mRNA_C-tenellus_contig10235.1.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig10235.1.1
Unique NamemRNA_C-tenellus_contig10235.1.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
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BLAST of mRNA_C-tenellus_contig10235.1.1 vs. uniprot
Match: D7G8A6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8A6_ECTSI)

HSP 1 Score: 266 bits (679), Expect = 3.690e-79
Identity = 122/170 (71.76%), Postives = 144/170 (84.71%), Query Frame = 3 
Query:  258 MSELKPFVLAAEIIGHEGPVRAVHGLADGRLASASQDATARVWIPR-GK-DGSANMYFDMEGTLSDHNHWVIALTSILAGVLPDCPQGGLVTGCLDKVIRVYDHMGKLQRKLTGHEGGVISFSWTVGGQLISGSWDGTAKVWDVAAGTCMATLGGHENGVCVLGLPDGKV 761
            MS+ +PF L+AE++GHEGPVRAV  L DGRLASASQD TAR+W P+ GK +G   +Y+D+  TL+DHNHWV++L ++  G++P+CPQGGLVTGCLDK++RVYDH GK QR L GHEGGVISFSWT  GQLISGSWDGTAKVWDVA G C+ TLGGHENGVCVLGLPDGKV
Sbjct:    1 MSDFQPFALSAEMLGHEGPVRAVQALLDGRLASASQDHTARLWTPKDGKSEGGGGVYYDIGETLADHNHWVVSLAALPPGIVPECPQGGLVTGCLDKLVRVYDHQGKQQRMLQGHEGGVISFSWTAAGQLISGSWDGTAKVWDVAGGVCVFTLGGHENGVCVLGLPDGKV 170
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BLAST of mRNA_C-tenellus_contig10235.1.1 vs. uniprot
Match: A0A836CND0_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CND0_9STRA)

HSP 1 Score: 169 bits (429), Expect = 9.090e-44
Identity = 86/170 (50.59%), Postives = 115/170 (67.65%), Query Frame = 3 
Query:  258 MSELKPFVLAAEIIGHEGPVRAVHGLADGRLASASQDATARVWIPRGKDGSANMYFDMEGTLSDHNHWVIALTSILAGVLPDCPQGGLVTGCLDKVIRVYDHMGKLQRKLTGHEGGVISFSWTVGGQ-LISGSWDGTAKVWDVAAG-TCMATLGGHENGVCVLGLPDGKV 761
            M +   F+LAAE++GHEGPVR+V  L +G +A+ +QD TA+VW+   K G A  Y D+  TL +H HWV ++  +   +LP+  +GG+VTG LD +IR+++  G   R L GHE GVIS  W  GG+ L+SGSWDGTA+VWD  AG  C   L GHENGVCVLGL +G +
Sbjct:    1 MGDNNVFMLAAELLGHEGPVRSVAALPEGCIATGAQDNTAKVWVST-KTGDAAFY-DVLLTLKEHTHWVTSVVELPPNLLPEAMEGGIVTGSLDSLIRIFNKTGVPLRCLEGHEKGVISLRWEAGGKRLLSGSWDGTARVWDFTAGCACTLVLPGHENGVCVLGLSNGTI 168
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BLAST of mRNA_C-tenellus_contig10235.1.1 vs. uniprot
Match: D8LHS1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHS1_ECTSI)

HSP 1 Score: 148 bits (374), Expect = 1.510e-39
Identity = 68/110 (61.82%), Postives = 85/110 (77.27%), Query Frame = 3 
Query:  315 VRAVHGLADGRLASASQDATARVWIPRGK--DGSANMYFDMEGTLSDHNHWVIALTSILAGVLPDCPQGGLVTGCLDKVIRVYDHMGKLQRKLTGHEGGVISFSWTVGGQ 638
            VRAV  L DGRLASASQD TAR+W P  +  +G+  +Y+D+  T +D NHWV++L ++L G++P+CPQGGLVTGCLDK+IRVYDH GK QR L GH+GGVI FSWT   Q
Sbjct:  135 VRAVQALPDGRLASASQDHTARLWTPEDEKSEGAGGVYYDIGDTFADDNHWVVSLAALLPGIVPECPQGGLVTGCLDKLIRVYDHQGKQQRMLQGHDGGVIYFSWTAADQ 244
