mRNA_C-tenellus_contig103.12.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig103.12.1
Unique NamemRNA_C-tenellus_contig103.12.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig103.12.1 vs. uniprot
Match: A0A179EVJ5_METCM (Reverse transcriptase (RNA-dependent DNA polymerase) domain-containing protein n=1 Tax=Pochonia chlamydosporia 170 TaxID=1380566 RepID=A0A179EVJ5_METCM)

HSP 1 Score: 96.7 bits (239), Expect = 8.530e-19
Identity = 55/177 (31.07%), Postives = 97/177 (54.80%), Query Frame = 2
Query:  323 FQPDLTSFSEDIDDIFAIYEGPIEQAKDAFKDLHADHGLKTTAVLSPILVHFLDIVIHKGKRLIGSNRLDIKTHQKVLDKYMYIPFRSSHPMHSKRGYITGELLRYVSTCSDKESYPEVRNKFYFKLRARGYPPWFLLLQCFEKVNYSQRAERLKPTIPRQDITPATFVLSYHPMWD 853
            +QP +  ++  IDDI  I+EG  ++       +     L     +S +   FLDI I K +   G  +L  +  +K +++++YIP+ S+HP+H K+ ++  EL+R+    S+ E + + R++FY  LR RGYP   +L   F++V+Y QRA  L P   ++ + P      Y+P+W+
Sbjct:  367 YQPGVRLYNRYIDDILVIFEGTRKELMHFLNQVKLG-PLTINWDVSLLKKEFLDIEILKSRDQSGP-KLVTRLFKKQMNRHLYIPWSSAHPLHVKKAFVKAELIRFAIISSEVEYFADARSQFYGNLRRRGYPSQ-VLENWFKQVSYEQRAIFLSPKEDKEMVAPLMLSGRYNPVWE 540          
BLAST of mRNA_C-tenellus_contig103.12.1 vs. uniprot
Match: A0A545UKC7_9HYPO (Reverse transcriptase (RNA-dependent DNA polymerase) domain-containing protein n=1 Tax=Cordyceps javanica TaxID=43265 RepID=A0A545UKC7_9HYPO)

HSP 1 Score: 94.4 bits (233), Expect = 6.340e-18
Identity = 53/171 (30.99%), Postives = 93/171 (54.39%), Query Frame = 2
Query:  356 IDDIFAIYEGPIEQAKDAFKDLHADHGLKTTAVLSPILVHFLDIVIHKGKRLIGSNRLDIKTHQKVLDKYMYIPFRSSHPMHSKRGYITGELLRYVSTCSDKESYPEVRNKFYFKLRARGYPPWFLLLQCFEKVNYSQRAERLKPTIPRQDITPATFVLSYHPMWDIPSIK 868
            IDDI  +++G  E+ ++ F   +    L  T  ++ +   FLDI + +   L     +  +  +K +++++YIP+ S+HP+H K+G++  EL RY+  CS  E + + R + Y  LR RGYP   +L + F +V+Y  RA+ L P   ++D  P      Y+P+WD   + 
Sbjct:  744 IDDILCLFQGTKEEVQN-FVSGYTIGPLSLTWSINRLRNEFLDIELIQEPGL-TQRVVHTRLFRKTMNRHLYIPWSSAHPLHVKKGFVKAELTRYIILCSKFEHFADARKELYGNLRRRGYPVR-VLDEWFIQVSYETRAQILLPKEKKEDRAPLMLSGHYNPVWDFVDVN 911          
BLAST of mRNA_C-tenellus_contig103.12.1 vs. uniprot
Match: UPI001150056C (hypothetical protein n=1 Tax=Pyricularia pennisetigena TaxID=1578925 RepID=UPI001150056C)

HSP 1 Score: 94.0 bits (232), Expect = 7.900e-18
Identity = 60/174 (34.48%), Postives = 88/174 (50.57%), Query Frame = 2
Query:  356 IDDIFAIYEGPIEQAKDAFKDLHADHGLKTTAVLSPILVHFLDIVIHKGKRLIGSNRLDI---KTHQKVLDKYMYIPFRSSHPMHSKRGYITGELLRYVSTCSDKESYPEVRNKFYFKLRARGYPPWFLLLQCFEKVNYSQRAERLKPTIPRQDITPATFVLSYHPMWDIPSIK 868
            IDDI  I +G  E+  D F D      L      SP+   FLDI +    R+   N L +   +  +K +++++YIP+ S+HP+H K+G++  EL R+   CS  E + E R +FY  LR RGYP    L Q F ++ Y  RA  L P     +  P      Y+P+WD   +K
Sbjct:  533 IDDILCILQGTKEEQSD-FVDRFRLGNLTVRWDSSPVRNEFLDIEL---LRIPHENHLRVCHTRLFRKPMNRFLYIPWSSAHPLHVKKGFVKAELTRFAILCSRYEFFAEARMEFYGNLRRRGYPVE-TLRQWFLQIQYDDRARILLPKQKIDNGAPLMLSGHYNPVWDYVDVK 701          
BLAST of mRNA_C-tenellus_contig103.12.1 vs. uniprot
Match: A0A4P7NSI7_MAGOR (Uncharacterized protein n=2 Tax=Pyricularia TaxID=48558 RepID=A0A4P7NSI7_MAGOR)

