mRNA_C-tenellus_contig10239.1.2 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10239.1.2 vs. uniprot
Match: D8LRR2_ECTSI (Threonylcarbamoyl-AMP synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRR2_ECTSI) HSP 1 Score: 203 bits (517), Expect = 3.480e-53 Identity = 124/263 (47.15%), Postives = 155/263 (58.94%), Query Frame = 1 Query: 490 HCSATQAAHVLEDLGESDITILDGDEAGACEIGIESTVVKVDIPNTRLVVLRQGCVTEPQLRQALLEGGGLFSKFSVEIALTNSKDKPPHGEKSGEG-LRGEAGGELGSD-------------MKTQSPGQLLQHYSPYLETYLVVMGDMTVAATNSVQTRESTEGLAHKNDFNLPGLASTSVVIDFGGQLQALRGTALAYKDLSPGGDAKEAAVGLFRSLRWAEAHASAERLLILGLPSRSNDDLSGAVNDRIYRAASGKVI 1236 H S TQA HV+EDLG SDI +LDGD +GAC +GIESTV K+D N R+++LR G VT+ ++R AL EGG FS SV GE+ E RG E D + + GQLL+HYSP LE + V+ + V E + L +A TSVV+DF GQL+ L+ +A+AY DLS G A EAA GLFR+LRWAE SA+RLLI GLPS+SN D++ AVNDRIYR+ASGK I Sbjct: 197 HVSPTQAMHVMEDLGGSDILVLDGDTSGACGVGIESTVAKIDAANDRILILRMGGVTQDRIRDALKEGGEEFSGISVYAGSVAGGKTEAKGEEEREREARGSLKDEPAKDEGQAPGLMRQLCAISDATTGQLLRHYSPDLEVFRVLGATPGSTSGRMVGGGELAD---------LASMARTSVVVDFAGQLKGLQASAVAYSDLSIEGSADEAAKGLFRALRWAETQPSAQRLLIAGLPSKSNGDMAAAVNDRIYRSASGKTI 450
BLAST of mRNA_C-tenellus_contig10239.1.2 vs. uniprot
Match: A0A835YWE4_9STRA (Threonylcarbamoyl-AMP synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWE4_9STRA) HSP 1 Score: 143 bits (360), Expect = 4.540e-33 Identity = 98/260 (37.69%), Postives = 131/260 (50.38%), Query Frame = 1 Query: 490 HCSATQAAHVLEDLGESDITILDGDEAGACEIGIESTVVKVDIPNTRLVVL-------RQGCVTEPQLRQALLEGGGLFSKFSVEIALTNSKDKPPHGEKSGEGLRGEAGGELGSDMKTQSPGQLLQHYSPYLETYLVVMGDMTVAATNSVQTRESTEGLAHKNDFNLPGLAST----SVVIDFGGQLQALRGTALAYKDLSPGGDAKEAAVGLFRSLRWAEAHASAERLLILGLPSRSNDDLSGAVNDRIYRAASGKVI 1236 H S T AAHVL DLG S +TI+DG A C +GIESTV K+ +P R+G VT L ALL GG F ++V ++ + + ++PGQLL+HYSP LE + + + + + F + T SVVIDF G+L AL AY+DLSP G A EAA +F +LRWAEA+ AER+L+ LP+ S L+ AVNDR+ RAASGK++ Sbjct: 159 HVSPTSAAHVLADLGASRVTIVDGG-AATCAVGIESTVAKL-VPRAAXXXXXXXXXXXRRGAVTAEALAGALLAGG--FDGWAVRVSRARGAEDEAEAQ--------------------EAPGQLLRHYSPDLEAFNIASHSSHITHLHIIPP-----------SFFVSHTPRTPRCCSVVIDFNGRLSALSARCAAYRDLSPAGSADEAAKNIFEALRWAEAYVGAERVLMASLPAPSEGSLAAAVNDRMRRAASGKLV 383
BLAST of mRNA_C-tenellus_contig10239.1.2 vs. uniprot