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BLAST of mRNA_C-tenellus_contig10235.1.1 vs. uniprot
Match: K3WWM9_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WWM9_GLOUD)

HSP 1 Score: 154 bits (390), Expect = 1.740e-38
Identity = 81/165 (49.09%), Postives = 105/165 (63.64%), Query Frame = 3 
Query:  288 AEIIGHEGPVRAVHGLADGRLASASQDATARVWIPRG--KDGSANM---YFDMEG-TLSDHNHWVIALTSILAGVLPDCPQGGLVTGCLDKVIRVYDHMGKLQRKLTGHEGGVISFSWT-VGGQLISGSWDGTAKVWDVAAGTCMATLGGHENGVCVLGLPDGKV 761
            AE++GHEG VR+V  L +  + + + D+ AR WIP    +  +AN    Y  +E  T+ DH HWV A   I AGV+P+CP GG  TG +DK IRVY   G     LTGHEGGV S + +  G  L+SGSWDGTA+VWDV +  C+  L  HENGVCV+GLP+G +
Sbjct:   10 AELVGHEGAVRSVSVLVNDVVLTGAMDSVARCWIPEANAESDAANASSGYVSLESATIYDHEHWVTATLPIPAGVVPECPAGGFATGSMDKKIRVYSGDGARVAVLTGHEGGVTSLALSGCGKYLLSGSWDGTARVWDVQSKACVHVLPDHENGVCVIGLPNGTI 174
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BLAST of mRNA_C-tenellus_contig10235.1.1 vs. uniprot
Match: A0A8K1C6K2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C6K2_PYTOL)

HSP 1 Score: 150 bits (378), Expect = 7.230e-37
Identity = 80/164 (48.78%), Postives = 102/164 (62.20%), Query Frame = 3 
Query:  276 FVLAAEIIGHEGPVRAVHGLADGRLASASQDATARVWIPRGKDGSANMYFDME-GTLSDHNHWVIALTSILAGVLPDCPQGGLVTGCLDKVIRVYDHMGKLQRKLTGHEGGVISFSWTVGGQ-LISGSWDGTAKVWDVAAGTCMATLGGHENGVCVLGLPDGKV 761
            + L +E+  HEG VR++  L +  + + + D T   WI   +D S N Y  +   T+  H HWV AL  +   VL  CP GG VTGC+DK +RVYD  G L   L GHEGGVIS  +T   + L+SGSWDGTA+VWD+A   C+  L GHENGVCVLGLP+G V
Sbjct:    8 YRLQSELQQHEGAVRSICVLDNDVVVTGAMDTTVLSWI---RDPSDNSYGLLPTATIYGHEHWVTALAKLPPNVLATCPSGGFVTGCMDKAVRVYDLEGNLISILRGHEGGVISLGFTADYKYLLSGSWDGTARVWDLATMQCVHVLEGHENGVCVLGLPNGVV 168
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BLAST of mRNA_C-tenellus_contig10235.1.1 vs. uniprot
Match: A0A2R5GH77_9STRA (Guanine nucleotide-binding protein subunit beta-2-like 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GH77_9STRA)

HSP 1 Score: 139 bits (350), Expect = 4.310e-33
Identity = 73/163 (44.79%), Postives = 98/163 (60.12%), Query Frame = 3 
Query:  276 FVLAAEIIGHEGPVRAVHGLADGRLASASQDATARVWIPRGKDGSANMYFDMEGTLSDHNHWVIALTSILAGVLPDCPQGGLVTGCLDKVIRVYDHMGKLQRKLTGHEGGVISFSW-TVGGQLISGSWDGTAKVWDVAAGTCMATLGGHENGVCVLGLPDGKV 761
            F L  E+ GH+G +R +  L  GRL S S+D   +VW P  ++G     ++    L +H HWV  + + L G L      G VTGC D  IR YD  G ++  L GHEG V S  W T   +L+SGSWDGTA++WD+++GTC + L GHENGVCVL LP+G +
Sbjct:    2 FELVGELYGHQGDIRGLAALPGGRLVSGSRDRIGKVWRPV-REGKG---YEEVAALLEHEHWVSVVLA-LPGSL------GFVTGCQDHKIRWYDGDGNIKGTLLGHEGPVSSLDWNTASEELVSGSWDGTARIWDLSSGTCKSVLPGHENGVCVLALPNGSI 153