HSP 1 Score: 89.4 bits (220), Expect = 1.630e-16
Identity = 62/199 (31.16%), Postives = 96/199 (48.24%), Query Frame = 2
Query:  305 NLKNSFFQPDLTSFSED--------IDDIFAIYEGPIEQAKDAFKDLHADHGLKTTAVLSPILVHFLDIVIHKGKRLIGSNRLDI---KTHQKVLDKYMYIPFRSSHPMHSKRGYITGELLRYVSTCSDKESYPEVRNKFYFKLRARGYPPWFLLLQCFEKVNYSQRAERLKPTIPRQDITPATFVLSYHPMWDIPSIK 868
            N+  ++F+      S+D        IDDI  I +G  E+  D F +      L      S +   FLDI +    R+   N L +   +  +K +++++YIP+ S+HP+H K+G++  EL R+   CS  E + E R +FY  LR RGYP    L Q F ++ Y  RA  L P     +  P      Y+P+WD   +K
Sbjct:  175 NIYAAYFERKARIVSQDGVLLYIRYIDDILCILQGTKEEQSD-FVNRFRLGNLTVRWDSSSVRNEFLDIEL---LRIPHENHLRVCHTRLFRKPMNRFLYIPWSSAHPLHVKKGFVKAELTRFAILCSRYEFFAEARMEFYGNLRRRGYPVE-TLRQWFLQIQYDDRARILLPKQKIDNGAPLMLSGHYNPVWDYVDVK 368          
BLAST of mRNA_C-tenellus_contig103.12.1 vs. uniprot
Match: A0A1Y2EY93_9BASI (Uncharacterized protein (Fragment) n=1 Tax=Leucosporidium creatinivorum TaxID=106004 RepID=A0A1Y2EY93_9BASI)

HSP 1 Score: 74.3 bits (181), Expect = 1.370e-12
Identity = 41/108 (37.96%), Postives = 60/108 (55.56%), Query Frame = 2
Query:  536 KTHQKVLDKYMYIPFRSSHPMHSKRGYITGELLRYVSTCSDKESYPEVRNKFYFKLRARGYPPWFLLLQCFEKVNYSQRAERLKPTIPRQ--DITPATFVLSYHPMWD 853
            + +QK ++ Y YIP+ S HP+  K  ++ G LL YV + S  + +   R KFY++LRARGYPP +L  Q F    +  RA  L   I     D  P  + + Y+P+WD
Sbjct:    2 EVYQKPMNSYQYIPWLSFHPVWVKASFVHGVLLAYVRSSSRYDDFLGSRLKFYYRLRARGYPPRWLNKQFFLVDWHRDRASTLVDRIKAAPLDRGPLIYKVEYNPVWD 109          
BLAST of mRNA_C-tenellus_contig103.12.1 vs. uniprot
Match: UPI001EE73D78 (uncharacterized protein LOC124295707 n=2 Tax=Neodiprion TaxID=270857 RepID=UPI001EE73D78)

HSP 1 Score: 55.8 bits (133), Expect = 3.590e-5
Identity = 35/95 (36.84%), Postives = 53/95 (55.79%), Query Frame = 1
Query:   19 VKLEMVRRSHILITADVVGLYPSLINHNVFYRVISATR-RHFRKLWSLPMFFLFYHILRFVVNNSFVNFNGEMFKQIKGLAMGSPAAPDMAIIAL 300
            +KL+ V   H+LI+ DVV L+ ++  HN   R I   R    +K   L    L   ++ F  N+ +  F+G  + Q +G AMGSPA+P +AIIA+
Sbjct:  113 IKLKKVNEDHVLISLDVVSLFTNV--HNSLIRKIIIERWDEIQKFVQLDQTTLL-ELIDFCYNSGYFVFDGNFYLQKEGCAMGSPASPSIAIIAV 204          
BLAST of mRNA_C-tenellus_contig103.12.1 vs. uniprot
Match: A0A8J9WSQ3_9CHLO (Uncharacterized protein n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WSQ3_9CHLO)

