2B5_9SPHN3.700e-1428.81Fatty-acyl-CoA synthase n=2 Tax=unclassified Sphin... [more]
UPI001FF5FBB56.520e-1430.67AMP-binding protein n=1 Tax=Sphingobium sp. MAH-33... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig10301contigC-tenellus_contig10301:288..4037 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G2J8
PFAMsAMP-binding,AMP-binding_C,NAD_binding_4,PP-binding
Model size2078
Max annot lvl2759|Eukaryota
KEGG rclassRC00002,RC00004,RC00014,RC00017
KEGG koko:K00666,ko:K01897,ko:K14156
KEGG TC4.C.1.1
KEGG ReactionR01021,R01280,R01468
KEGG Pathwayko00061,ko00071,ko00564,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,ko05231,map00061,map00071,map00564,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920,map05231
KEGG ModuleM00086,M00090,M00092
Hectar predicted targeting categoryother localisation
Exons4
Evalue9.3e-101
EggNOG OGsCOG0318@1|root,KOG1177@2759|Eukaryota
Ec32 ortholog descriptionAMP-dependent synthetase/ligase
Ec32 orthologEc-11_002500.1
EC2.7.1.32,2.7.1.82,6.2.1.3
Descriptiono-succinylbenzoate-CoA ligase activity
Cds size729
COG categoryIQ
BRITEko00000,ko00001,ko00002,ko01000,ko01004,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig10301.1.4prot_C-tenellus_contig10301.1.4Choristocarpus tenellus KU2346polypeptideC-tenellus_contig10301 294..2694 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789125.2723508-UTR-C-tenellus_contig10301:287..2931680789125.2723508-UTR-C-tenellus_contig10301:287..293Choristocarpus tenellus KU2346UTRC-tenellus_contig10301 288..293 +
1680789125.352877-UTR-C-tenellus_contig10301:2694..40371680789125.352877-UTR-C-tenellus_contig10301:2694..4037Choristocarpus tenellus KU2346UTRC-tenellus_contig10301 2695..4037 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789125.3059986-CDS-C-tenellus_contig10301:293..4531680789125.3059986-CDS-C-tenellus_contig10301:293..453Choristocarpus tenellus KU2346CDSC-tenellus_contig10301 294..453 +
1680789125.3198829-CDS-C-tenellus_contig10301:770..9641680789125.3198829-CDS-C-tenellus_contig10301:770..964Choristocarpus tenellus KU2346CDSC-tenellus_contig10301 771..964 +
1680789125.3314545-CDS-C-tenellus_contig10301:1706..19281680789125.3314545-CDS-C-tenellus_contig10301:1706..1928Choristocarpus tenellus KU2346CDSC-tenellus_contig10301 1707..1928 +
1680789125.342163-CDS-C-tenellus_contig10301:2541..26941680789125.342163-CDS-C-tenellus_contig10301:2541..2694Choristocarpus tenellus KU2346CDSC-tenellus_contig10301 2542..2694 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig10301.1.4

>prot_C-tenellus_contig10301.1.4 ID=prot_C-tenellus_contig10301.1.4|Name=mRNA_C-tenellus_contig10301.1.4|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=243bp
MSGVAGALDAVTSDIPLKEAVRYKKGNLKWTRSDVKKHTEALACGLLELG
CKATFPFPPPTPELHQPGDTVAVWLPECSEKHIAQLAAARVGMVVAEVDP
