mRNA_C-tenellus_contig10252.2.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10252.2.1 vs. uniprot
Match: D7FZW6_ECTSI (Complex I intermediate-associated protein 30, mitochondrial (NADH dehydrogenase [ubiquinon) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW6_ECTSI) HSP 1 Score: 147 bits (372), Expect = 2.420e-41 Identity = 75/129 (58.14%), Postives = 94/129 (72.87%), Query Frame = 1 Query: 1 AQAKFAGFCGSRPPRRLNPLDL-DLFQGFQMRIRGDGRKYEVNVESQTTIPNDVYQGYLHLPQGEWTTVALPFERLLLTGRGQVRFHQRIMDWA-KLHSIGFSLADGIEGPFQLDVAWIAAVQEVHTLG 381 A+AK GFCG+R RR PL L D ++G +MRIR DGR+YEVN E Q+ I ND+YQGY+ P G+W TV+LP RLLLTG+GQ+R QR D +L SIGF++ADG+ GPF+LDVAW+A V EV G Sbjct: 143 ARAKVGGFCGTRSTRRQEPLVLPDGYRGVEMRIRTDGRQYEVNFEPQSGIINDLYQGYVRTPAGQWATVSLPLNRLLLTGQGQIRDIQRKWDVGMELKSIGFTIADGVGGPFRLDVAWVALVSEVDDEG 271
BLAST of mRNA_C-tenellus_contig10252.2.1 vs. uniprot
Match: A0A6H5KSW2_9PHAE (CIA30 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSW2_9PHAE) HSP 1 Score: 109 bits (272), Expect = 4.740e-28 Identity = 52/87 (59.77%), Postives = 67/87 (77.01%), Query Frame = 1 Query: 112 KYEVNVESQTTIPNDVYQGYLHLPQGEWTTVALPFERLLLTGRGQVRFHQRIMDWA-KLHSIGFSLADGIEGPFQLDVAWIAAVQEV 369 +YEVN E Q+ I ND+YQGY+ P G+W TV+LP RLLLTG+GQ+R QR D +L+SIGF++ADG+ GPF+LDVAW+A V EV Sbjct: 29 RYEVNFEPQSGIINDLYQGYVRTPAGQWATVSLPLNRLLLTGQGQIRDIQRKWDMGMELNSIGFTIADGVGGPFRLDVAWVALVSEV 115
BLAST of mRNA_C-tenellus_contig10252.2.1 vs. uniprot
Match: A0A067CNK6_SAPPC (CIA30 domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CNK6_SAPPC) HSP 1 Score: 93.6 bits (231), Expect = 1.240e-20 Identity = 49/127 (38.58%), Postives = 73/127 (57.48%), Query Frame = 1 Query: 16 AGFCGSRP--PRRLNPLDLDLFQGFQMRIRGDGRKYEVNVESQTTIPNDVYQGYLHLPQGEWTTVALPFERLLLTGRGQVRFHQRI-MDWAKLHSIGFSLADGIEGPFQLDVAWIAAVQEVHTLGLA 387 +G+C R PR L+ L ++G MRI+ DGR Y +N ++ P+D+Y G+L P +W L F +LT RG V+ +D + L +IG +LAD EGPFQ+ + WI AV++V T +A Sbjct: 104 SGYCAIRGNVPRGLH---LHGYEGLAMRIKTDGRTYRINAQADGWNPHDLYMGFLKAPANKWVEAELAFSDFILTSRGYVQVDDPAKLDPSSLRTIGIALADDKEGPFQISIEWIKAVEKVDTTNIA 227
BLAST of mRNA_C-tenellus_contig10252.2.1 vs. uniprot
Match: A0A1V9YAQ8_9STRA (CIA30 domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YAQ8_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 2.530e-20 Identity = 49/125 (39.20%), Postives = 70/125 (56.00%), Query Frame = 1 Query: 16 AGFCGSRPPRRLNPLDLDLFQGFQMRIRGDGRKYEVNVESQTTIPNDVYQGYLHLPQGEWTTVALPFERLLLTGRGQVRFHQRI-MDWAKLHSIGFSLADGIEGPFQLDVAWIAAVQEVHTLGLA 387 +G+C R + L L +QG MRI+ DGR Y +N ++ P+D+Y G+L P EW L F +LT RG V+ + ++ A L +IG +LAD EGPF+L + WI AV +V T A Sbjct: 105 SGYCAIRG-NVPSGLHLHGYQGLAMRIKSDGRVYRINAQADGWNPHDLYMGFLKAPANEWVEAELAFSDFILTSRGYVQVDDPVKLNPASLRTIGIALADDKEGPFELCIEWIKAVDKVDTTNTA 228