Match: A0A482RR53_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RR53_9ARCH) HSP 1 Score: 135 bits (340), Expect = 1.470e-31 Identity = 98/264 (37.12%), Postives = 142/264 (53.79%), Query Frame = 1 Query: 490 HCSATQAAHVLEDLGESDITILDGDEAG-----ACEIGIESTVVKVDIPNTRLVVLRQGCVTEPQLRQALLEGGGLFSKFSVEIALTNSKDKPPHGEKSGEGLRGEAGGELGSDMKTQSPGQLLQHYSPYLETYLVV-MGDMTVAATNSVQTRESTEGLAHKNDFNLPG--LASTSVVIDFGGQLQALRGTALAYKDLSPGGDAKEAAVGLFRSLRWAEAHASAERLLILGLPSRSND------DLSGAVNDRIYRAASGKVIQ 1239 H S T+A+HVL+DL E + +L+G+ +CE GIESTVVK+D +++L+V RQG V++ QL Q L L +V + N D+ + GE +PGQ + HY+P + YLV + D T ++ + + + L H ND ++ L +VVIDFG QL AL G LAY+DLS DA EAA LF +LRWAE +A+ +L+ + +S DLS + DR++RAASG +Q Sbjct: 26 HVSPTRASHVLDDLAEKGVKVLNGESKAFPIDLSCEFGIESTVVKLDAGHSQLLVYRQGAVSQ-QLLQDCLSQAALPWSTTVVTRVVNMHDQEEKKDSVGE----------------VAPGQAVTHYAPDVPCYLVQGVYDSTNSSNSDIMGNMGSIQLIH-NDLHVSSSTLQGGAVVIDFGQQLHALAGQVLAYRDLSASKDAAEAARNLFDTLRWAETVVNAKVVLLARIDDQSVSSKLSEMDLSLGLADRVFRAASGISVQ 271
BLAST of mRNA_C-tenellus_contig10239.1.2 vs. uniprot
Match: A0A2R5G8H5_9STRA (Threonylcarbamoyl-AMP synthase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G8H5_9STRA) HSP 1 Score: 137 bits (345), Expect = 8.310e-31 Identity = 105/289 (36.33%), Postives = 158/289 (54.67%), Query Frame = 1 Query: 445 LGKSTLPLYPPSF*P--HCSATQAAHVLEDLGESDITILDGD--EAGACEIGIESTVVKVDIPNT---------RLVVLRQGCVTEPQLRQALLEGGGLFSKFSVEIALTNSKDKPPHGEKSGEG-LRGEAGGELG-----SDMKTQSPGQLLQHYSPYLETYLVVMGDMTVAAT-----NSVQTRESTEGLAHKNDFN--LPGLASTSVVIDFGGQLQALRGTALAYKDLSPGGDAKEAAVGLFRSLRWAEAHASAERLLILGLPSRSNDDLSGAVNDRIYRAASGKV 1233 L +S +P+ PS H S T A HVL+DLG+ D+ ++DG E G C +GIESTV+KV P+ LV+ R+G V E ++R+ L G F + +S KP +S + A G D+ T +PGQL+ HY+P ++T+L+ D ++ T +S++ + + +ND + + LAS VV+DFGG LQ L+ + LAY++LS GDA EAA LF +LRW E+ A+ +L+ S + L+ +V DR++RAASGKV Sbjct: 137 LEESNVPVAAPSANRFGHVSPTTADHVLDDLGDQDVMVVDGGPVELGTCSVGIESTVLKVADPSAADDDDTAPRELVLFRKGGVPEAEIRRVLDSAG--FVNTQIVAPSKSSASKPSEESQSRDASATASAPANPGHAVEDDDVATMAPGQLITHYAPDVDTWLLEKSDAALSETEVSGQSSLRLERACDA---ENDASAQVVNLASC-VVLDFGGALQPLQSSVLAYRELSQSGDAAEAARELFSALRWTES-TEAKHVLVQDA-SHAKGALAASVADRMFRAASGKV 417
BLAST of mRNA_C-tenellus_contig10239.1.2 vs. uniprot
Match: H3GAE3_PHYRM (Threonylcarbamoyl-AMP synthase n=16 Tax=Phytophthora TaxID=4783 RepID=H3GAE3_PHYRM) HSP 1 Score: 135 bits (340), Expect = 1.030e-30 Identity = 99/300 (33.00%), Postives = 150/300 (50.00%), Query Frame = 1 Query: 343 TAVY*CNPTQ*LELTPTPQPLPLLCVTCFIACF*LGKSTLPLYPPSF*P--HCSATQAAHVLEDLGE-SDITILDGDEAGACEIGIESTVVKVDIPNTRLVVLRQGCVTEPQLRQALLEGGGLFS-KFSVEIALTNSKDKPPHGEKSGEGLRGEAGGELGSDMKTQSPGQLLQHYSPYLETYLVVMGDMTVAATNSVQTRESTEGLAHKNDFNLPGLASTSVVIDFGGQLQALRGTALAYKDLSPGGDAKEAAVGLFRSLRWAEAHASAERLLILGLPSRSNDDLSGAVNDRIYRAASGK 