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BLAST of mRNA_C-tenellus_contig10235.1.1 vs. uniprot
Match: A0A3F2RGZ7_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RGZ7_9STRA)

HSP 1 Score: 135 bits (340), Expect = 8.970e-32
Identity = 73/164 (44.51%), Postives = 98/164 (59.76%), Query Frame = 3 
Query:  276 FVLAAEIIGHEGPVRAVHGLADGRLASASQDATARVWIPRGKDGSANMYFDMEG-TLSDHNHWVIALTSILAGVLPDCPQGGLVTGCLDKVIRVYDHMGKLQRKLTGHEGGVISFSWTVGGQLI-SGSWDGTAKVWDVAAGTCMATLGGHENGVCVLGLPDGKV 761
            + +  E+ GHEG VR +  L +  L + + D+ AR W+ R  +     +  ME  T+ DH HWV A  ++          GG  TG +DK IR++D  G+    L GHEGGVIS S +V G+L+ SGSWDGTA+VW ++   C+  L GHENGVCVLGLPDG V
Sbjct:    5 YDVNCELRGHEGAVRCISSLPNDLLVTGAMDSVARCWL-RDSNSLFGGFVAMESATIFDHEHWVTASVAL--------SSGGFATGSMDKRIRLFDAQGQRVAILEGHEGGVISLSTSVDGKLLLSGSWDGTARVWGLSTRQCLHVLRGHENGVCVLGLPDGSV 159
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BLAST of mRNA_C-tenellus_contig10235.1.1 vs. uniprot
Match: G4Z902_PHYSP (Uncharacterized protein n=7 Tax=Phytophthora TaxID=4783 RepID=G4Z902_PHYSP)

HSP 1 Score: 135 bits (339), Expect = 1.220e-31
Identity = 71/164 (43.29%), Postives = 97/164 (59.15%), Query Frame = 3 
Query:  276 FVLAAEIIGHEGPVRAVHGLADGRLASASQDATARVWIPRGKDGSANMYFDMEG-TLSDHNHWVIALTSILAGVLPDCPQGGLVTGCLDKVIRVYDHMGKLQRKLTGHEGGVISFSWTVGGQLI-SGSWDGTAKVWDVAAGTCMATLGGHENGVCVLGLPDGKV 761
            + +  E+ GHEG VR +  L +  L + + D+ ARVW+ R    +   +  ME  T+ DH HWV A  ++          GG  TG +DK IR++D  G+    L GHEGGVIS + +  G+L+ SGSWDGTA+VW +    C+  L GHENGVCVLGLPDG +
Sbjct:    5 YDVNCELRGHEGAVRCIAALPNDLLVTGAMDSVARVWL-RDSSSAVGGFVAMESATIFDHEHWVTASVAL--------DGGGFATGSMDKNIRLFDAQGQRYALLRGHEGGVISLTTSADGKLLLSGSWDGTARVWSLETQQCLHVLSGHENGVCVLGLPDGSL 159
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BLAST of mRNA_C-tenellus_contig10235.1.1 vs. uniprot
Match: A0A5D6XKC4_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XKC4_9STRA)

HSP 1 Score: 134 bits (338), Expect = 1.670e-31
Identity = 73/170 (42.94%), Postives = 100/170 (58.82%), Query Frame = 3 
Query:  258 MSELKPFVLAAEIIGHEGPVRAVHGLADGRLASASQDATARVWIPRGKDGSANMYFDMEG-TLSDHNHWVIALTSILAGVLPDCPQGGLVTGCLDKVIRVYDHMGKLQRKLTGHEGGVISFSWTVGGQ-LISGSWDGTAKVWDVAAGTCMATLGGHENGVCVLGLPDGKV 761
            M+    F L AE+ GH+G VRA+  L +  + + + DATA+ W+P    G    Y  +E  TL DH HWV A   +        P GG  TG +DK IR++        +L GH+GGVIS + +  G  L+SGSWDG+A+VWD+ +  C+  L GHENGVCVLGLP+G +
Sbjct:    1 MAAASVFRLRAELRGHDGAVRAICALENDVVLTGAMDATAKSWLPSADGG----YESLESATLYDHEHWVTAAVRL--------PGGGFATGAMDKKIRLFAADSTRVAELAGHDGGVISLALSACGTFLLSGSWDGSARVWDLRSRACVHVLAGHENGVCVLGLPNGVI 158