BLAST of mRNA_C-tenellus_contig10252.2.1 vs. uniprot
Match: A7S7X8_NEMVE (Predicted protein n=2 Tax=Nematostella vectensis TaxID=45351 RepID=A7S7X8_NEMVE) HSP 1 Score: 90.5 bits (223), Expect = 4.460e-20 Identity = 44/131 (33.59%), Postives = 76/131 (58.02%), Query Frame = 1 Query: 1 AQAKFAGFCGSRPPRRLN------PLDLDLFQGFQMRIRGDGRKYEVNVESQTTIPNDVYQGYLHLPQGE-WTTVALPFERLLLTGRGQVRFHQRIMDWAKLHSIGFSLADGIEGPFQLDVAWIAAVQEVH 372 ++AK G C R +++ P D + G QMRIRGDGR Y +N++ + +D++Q +++ G W T+ +PF + +LT G ++ HQ MD ++ + G +LAD +GPF L++ +I AV ++ Sbjct: 52 SEAKHTGVCAVRSQPQVDWKGRVVPYDTSEYDGIQMRIRGDGRTYALNIQPDSVRSDDLHQAFMYTRGGPYWETIRMPFSKFILTNSGYLQDHQ--MDIPRMRTFGITLADNNDGPFSLEIDYIKAVLYIY 180
BLAST of mRNA_C-tenellus_contig10252.2.1 vs. uniprot
Match: A0A8H7BNK6_9FUNG (CIA30 domain-containing protein n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7BNK6_9FUNG) HSP 1 Score: 89.4 bits (220), Expect = 2.270e-19 Identity = 47/108 (43.52%), Postives = 64/108 (59.26%), Query Frame = 1 Query: 61 DLDLFQGFQMRIRGDGRKYEVNVESQTTIPNDVYQGYLHLPQ-GEWTTVALPFERLLLTGRGQVRFHQRIMDWAKLHSIGFSLADGIEGPFQLDVAWIAAVQEVHTLG 381 D LF+ +R+RGD RKY VN+++ I DVYQ L L + G W TV +PF +LT G ++ Q M K+ ++GFSL D EGPF+L+V WI A+ T G Sbjct: 110 DTSLFRYLAIRVRGDHRKYFVNIQTDGVIATDVYQHRLFLRRPGNWETVMIPFRDFILTNNGMIQEQQIEMFREKVKTVGFSLQDRQEGPFRLEVDWIKAMNTEFTEG 217
BLAST of mRNA_C-tenellus_contig10252.2.1 vs. uniprot
Match: A0A6P8IGB0_ACTTE (complex I intermediate-associated protein 30, mitochondrial-like isoform X2 n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8IGB0_ACTTE) HSP 1 Score: 89.4 bits (220), Expect = 2.560e-19 Identity = 44/127 (34.65%), Postives = 72/127 (56.69%), Query Frame = 1 Query: 1 AQAKFAGFCGSRPPRRLN------PLDLDLFQGFQMRIRGDGRKYEVNVESQTTIPNDVYQGYLHLPQGE-WTTVALPFERLLLTGRGQVRFHQRIMDWAKLHSIGFSLADGIEGPFQLDVAWIAAV 360 ++AK +G C R R++ P D F G QM+ +GDGR Y +N++ + +D++Q +L+ G W T +PF + +LT G ++ HQ MD+ K+ + G +LAD GPF L++ +I V Sbjct: 86 SEAKHSGICAIRSQPRVDWKGSVVPFDTSEFDGIQMKFKGDGRTYALNIQPDSVRSDDLHQSFLYTRGGPYWETARIPFSKFILTNSGYLQDHQ--MDFPKMRTFGITLADHNNGPFSLEIEYIKMV 210
BLAST of mRNA_C-tenellus_contig10252.2.1 vs. uniprot
Match: UPI00077A6786 (complex I intermediate-associated protein 30, mitochondrial-like n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A6786) HSP 1 Score: 87.0 bits (214), Expect = 2.200e-18 Identity = 43/124 (34.68%), Postives = 72/124 (58.06%), Query Frame = 1 Query: 10 KFAGFCGSRPPRRLNPL------DLDLFQGFQMRIRGDGRKYEVNVESQTTIPNDVYQGYLHLPQGE-WTTVALPFERLLLTGRGQVRFHQRIMDWAKLHSIGFSLADGIEGPFQLDVAWIAAV 360 K+ G C R + + + D+ F G QMR+RGDGR Y N+++ + +D++Q ++H G W V +PF + +LT G ++ HQ MD+ ++ ++GF+LAD GPF L++ +I V Sbjct: 95 KYTGMCSIRAQPKWDWMGDVVTNDISDFDGIQMRLRGDGRTYAFNIQTHSIREDDIHQTFIHTRGGPLWEIVRIPFTKFVLTNAGYLQDHQ--MDFPRIRTVGFTLADHNTGPFHLEIDYIKMV 216