HSP 1 Score: 55.1 bits (131), Expect = 6.080e-5
Identity = 36/110 (32.73%), Postives = 58/110 (52.73%), Query Frame = 1
Query:   49 ILITADVVGLYPSLINHNVFYRVISATRRHFRKLWSLPMFFLFYHILRFVVNNSFVNFNGEMFKQIKGLAMGSPAAPDMAIIALVESEKLFLSTRPNIFFRRHRRYLRDL 378
            +L TADV  LY S+   +    +    R             L    ++FV+ N+++ F+G+ +KQIKGLAMG+P AP +A I +   EK   ++RP +    + R+L D+
Sbjct:  132 LLSTADVESLYTSIPVGDAVEALAQTLREKRVGEKEAACIKL---AVKFVLMNNYLTFDGKCYKQIKGLAMGTPLAPPLANIFMAHLEKKTFASRPGLCPVMYGRFLDDI 238          
BLAST of mRNA_C-tenellus_contig103.12.1 vs. uniprot
Match: UPI001EE6B5B5 (uncharacterized protein LOC124309688 n=2 Tax=Neodiprion TaxID=270857 RepID=UPI001EE6B5B5)

HSP 1 Score: 55.1 bits (131), Expect = 6.300e-5
Identity = 34/100 (34.00%), Postives = 54/100 (54.00%), Query Frame = 1
Query:    4 TPSQHVKLEMVRRSHILITADVVGLYPSLINHNVFYRVISATR-RHFRKLWSLPMFFLFYHILRFVVNNSFVNFNGEMFKQIKGLAMGSPAAPDMAIIAL 300
            T    +KL+ +   H+LI+ DVV L+ ++  HN   R I   R    +K   L    L   ++ F  ++ +  F+G  + Q +G AMGSPA+P +AIIA+
Sbjct:   35 TKEDQIKLKKINEDHVLISLDVVSLFTNV--HNSLIRKIIIERWDEIQKFVQLDQTTLL-ELIDFCYDSGYFVFDGNFYLQKEGCAMGSPASPSIAIIAV 131          
BLAST of mRNA_C-tenellus_contig103.12.1 vs. uniprot
Match: A0A8J9RII3_9CHLO (Uncharacterized protein n=2 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RII3_9CHLO)

HSP 1 Score: 55.1 bits (131), Expect = 6.980e-5
Identity = 36/110 (32.73%), Postives = 58/110 (52.73%), Query Frame = 1
Query:   49 ILITADVVGLYPSLINHNVFYRVISATRRHFRKLWSLPMFFLFYHILRFVVNNSFVNFNGEMFKQIKGLAMGSPAAPDMAIIALVESEKLFLSTRPNIFFRRHRRYLRDL 378
            +L TADV  LY S+   +    +    R             L    ++FV+ N+++ F+G+ +KQIKGLAMG+P AP +A I +   EK   ++RP +    + R+L D+
Sbjct:  268 LLSTADVESLYTSIPVGDAVEALAQTLREKRVGEKEAACIKL---AVKFVLMNNYLTFDGKCYKQIKGLAMGTPLAPPLANIFMAHLEKKTFASRPGLCPVMYGRFLDDI 374          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig103.12.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A179EVJ5_METCM8.530e-1931.07Reverse transcriptase (RNA-dependent DNA polymeras... [more]
A0A545UKC7_9HYPO6.340e-1830.99Reverse transcriptase (RNA-dependent DNA polymeras... [more]
UPI001150056C7.900e-1834.48hypothetical protein n=1 Tax=Pyricularia penniseti... [more]
A0A4P7NSI7_MAGOR1.630e-1631.16Uncharacterized protein n=2 Tax=Pyricularia TaxID=... [more]
A0A1Y2EY93_9BASI1.370e-1237.96Uncharacterized protein (Fragment) n=1 Tax=Leucosp... [more]
UPI001EE73D783.590e-536.84uncharacterized protein LOC124295707 n=2 Tax=Neodi... [more]
A0A8J9WSQ3_9CHLO6.080e-532.73Uncharacterized protein n=1 Tax=Coccomyxa sp. Obi ... [more]
UPI001EE6B5B56.300e-534.00uncharacterized protein LOC124309688 n=2 Tax=Neodi... [more]
A0A8J9RII3_9CHLO6.980e-532.73Uncharacterized protein n=2 Tax=Coccomyxa sp. Obi ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig103contigC-tenellus_contig103:27494..28361 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog5286.M7WJ66
Model size868
Max annot lvl4751|Fungi
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.45e-09
EggNOG OGs2CVN4@1|root,2RSCH@2759|Eukaryota,38Y7D@33154|Opisthokonta,3P7RD@4751|Fungi,3V71K@5204|Basidiomycota
Cds size303
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789125.018131-UTR-C-tenellus_contig103:27493..280581680789125.018131-UTR-C-tenellus_contig103:27493..28058Choristocarpus tenellus KU2346UTRC-tenellus_contig103 27494..28058 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789125.0295382-CDS-C-tenellus_contig103:28058..283611680789125.0295382-CDS-C-tenellus_contig103:28058..28361Choristocarpus tenellus KU2346CDSC-tenellus_contig103 28059..28361 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig103.12.1prot_C-tenellus_contig103.12.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig103 28059..28361 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig103.12.1