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BLAST of mRNA_C-tenellus_contig10235.1.1 vs. uniprot
Match: A0A6A3FTY8_9STRA (Uncharacterized protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3FTY8_9STRA)

HSP 1 Score: 133 bits (335), Expect = 2.190e-31
Identity = 75/166 (45.18%), Postives = 100/166 (60.24%), Query Frame = 3 
Query:  276 FVLAAEIIGHEGPVRAVHGLADGRLASASQDATARVWIPRGKDGSANM--YFDMEG-TLSDHNHWVIALTSILAGVLPDCPQGGLVTGCLDKVIRVYDHMGKLQRKLTGHEGGVISFSWTVGGQLI-SGSWDGTAKVWDVAAGTCMATLGGHENGVCVLGLPDGKV 761
            F +  E+ GHEG VR +  L +  L + + D+ ARVW+   +D SA    +  M+  T+ DH HWV A  S+  G       GG  TG +DK IR++D  G+    L GHEGGVIS + +  G+L+ SGSWDGTA+VW +    C+  L GHENGVCVLGLPDG +
Sbjct:    5 FDVNCELRGHEGAVRCISALPNDLLLTGAMDSVARVWL---RDSSAPFGGFVAMDSATIFDHEHWVTA--SVALG------GGGFATGSMDKNIRLFDAQGQRYALLRGHEGGVISLATSTDGKLLLSGSWDGTARVWSLETLQCLHVLSGHENGVCVLGLPDGSL 159
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10235.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8A6_ECTSI3.690e-7971.76Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CND0_9STRA9.090e-4450.59WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
D8LHS1_ECTSI1.510e-3961.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
K3WWM9_GLOUD1.740e-3849.09Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A8K1C6K2_PYTOL7.230e-3748.78Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2R5GH77_9STRA4.310e-3344.79Guanine nucleotide-binding protein subunit beta-2-... [more]
A0A3F2RGZ7_9STRA8.970e-3244.51Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
G4Z902_PHYSP1.220e-3143.29Uncharacterized protein n=7 Tax=Phytophthora TaxID... [more]
A0A5D6XKC4_9STRA1.670e-3142.94Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A6A3FTY8_9STRA2.190e-3145.18Uncharacterized protein n=2 Tax=Phytophthora fraga... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig10235contigC-tenellus_contig10235:2847..4920 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G8A6
Preferred namePLAA
PFAMsPFU,PUL,WD40
Model size954
Max annot lvl2759|Eukaryota
KEGG rclassRC00002,RC00010,RC00043,RC02750,RC02798,RC03314
KEGG koko:K01090,ko:K01955,ko:K11412,ko:K14018
KEGG ReactionR00256,R00575,R01395,R10948,R10949
KEGG Pathwayko00240,ko00250,ko01100,ko04141,map00240,map00250,map01100,map04141
KEGG ModuleM00051
Hectar predicted targeting categoryother localisation