1230 T + P L L+ + L C IA L ++ +P+ PS H S T A HV++DLG +++++++ DE G CE+GIESTVVK+ +L+V R+G V+E L Q L + L ++ V +K + + Q+PGQ++ HY+P ++TYL +G A + D + S VVIDF G+L L+ AY DLSP GD EA+ +F SLRW+E ER++I G+ S ++ + A++DR+YRAASGK Sbjct: 97 TLIAKAVPELPLTLSANTGFVGLRCPKHPIAQALLKEAKVPVAAPSANRFGHVSPTTAKHVMDDLGACANLSVIEADEEGCCEVGIESTVVKIVPEERKLIVFRRGGVSELALEQVLQKNAELLGGRYEVVTIQKEAK--------------------MQTKEAQQAPGQMITHYAPDVDTYLYQVG------------------AAEEMDASSKQDVSRWVVIDFNGKLARLKDRVRAYLDLSPSGDVAEASQRIFDSLRWSENVQGVERVVITGVASEHHEQ-AAALHDRMYRAASGK 357
BLAST of mRNA_C-tenellus_contig10239.1.2 vs. uniprot
Match: A0A8J6C1I1_DIALT (Threonylcarbamoyl-AMP synthase n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C1I1_DIALT) HSP 1 Score: 134 bits (338), Expect = 3.950e-30 Identity = 99/290 (34.14%), Postives = 142/290 (48.97%), Query Frame = 1 Query: 415 CVTCFIACF*LGKSTLPLYPPSF*P--HCSATQAAHVLEDLGESDITILDGDEAGACEIGIESTVVKVDIPNTRLVVLRQGCVTEPQLRQALLEGGGLFSKFSVEIALTNSKDKPPHGEKSGEGLRGEAGGELGSDMKTQSPGQLLQHYSPYLETYLVV-MGDMTVAATNSVQTRESTEGLAHKNDFNL------------PGLASTSVVIDFGGQLQALRGTALAYKDLSPGGDAKEAAVGLFRSLRWAEAHASAERLLILGLPS-RSNDDLSGAVNDRIYRAASGKVI 1236 C +A L ++ +P+ PS H S T A HVL+DLG DI +LD A C++GIESTV ++D+ +L+VLR+G ++E LR AL G +E+ ++ P L + +PGQLL HY+P + T+L + + ND + P LA+T V IDFGG L G AY+DLSP G EA+ LF +LRWAE+ A A R+LI + + R D+ GA+ DR++RAASG+ + Sbjct: 131 CPAHAVAVALLREAAIPVAAPSANRFGHVSPTSAQHVLDDLGAHDIAVLD---APGCDVGIESTVARIDVSQAQLLVLRRGGISERALRAALAAAG-----LELEVVARAAEHTPAA---------------LADGVAAHAPGQLLTHYAPDVPTFLALPQRGVDGGGAXXXXXXXXXXXXXXPNDASTAAEPAATAASAAPTLAATCV-IDFGGAFAPLIGRCAAYRDLSPSGSVGEASRRLFETLRWAESTAGARRVLIADVMALRVEDEHVGALYDRMFRAASGRRV 396
BLAST of mRNA_C-tenellus_contig10239.1.2 vs. uniprot
Match: G5A7T0_PHYSP (Threonylcarbamoyl-AMP synthase n=3 Tax=Phytophthora TaxID=4783 RepID=G5A7T0_PHYSP) HSP 1 Score: 132 bits (331), Expect = 1.560e-29 Identity = 97/299 (32.44%), Postives = 144/299 (48.16%), Query Frame = 1 Query: 343 TAVY*CNPTQ*LELTPTPQPLPLLCVTCFIACF*LGKSTLPLYPPSF*P--HCSATQAAHVLEDLGE-SDITILDGDEAGACEIGIESTVVKVDIPNTRLVVLRQGCVTEPQLRQALLEGGGLFSKFSVEIALTNSKDKPPHGEKSGEGLRGEAGGELGSDMKTQSPGQLLQHYSPYLETYLVVMGDMTVAATNSVQTRESTEGLAHKNDFNLPGLASTSVVIDFGGQLQALRGTALAYKDLSPGGDAKEAAVGLFRSLRWAEAHASAERLLILGLPSRSNDDLSGAVNDRIYRAASGK 1230 T + P L L+ + L C IA L + +P+ PS H S T A HV++DLG +++++++ DE G CE+GIESTVVK+ +L+V R+G V+E L Q L E L + + ++ + Q+PGQ++ HY+P ++TYL +S Q S VVIDF G+L L+ AY DLSP GD EA+ +F SLRW+E ER++I G+ S ++ + A++DR+YRAASGK Sbjct: 97 TLIAKAVPALPLTLSANTGFVGLRCPKHPIAQALLKAAQVPVAAPSANRFGHVSPTTAKHVMDDLGACTNLSVIEADETGCCEVGIESTVVKIVPEERKLIVFRRGGVSEQALSQVLKENAELLGGMYDVVTIQKEA-------------------KMQTKEAQQAPGQMITHYAPDVDTYLYQADAADEMDASSKQD------------------VSRWVVIDFRGKLVGLKDRVRAYMDLSPNGDVAEASQRIFDSLRWSENVQGVERVVITGVISEPHEQ-AAALHDRMYRAASGK 357
BLAST of mRNA_C-tenellus_contig10239.1.2 vs. uniprot
Match: A0A484E5W0_BRELC (Threonylcarbamoyl-AMP synthase n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E5W0_BRELC) HSP 1 Score: 129 bits (325), Expect = 9.900e-29 Identity = 105/300 (35.00%), Postives = 159/300 (53.00%), Query Frame = 1 Query: 343 TAVY*CNPTQ*LELTPTPQPLPLLCVTCFIACF*LGKSTLPLYPPSF*P--HCSATQAAHVLEDLGE-SDITILDGDEAGACEIGIESTVVKVDIPNTRLVVL-RQGCVTEPQLRQALLEGGGLFSKFSVEIALTNSKDKPPHGEKSGEGLRGEAGGELGSDMKTQSPGQLLQHYSPYLETYLVVMGDMTVAATNSVQTRESTEGLAHKNDFNLPGLASTSVVIDFGGQLQALRGTALAYKDLSPGGDAKEAAVGLFRSLRWAEAHASAERLLILGLPSRSNDDLSGAVNDRIYRAASGK 1230 T V P L L+ + L C IA L ++ +P+ PS H S T A HV++DLG +++++D G+CEIGIESTV+K+ +P R V+L R+G V+E L++ L E + V L +R EA ++ ++ Q+PGQL+ HY+P ++TYL V T++ +T ++E + N+ G VVIDF G+L L+ AY DLSP GD EA+ +F SLRWAE ER++I G+ ++ + A++DR++RAASGK Sbjct: 97 TLVAKAVPELPLSLSANTGFVGLRCPKHPIAQALLKEAKIPVAAPSANRFGHVSPTTAKHVMDDLGACKNLSVIDAAGEGSCEIGIESTVIKI-VPEERKVILFRRGGVSEQALKKVLEEHAEMLG---VRYELVT--------------IRNEA--KMQTNEGQQAPGQLITHYAPDVDTYLYV--------TDATKTMNASE------NENVSGW----VVIDFHGKLVRLKNRVRAYLDLSPTGDVAEASQRIFDSLRWAENVQGVERVIITGVIMEPHEQ-AAALHDRMFRAASGK 357
BLAST of mRNA_C-tenellus_contig10239.1.2 vs. uniprot
Match: A0A7S1Z841_TRICV (Threonylcarbamoyl-AMP synthase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z841_TRICV) HSP 1 Score: 129 bits (323), Expect = 6.410e-28 Identity = 96/281 (34.16%), Postives = 138/281 (49.11%), Query Frame = 1 Query: 490 HCSATQAAHVLEDLGESDITILD------------------GDEAGACEIGIESTVVKVDIPN-TR--LVVLRQGCVTEPQLRQALLEGGGLFSKFSVEIALTNSKDKPPHGEKSGEGLRGEAGGELGSDMKTQSPGQLLQHYSPYLETYLVVMGDM-TVAATNSVQTRESTEGLAHKNDFNLPGLASTSVVIDFGGQLQALRGTALAYKDLSPGGDAKEAAVGLFRSLRWAEAHASAERLLILGLPS--------RSNDDLSGAVNDRIYRAASGKVIQG 1242 H S T+A HVL+DLG D+ ++D D G C++G+ESTV KV++ + TR + VLR G V+ +R+AL GL +F V + + D P+ +PGQ ++HYSP + +Y + G TN + TE + D L + V+DFGG+L AL ALAY+DLS G +KEAA +F +LRWAE AER+ +P + +D LS AV DR+ RAASG+++ G Sbjct: 186 HVSPTRADHVLDDLGGEDVWVIDPGMTEQDGDGSAVNGQAAADIRGVCDVGVESTVAKVEMTSATRGAVTVLRHGAVSALDIRRALT-AAGLGDEFEVTSLVRATADHVPN----------------------VAPGQTIRHYSPRVRSYAISAGRYGRWTQTNGDGASDLTE---EETD-----LLRRAAVVDFGGRLSALAKDALAYRDLSVQGSSKEAASAVFEALRWAEDVGGAERVYFPEIPKSGEGEGDEKDDDALSDAVRDRLTRAASGEIVDG 435