TLTSADAVGKVLEESGATVVLLEDKMISSLSEAVPELRHYSTSSGLPFRS
ARFPALRLCLHTGFDREPALHNFRSVLLYQPSPSPLTLVDGKVKGNLPLF
TEYTAGKGGVPIKGATLSQNEVLETGKWETVGAILSKTYTEV*
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mRNA from alignment at C-tenellus_contig10301:288..4037+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig10301.1.4 ID=mRNA_C-tenellus_contig10301.1.4|Name=mRNA_C-tenellus_contig10301.1.4|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3750bp|location=Sequence derived from alignment at C-tenellus_contig10301:288..4037+ (Choristocarpus tenellus KU2346)
CGAAACATGTCTGGGGTTGCTGGAGCACTGGATGCTGTGACTTCCGACAT TCCCCTAAAAGAGGCAGTGCGCTACAAGAAGGGAAACCTCAAGTGGACAC GCTCTGATGTCAAGAAACACACTGAGGCTCTTGCCTGCGGTCTGCTTGAG CTGGGCTGCAAGGCGAGTGGGTGATGTGTTACGGATTAAAGTTGTGAATG GGACCTAAAGAGGGGAAGAAGGGGGGTTGAGAGGAGATACTCCAAGATGC TCTTCAAATCTATTTGGTCTATGTTTCGCTGACATTTTTGCAGTGAGACA GGAATCAAGAATTGCTGATACAGCAGTTTCATTTCTAGTTGCGAATTTGT GCAGATATGTGATCAATTAATGCGCCGCCTTCCTTCAATTATTTTACGCC CTATTCTTTCCAGCCTCCACATCCTACCCTGAGAATCCTAGGTCACTTGA CTTGGTAATCAATTTCCTACCAACCCTGAACAGCCTTCCCCTTCCCCCCC CCTACCCCTGAACTGCACCAGCCTGGTGATACTGTGGCAGTGTGGCTCCC AGAGTGCTCAGAGAAGCACATTGCACAGCTAGCTGCAGCAAGGGTTGGCA TGGTGGTAGCTGAGGTCGACCCAACACTGACCTCTGCAGATGCTGTTGGG AAGGTTCTTGAAGAGTCGGGTGCTACAGTAAGTGGAACAAGGACAGCTGG CAGAAGATGTCAAGCTCTGGGGGGGAGGGGTTACCATGTCATATTGGCCG ATGGCTCGGTGATGTTCATTGTGGTTGGCAACAACTGTATGCCCTCGGCA TGACGCGAGATTCTTGTGACCCAATTTGGATGAGGGCATTCACAGTGTTG CTGTTGTGTGTAACTATCACTTTGATTGGACACTGTTCAATGATAAATGT ACTGTGACATTGGTAGAAGTGTGTGACTAGTTGCGTTGTGGCTTGAAAAG AGTCGTGCTACATGCCTACGTCATTTGGGATATCTCCTTTGGTGGCCTAC ACAAGTTGCCATTTTGTATTTTGTTTGGTGGGGGCTAATATATTGGTTTG TGGTTATGTTACGATAGCAAGAAGCTGTCAACAGCATTTTAGGTCACAAA TCGTACCTGGAGAACCACTTTTCTTGCTGGCAGAGATATGGGATTTGTTG AAATATTTGTCAACCGACCAAAAATATTCACATTGGGGTTTTTATTGCCA ACAAGAGAACACAGCAGTTGCAAGGTCTGTCTGAGCGGTGTGTGATGCCA TCTCTACTCACTTTGCTGTTAGAGCTTGCTTTACTTGAGAGGCTCAGCCC TGACACGAGCAGGAAAATTCATCCATCCTCAGTCTCTCCATTGCACTTAC CATCTCCATGCTCAGCACCCAAACAACTGCCCCAAAAATTTCCTTCCCAT CTTTTTCTTTATTGTGCAGGTTGTCCTGCTAGAAGACAAGATGATATCAT CCCTCTCTGAGGCTGTTCCTGAACTTCGTCATTACAGCACCTCCTCCGGT CTTCCCTTTCGCTCAGCACGATTCCCAGCTCTACGTCTGTGCCTCCACAC AGGTTTTGACCGTGAGCCTGCCCTGCATAACTTCCGGAGTGTTCTCCTGT ACCAGCCCTCTCCATCACCACTGACACTTGTTGACGGCAAGGTGATTTTC TTACTTGCAGAATGCTTGTTGTAGCTATCCCTCAATCATCGATAGTCCTT CTATGGGTGGATTTTGATCCTGCCTTGGGTGTTTTGGAGAGGTTGAAGGG CGTGTGTTTGTGTTGCGTGGTAGTGAAAAAGACGTATTTTTTTCCAGGGG TTAGGGATGGATATTGAACGCGCTTTTTTTTATTGGTTGTTGTTACGGCA GGAGAGTTGAAAAGGTTTTCATTTGTACATTTTTTTTAAGTCGAAGGTGC ATATCACCGTTATAGAACCAGGAATGGTGAAAGGAAAATTGGGGTGAAAA CAGATGCTCGTTTGTACTACATTTTGAAGGTGGGGTTAATGTGTTTCATC ACAATCAAAAGGCCTGTTATCCAGGGTGTGTTGATGCCACAAATCAACCT ACTCTAACAAAAGCTGGTGCAATAATCACTTTCCCTTCCTTCTCCCTACA TATAGTTGCCTTGCCGTCTCATTCAACACTCTATCTCATCGCACAACATA ACAACCCAAGACAAAGGCAGTCTAGTGTTAGCGCTCATGATGCTGTTCCT