GOsGO:0000726,GO:0001558,GO:0002237,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006082,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006303,GO:0006325,GO:0006464,GO:0006508,GO:0006511,GO:0006629,GO:0006631,GO:0006644,GO:0006690,GO:0006692,GO:0006693,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006914,GO:0006950,GO:0006952,GO:0006954,GO:0006974,GO:0006996,GO:0007154,GO:0007165,GO:0007275,GO:0007399,GO:0008047,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009605,GO:0009607,GO:0009617,GO:0009892,GO:0009987,GO:0010033,GO:0010498,GO:0010517,GO:0010518,GO:0010605,GO:0010720,GO:0010975,GO:0010976,GO:0010992,GO:0016004,GO:0016005,GO:0016043,GO:0016236,GO:0016567,GO:0016569,GO:0016570,GO:0016574,GO:0019222,GO:0019538,GO:0019637,GO:0019725,GO:0019752,GO:0019941,GO:0022008,GO:0022603,GO:0022604,GO:0023052,GO:0030154,GO:0030163,GO:0030234,GO:0030307,GO:0030334,GO:0030335,GO:0031323,GO:0031324,GO:0031344,GO:0031346,GO:0031396,GO:0031397,GO:0031399,GO:0031400,GO:0031982,GO:0032182,GO:0032268,GO:0032269,GO:0032429,GO:0032430,GO:0032446,GO:0032496,GO:0032501,GO:0032502,GO:0032787,GO:0032879,GO:0033554,GO:0033559,GO:0033993,GO:0034517,GO:0034641,GO:0035973,GO:0036211,GO:0040008,GO:0040012,GO:0040017,GO:0042221,GO:0042592,GO:0043085,GO:0043130,GO:0043161,GO:0043162,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043230,GO:0043231,GO:0043412,GO:0043436,GO:0043632,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044255,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044281,GO:0044421,GO:0044424,GO:0044464,GO:0045202,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0045927,GO:0046483,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048638,GO:0048639,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050767,GO:0050769,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051049,GO:0051050,GO:0051094,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051239,GO:0051240,GO:0051246,GO:0051248,GO:0051270,GO:0051272,GO:0051276,GO:0051336,GO:0051345,GO:0051603,GO:0051704,GO:0051707,GO:0051716,GO:0051960,GO:0051962,GO:0060191,GO:0060193,GO:0060229,GO:0060255,GO:0060284,GO:0060341,GO:0061912,GO:0061919,GO:0065007,GO:0065008,GO:0065009,GO:0070062,GO:0070647,GO:0070887,GO:0071216,GO:0071219,GO:0071222,GO:0071310,GO:0071396,GO:0071704,GO:0071840,GO:0072671,GO:0080090,GO:0090304,GO:0098693,GO:0098772,GO:0120035,GO:1900044,GO:1900045,GO:1901360,GO:1901564,GO:1901565,GO:1901568,GO:1901575,GO:1901700,GO:1901701,GO:1902914,GO:1902915,GO:1903320,GO:1903321,GO:1903421,GO:1903423,GO:1903561,GO:1903859,GO:1903861,GO:2000026,GO:2000145,GO:2000147,GO:2001222,GO:2001224
Exons4
Evalue8.83e-82
EggNOG OGsKOG0301@1|root,KOG0301@2759|Eukaryota
EC3.1.3.16,6.3.5.5
Descriptionphospholipase A2 activator activity
Cds size555
COG categoryA