BLAST of mRNA_C-tenellus_contig10239.1.2 vs. uniprot
Match: A0A0P1AFL6_PLAHL (Threonylcarbamoyl-AMP synthase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AFL6_PLAHL) HSP 1 Score: 127 bits (318), Expect = 8.310e-28 Identity = 96/303 (31.68%), Postives = 154/303 (50.83%), Query Frame = 1 Query: 343 TAVY*CNPTQ*LELTPTPQPLPLLCVTCFIACF*LGKSTLPLYPPSF*P--HCSATQAAHVLEDLGESD-ITILDGDEAGACEIGIESTVVKVDIPNTRLVVLRQGCVTEPQLRQALLEG----GGLFSKFSVEIALTNSKDKPPHGEKSGEGLRGEAGGELGSDMKTQSPGQLLQHYSPYLETYLVVMGDMTVAATNSVQTRESTEGLAHKNDFNLPGLASTSVVIDFGGQLQALRGTALAYKDLSPGGDAKEAAVGLFRSLRWAEAHASAERLLILGLPSRSNDDLSGAVNDRIYRAASGK 1230 T + P L L+ + + L C IA L ++ +P+ PS H S T A HV++DLG + +++++ E G C+IGIESTVVK+ +L++ R+G V++ L + L + GG + ++E + ++ + Q+PGQ++ HY+P ++TYL ++ E L ++ N+ S V+IDF G+L L+ AY DLSP GD EA+ +F SLRWAE ER++I G+ S S++ + A++DR+YRAASGK Sbjct: 97 TLIAKAVPELPLYLSASTGFVGLRCPNHPIAQALLKEAKVPIAAPSANRFGHVSPTTAKHVMDDLGACENLSVIEATEEGCCQIGIESTVVKIVAEERKLIIFRRGGVSKHALVKVLQDNAEILGGQYEVVTIEKEV-----------------------KMQTKEAQQAPGQMITHYAPDVDTYLYQF--------------DAPEELDASDNENV----SHWVIIDFHGKLAKLKHRVRAYCDLSPTGDIAEASQRIFDSLRWAECVQDVERVIITGVISESHEQ-AAALHDRMYRAASGK 357 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10239.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10239.1.2 >prot_C-tenellus_contig10239.1.2 ID=prot_C-tenellus_contig10239.1.2|Name=mRNA_C-tenellus_contig10239.1.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=144bp MKTQSPGQLLQHYSPYLETYLVVMGDMTVAATNSVQTRESTEGLAHKNDFback to top mRNA from alignment at C-tenellus_contig10239:54..5368+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10239.1.2 ID=mRNA_C-tenellus_contig10239.1.2|Name=mRNA_C-tenellus_contig10239.1.2|organism=Choristocarpus tenellus KU2346|type=mRNA|length=5315bp|location=Sequence derived from alignment at C-tenellus_contig10239:54..5368+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10239:54..5368+ >mRNA_C-tenellus_contig10239.1.2 ID=mRNA_C-tenellus_contig10239.1.2|Name=mRNA_C-tenellus_contig10239.1.2|organism=Choristocarpus tenellus KU2346|type=CDS|length=432bp|location=Sequence derived from alignment at C-tenellus_contig10239:54..5368+ (Choristocarpus tenellus KU2346)back to top |