BLAST of mRNA_C-tenellus_contig10252.2.1 vs. uniprot
Match: A0A0L0DSY5_THETB (NADH dehydrogenase 1 alpha subcomplex n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DSY5_THETB) HSP 1 Score: 86.7 bits (213), Expect = 2.810e-18 Identity = 41/120 (34.17%), Postives = 71/120 (59.17%), Query Frame = 1 Query: 16 AGFCGSRPPRRLNPLDLDLFQGFQMRIRGDGRKYEVNVESQTTIPNDVYQGYLHLPQG----EWTTVALPFERLLLTGRGQVRFHQRIMDWAKLHSIGFSLADGIEGPFQLDVAWIAAVQ 363 +GF R L+ + F++ RGDGR Y+ NV ++ +P+D++Q L + +W V +PF+ L++T RG V+ Q +D ++ S+GF+LADG++GPF+L + I A++ Sbjct: 90 SGFASFRTVPGTTVPSLEYYDAFEIVCRGDGRPYQFNVGCESVVPDDLHQAALPTHEASAAADWAVVRIPFDALIMTWRGFVQVEQLKLDSRRITSLGFTLADGVDGPFELAIRDIRAIR 209
BLAST of mRNA_C-tenellus_contig10252.2.1 vs. uniprot
Match: A0A8H7PJD9_MORIS (CIA30 domain-containing protein n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7PJD9_MORIS) HSP 1 Score: 86.7 bits (213), Expect = 5.190e-18 Identity = 43/108 (39.81%), Postives = 64/108 (59.26%), Query Frame = 1 Query: 61 DLDLFQGFQMRIRGDGRKYEVNVESQTTIPNDVYQGYLHLPQ-GEWTTVALPFERLLLTGRGQVRFHQRIMDWAKLHSIGFSLADGIEGPFQLDVAWIAAVQEVHTLG 381 D LF+ MR+RGD R+Y VN+++ I D+YQ L L G+W TV +PF +LT G ++ Q M K+ ++G S+AD EGPF++++ WI A+ T G Sbjct: 138 DTTLFRYLAMRVRGDDRRYFVNIQTDGVIQTDLYQHRLFLQNAGQWQTVMIPFRDFVLTNNGMIQEDQIDMMREKVKTVGISIADREEGPFEIEIDWIKAMNTESTEG 245 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10252.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10252.2.1 >prot_C-tenellus_contig10252.2.1 ID=prot_C-tenellus_contig10252.2.1|Name=mRNA_C-tenellus_contig10252.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=133bp AQAKFAGFCGSRPPRRLNPLDLDLFQGFQMRIRGDGRKYEVNVESQTTIPback to top mRNA from alignment at C-tenellus_contig10252:4262..5523+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10252.2.1 ID=mRNA_C-tenellus_contig10252.2.1|Name=mRNA_C-tenellus_contig10252.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1262bp|location=Sequence derived from alignment at C-tenellus_contig10252:4262..5523+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10252:4262..5523+ >mRNA_C-tenellus_contig10252.2.1 ID=mRNA_C-tenellus_contig10252.2.1|Name=mRNA_C-tenellus_contig10252.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=399bp|location=Sequence derived from alignment at C-tenellus_contig10252:4262..5523+ (Choristocarpus tenellus KU2346)back to top |