BRITEko00000,ko00001,ko00002,ko01000,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig10235.1.1prot_C-tenellus_contig10235.1.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig10235 3104..4778 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789122.4331124-UTR-C-tenellus_contig10235:2846..31031680789122.4331124-UTR-C-tenellus_contig10235:2846..3103Choristocarpus tenellus KU2346UTRC-tenellus_contig10235 2847..3103 +
1680789122.4919286-UTR-C-tenellus_contig10235:4778..49201680789122.4919286-UTR-C-tenellus_contig10235:4778..4920Choristocarpus tenellus KU2346UTRC-tenellus_contig10235 4779..4920 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789122.447573-CDS-C-tenellus_contig10235:3103..31601680789122.447573-CDS-C-tenellus_contig10235:3103..3160Choristocarpus tenellus KU2346CDSC-tenellus_contig10235 3104..3160 +
1680789122.457993-CDS-C-tenellus_contig10235:3477..35981680789122.457993-CDS-C-tenellus_contig10235:3477..3598Choristocarpus tenellus KU2346CDSC-tenellus_contig10235 3478..3598 +
1680789122.472262-CDS-C-tenellus_contig10235:4145..43481680789122.472262-CDS-C-tenellus_contig10235:4145..4348Choristocarpus tenellus KU2346CDSC-tenellus_contig10235 4146..4348 +
1680789122.482224-CDS-C-tenellus_contig10235:4604..47781680789122.482224-CDS-C-tenellus_contig10235:4604..4778Choristocarpus tenellus KU2346CDSC-tenellus_contig10235 4605..4778 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig10235.1.1

>prot_C-tenellus_contig10235.1.1 ID=prot_C-tenellus_contig10235.1.1|Name=mRNA_C-tenellus_contig10235.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=185bp
MSELKPFVLAAEIIGHEGPVRAVHGLADGRLASASQDATARVWIPRGKDG
SANMYFDMEGTLSDHNHWVIALTSILAGVLPDCPQGGLVTGCLDKVIRVY
DHMGKLQRKLTGHEGGVISFSWTVGGQLISGSWDGTAKVWDVAAGTCMAT
LGGHENGVCVLGLPDGKVNIPPVVPPAEFLALVP*
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mRNA from alignment at C-tenellus_contig10235:2847..4920+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig10235.1.1 ID=mRNA_C-tenellus_contig10235.1.1|Name=mRNA_C-tenellus_contig10235.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2074bp|location=Sequence derived from alignment at C-tenellus_contig10235:2847..4920+ (Choristocarpus tenellus KU2346)
CTCTGAAGTCTGTAGAGCAGCCCTAGAGAAGTAAGGTTAAGACTCCATCG
ACTCAAAGAGACATCTGCAACCTACAATCTGCACTGACTTAGTACTGCAA
CTGGTGGGATCTGCTGGATGTGCGAGCAAATTTTAACCTGAGAGTGCGTT
GGTACCTTGCGCTAGACCTTTGTGCTTTGCAACCTTCAACTCTCTGTCAT
CGTACCCTGTCCCTGAGGATTGGAAAGGGGTGATCGTCAAGCCACGAACG
GGGAACAATGAGCGAATTAAAGCCTTTCGTCCTTGCTGCTGAGATTATCG
GACATGAGGGCCCGGTGAGCTTCATTGAGTTGTTTTGGAACGATCATTAC
ACCTTCGCTAGTCATCAAGACTCAAGGGGAGCAGAGTGGGGTTTGGAGGT
GTTTGGGTTGAGTTTATTGGGTTCATGCACGCGTTAGATGTTTTGCTTAT
GGAGCTGATCATTCTATGATATTCCGTCATGGTTGCAAGATGTCGTCTTT