>prot_C-tenellus_contig103.12.1 ID=prot_C-tenellus_contig103.12.1|Name=mRNA_C-tenellus_contig103.12.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=101bp
MYIPFRSSHPMHSKRGYITGELLRYVSTCSDKESYPEVRNKFYFKLRARG
YPPWFLLLQCFEKVNYSQRAERLKPTIPRQDITPATFVLSYHPMWDIPSI
K
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mRNA from alignment at C-tenellus_contig103:27494..28361+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig103.12.1 ID=mRNA_C-tenellus_contig103.12.1|Name=mRNA_C-tenellus_contig103.12.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=868bp|location=Sequence derived from alignment at C-tenellus_contig103:27494..28361+ (Choristocarpus tenellus KU2346)
CCTACACCCAGCCAACATGTCAAACTTGAGATGGTGCGCCGCTCACATAT CCTCATCACAGCTGATGTTGTTGGTCTTTATCCCTCTCTCATAAATCACA ATGTGTTTTATAGAGTAATATCTGCCACTCGCAGACACTTCCGCAAACTC TGGTCCCTTCCAATGTTCTTCCTTTTCTACCACATCCTACGCTTTGTTGT CAACAACAGCTTTGTGAACTTTAACGGCGAGATGTTCAAACAAATAAAAG GATTAGCAATGGGCAGCCCAGCTGCCCCTGACATGGCAATCATTGCCCTG GTGGAATCTGAAAAACTCTTTCTTTCAACCAGACCTAACATCTTTTTCCG AAGACATAGACGATATCTTCGCGATTTACGAGGGACCCATTGAGCAAGCC AAGGATGCTTTCAAAGATCTACATGCTGACCATGGTCTCAAAACCACAGC AGTACTCTCTCCCATATTGGTTCACTTTCTAGACATTGTCATCCACAAAG GGAAGCGATTGATAGGCTCTAACCGTCTAGATATTAAAACTCATCAAAAA GTACTTGACAAGTACATGTACATACCTTTCAGGTCAAGCCACCCTATGCA TTCGAAACGAGGTTATATCACTGGTGAGCTCCTTAGATATGTATCAACCT GCTCTGATAAGGAATCCTACCCCGAAGTAAGAAACAAATTCTACTTCAAA CTCAGAGCCAGAGGCTACCCACCTTGGTTCCTACTACTGCAGTGTTTCGA AAAAGTCAACTACTCCCAAAGAGCAGAAAGACTCAAACCAACAATACCCA GACAGGACATTACCCCTGCAACCTTCGTGCTCTCGTACCACCCAATGTGG GATATCCCCTCCATCAAA
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Coding sequence (CDS) from alignment at C-tenellus_contig103:27494..28361+

>mRNA_C-tenellus_contig103.12.1 ID=mRNA_C-tenellus_contig103.12.1|Name=mRNA_C-tenellus_contig103.12.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=303bp|location=Sequence derived from alignment at C-tenellus_contig103:27494..28361+ (Choristocarpus tenellus KU2346)
ATGTACATACCTTTCAGGTCAAGCCACCCTATGCATTCGAAACGAGGTTA
TATCACTGGTGAGCTCCTTAGATATGTATCAACCTGCTCTGATAAGGAAT
CCTACCCCGAAGTAAGAAACAAATTCTACTTCAAACTCAGAGCCAGAGGC
TACCCACCTTGGTTCCTACTACTGCAGTGTTTCGAAAAAGTCAACTACTC
CCAAAGAGCAGAAAGACTCAAACCAACAATACCCAGACAGGACATTACCC
CTGCAACCTTCGTGCTCTCGTACCACCCAATGTGGGATATCCCCTCCATC
AAA
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