GTTCCTGTCACACCCCTCTAACCTCCCCCATTCATCACTGCTGCTCCCTC GCAGGTGAAGGGAAATTTGCCGTTGTTCACAGAGTACACGGCTGGGAAGG GAGGAGTCCCCATAAAGGGGGCCACCCTCTCACAGAATGAGGTGTTGGAG ACGGGCAAGTGGGAGACGGTTGGTGCCATCTTGTCCAAGACGTACACTGA AGTCTAACAAACTGGCATTATTTAGGTAGATGTTTTGGTGGTGTTGATGA GACATCAAGAGAGGCAGTGGTACCTGTTGTAGGAGTGTCGAAGCACTCCT GCTGATAACAGCTGATGAGTAGTGCTGATAAGCTTTTTCTTTCCATAGGC TAGCTCAAAAGGCTTGTCTTCTTTGTCACTGTACTACCTGGTCTGCGGAG GTAGGGGTTGGTGATATTGGTGCATCACATTGTAGTCTCACCCGTCACTT CCGGATGTCCTTGCAGCCCTTCGATTTCCACATCTTGATGACCTGCTTTC CAACTTTCCAGGCCTGGCATGACCAGTGTTCTCTTGCAGAGTATTGGGGA GTTTGCCCTGATGGTAGTGAGGATGGGATGTGTAGGGGAAGGGGTAGGCA GGGGAGGAGGACATGGGTGAGAGTGGAAGCTCAAGGCAACAAGAGTAGGT CGGGTTGAAAGCTGGGGGAGGAGGAGCGTTTGCAGTAGGAACCAGGCTGA TTTCAGTTTGGGATGGAGAGGGATGGTAGGTGTCTTAAAAGACCTCCATG CTGGGACACAAAGCCTTGAGGTGTTTGTGAAAGGGGGGAGCTTTCACTTT CCCAGGATTTGCTCCGCTTGCCAGTAGTGTTGACCACTGCTTTGTGGGTG GTATTAGTTTCAAGGTTGAGAGGTCATGTCCTGTGATGCACTATTGTAGC TGGATATTTTATTGAGCTCGGGAAAACTACTGTTGATCTATGATTTTTTG ACCCATGGTTCACAAGGTGGCTGGTTGTTTTTGGTTTATTTCTTTTGTTT TATGCAGTCAGTTACTGTGTTGTCTCTCAGATTGCAATGGACGGCTGGTT TGGCTTGTTGGAGGTTGGGCATGGTCAACCAGGGGATAAAGTAGTAAGTT CAAAGAAGTGATGAGTCACCGTTTGGAGGACCAAATTGAAATATAAACTT CAAGGACATTGAAACATGCACAATATTGGTACATAGACTGCAATTTGGCA CAGATGTTACACAGTACCTCAAGTATGTGCAGATATCCAGAGGTCTGTAG TTGAGACCATTCCATTTAGCATTAGCAGCATTTGTACAGGAGGAAGCGGT CACCACTGGTAACAGCACTCATAGGTGATCTGGTAACAGCAAGTCGGTTC TCACTGGTGATACCCAAGGTCGTCAGGAGAGTGATTGTTTCCTTCTCACC TCCAGATCCCAACCTGTTGACCAATATACACAACTGAGCCGTGTTTGGAG GAAGCATCAGTATTCAATTGTGTCACCTTTGATTCACACTATTTCTGAAT CTTCGCCACTGGGCATGGATGGGATTCAGGGTGAATACTGCAGGGGTCCC
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Coding sequence (CDS) from alignment at C-tenellus_contig10301:288..4037+

>mRNA_C-tenellus_contig10301.1.4 ID=mRNA_C-tenellus_contig10301.1.4|Name=mRNA_C-tenellus_contig10301.1.4|organism=Choristocarpus tenellus KU2346|type=CDS|length=729bp|location=Sequence derived from alignment at C-tenellus_contig10301:288..4037+ (Choristocarpus tenellus KU2346)
ATGTCTGGGGTTGCTGGAGCACTGGATGCTGTGACTTCCGACATTCCCCT
AAAAGAGGCAGTGCGCTACAAGAAGGGAAACCTCAAGTGGACACGCTCTG
ATGTCAAGAAACACACTGAGGCTCTTGCCTGCGGTCTGCTTGAGCTGGGC
TGCAAGGCGACCTTCCCCTTCCCCCCCCCTACCCCTGAACTGCACCAGCC
TGGTGATACTGTGGCAGTGTGGCTCCCAGAGTGCTCAGAGAAGCACATTG
CACAGCTAGCTGCAGCAAGGGTTGGCATGGTGGTAGCTGAGGTCGACCCA
ACACTGACCTCTGCAGATGCTGTTGGGAAGGTTCTTGAAGAGTCGGGTGC
TACAGTTGTCCTGCTAGAAGACAAGATGATATCATCCCTCTCTGAGGCTG
TTCCTGAACTTCGTCATTACAGCACCTCCTCCGGTCTTCCCTTTCGCTCA
GCACGATTCCCAGCTCTACGTCTGTGCCTCCACACAGGTTTTGACCGTGA
GCCTGCCCTGCATAACTTCCGGAGTGTTCTCCTGTACCAGCCCTCTCCAT
CACCACTGACACTTGTTGACGGCAAGGTGAAGGGAAATTTGCCGTTGTTC
ACAGAGTACACGGCTGGGAAGGGAGGAGTCCCCATAAAGGGGGCCACCCT
CTCACAGAATGAGGTGTTGGAGACGGGCAAGTGGGAGACGGTTGGTGCCA
TCTTGTCCAAGACGTACACTGAAGTCTAA
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