TCCTCCTTTGCACTTTCTGTGCTTCATTGTACCCATGGCATGTCATTGAT
TTCTCAGGCGTCATGCTCAGGAAGCGGCAATCCCCCCTTCTCAGTTCAGC
TGATCGCGCAATGATTTATTTTGTGAGGCAGGTGCGAGCTGTGCATGGTC
TGGCGGATGGACGGCTGGCGTCTGCGTCACAAGATGCTACCGCGAGAGTA
TGGATTCCTAGGGGGAAAGATGGAAGCGCAAACATGTATTTTGATATGGA
AGGTAAGTTGAATGCAATGCAGTGCAGTATTCAGCGAGTTATACATGATA
TTTTTTGGAAAATTGCGAATAGCTCGAATGTCTCGGAGATTGCGCACTTG
TCATGTGCGTTCCTCACTCACTTCACATAAGCTCAAGTGGAGATTCGGAG
TCAGGACGCTGGTTTGAGTAACTGTGAAAGTCCATGTTCTCAAAAACGCA
CCATGCCAGTGCCTCCACCTGCATCTCCCCGTTTGCATTTCAAGGGGGAG
ATGTGTATGTCTATTGTGAGCACTATCAGGTTGCATGGATGCCCAGGGCC
GCGAACCGACACTCCCTTACATGCAGAGTGTATGCCTGTGGCTGGCCAAC
TATGTCACTTGTTGCTTTCTCTCACGACAGGAACGTAAAAACAGGAAACT
GCTAGGAGGAATGGAAACGTGCTTTAGCTGCAAAGGCGGTTTGTAAGAGG
AAACCTGACACGCGAGCCTTACTTGTATCATGGTCAGTGCCCACGTCCTT
GACCATCCCCCCCCGTTCACCCTCCCACTATATCACACATTTCCCTCAGG
AACTCTGTCAGATCACAACCATTGGGTGATTGCTCTCACATCAATCCTGG
CAGGGGTGCTACCTGATTGCCCACAAGGAGGCCTGGTTACAGGGTGCCTT
GACAAGGTCATTCGTGTGTATGACCACATGGGGAAGCTGCAGCGGAAGCT
CACAGGTCACGAAGGAGGAGTAATCTCGTTCAGCTGGACTGTAGGGGGCC
AGGTGTGGTGGCATACACTTGCATATATAATATGTACCCTTTGGATATAG
GAGAAGCATGCCTTAGTTGTCCATGCGTGGACATTTGTGTCATTGAATTG
TATCCCATTTTTTATGTCCAATTTCTCAGTGGTCACATCTGCAAATGCTC
TGTCACAAGTCCCTTGGTGATTGACACTCAATTTCTCACATACAAATGCA
CAAATCACCAATACATTTTCGTGTGTTCAATGCGCTTGTGCATACTTTCA
CCTGGTAGTTGATCAGTGGCAGCTGGGATGGGACGGCCAAGGTCTGGGAT
GTGGCAGCTGGCACATGTATGGCCACTCTGGGGGGGCACGAGAATGGCGT
TTGTGTGCTGGGACTGCCTGATGGGAAGGTGAATATTCCACCGGTTGTCC
CTCCAGCGGAATTTCTTGCTTTAGTCCCTTGAAGTAGGTGATTTTTGTTA
CAACATGACCCTTGAAACTCATGCCAATGTTAAAGGGTGCTAGACATGGT
CTGAAAAGTAACATTGATTACCCTGATCGTAAATGCTAGCCAACAGGATG
TATGTACTTTGCCAGCCTTTCTGT
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Coding sequence (CDS) from alignment at C-tenellus_contig10235:2847..4920+

>mRNA_C-tenellus_contig10235.1.1 ID=mRNA_C-tenellus_contig10235.1.1|Name=mRNA_C-tenellus_contig10235.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=555bp|location=Sequence derived from alignment at C-tenellus_contig10235:2847..4920+ (Choristocarpus tenellus KU2346)
ATGAGCGAATTAAAGCCTTTCGTCCTTGCTGCTGAGATTATCGGACATGA
GGGCCCGGTGCGAGCTGTGCATGGTCTGGCGGATGGACGGCTGGCGTCTG
CGTCACAAGATGCTACCGCGAGAGTATGGATTCCTAGGGGGAAAGATGGA
AGCGCAAACATGTATTTTGATATGGAAGGAACTCTGTCAGATCACAACCA
TTGGGTGATTGCTCTCACATCAATCCTGGCAGGGGTGCTACCTGATTGCC
CACAAGGAGGCCTGGTTACAGGGTGCCTTGACAAGGTCATTCGTGTGTAT
GACCACATGGGGAAGCTGCAGCGGAAGCTCACAGGTCACGAAGGAGGAGT
AATCTCGTTCAGCTGGACTGTAGGGGGCCAGTTGATCAGTGGCAGCTGGG
ATGGGACGGCCAAGGTCTGGGATGTGGCAGCTGGCACATGTATGGCCACT
CTGGGGGGGCACGAGAATGGCGTTTGTGTGCTGGGACTGCCTGATGGGAA
GGTGAATATTCCACCGGTTGTCCCTCCAGCGGAATTTCTTGCTTTAGTCC
CTTGA
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