mRNA_C-tenellus_contig10228.4.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10228.4.1 vs. uniprot
Match: D8LCI5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCI5_ECTSI) HSP 1 Score: 248 bits (632), Expect = 6.100e-74 Identity = 157/347 (45.24%), Postives = 200/347 (57.64%), Query Frame = 1 Query: 1 TRRGLDVSPTLFLCQSRTTSVDVMAVTNTTRPVTASS----ERRRTQVLLPHGCN---------------------------TSTNHAEAPTTTALAVKQTAAMRAKINKGMKRERQEFMQRLSHEREHRVHLESWAASRIQAIFRGYLVRPRPPRQRGRHHVSPEESNRLLLVDIQAILVGAGLPTIPGMSLDGRYLRSSNGGGWSRATLRPRSR--------------------KQRVMQHEQATQITRVVRGFLERRRVGYRWREWERTRQWEAAQLIQHAWRGYWKRKGWYDLESGLRDDAACMIQTRFRGMSCRMAIAIKKKNCFALKRKTEAATSIQAVVR 888 TRRGLD SP LFL +SRTT+VDVM+V+NTTRPV SS ERRR QV+LP+G T + + P TAL + R K + ++RER F+ RL+ ERE RV LE+WAAS IQA+FRG+L RPRPPR R R ++P ESNR L+ D+QAIL AGLPTIPG+ DGR ++S G W + +QR + E +T+ITRVVRGFLERRR G RW W+R R+ +A IQ+ WR Y KR GW +LES + D AA IQ R+RG++CRM +A K + KR+ +A +IQA R Sbjct: 76 TRRGLDSSPALFLWESRTTTVDVMSVSNTTRPVVVSSSRNSERRRIQVVLPYGVGSGAAGGXXXXXXXXXXXXASGRAGATGTMMSLLDPPNPTALEARLNENRRLKRGRDLRRERHAFLSRLTQEREERVLLEAWAASTIQALFRGFLARPRPPRPRPRKELTPAESNRRLVADLQAILARAGLPTIPGLGPDGR--KTSEGTAWGQGRXXXXXXXXXXXXXXXXXXXXXXXXXXRQRAFEDEMSTRITRVVRGFLERRRFGRRWAVWDRKRRRSSASRIQNCWRAYRKRMGWRELESEVMDRAAAKIQARWRGVACRMGLARKATDDALGKRRMVSAVTIQAAAR 420
BLAST of mRNA_C-tenellus_contig10228.4.1 vs. uniprot
Match: A0A6H5J9Z3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9Z3_9PHAE) HSP 1 Score: 178 bits (452), Expect = 8.280e-52 Identity = 104/218 (47.71%), Postives = 133/218 (61.01%), Query Frame = 1 Query: 172 EAPTTTALAVKQTAAMRAKINKGMKRERQEFMQRLSHEREHRVHLESWAASRIQAIFRGYLVRPRPPRQRGRHHVSPEESNRLLLVDIQAILVGAGLPTIPGMSLDGRYLRSSNGGGWSRAT-------------------LRPRSRKQRVMQHEQATQITRVVRGFLERRRVGYRWREWERTRQWEAAQLIQHAWRGYWKRKGWYDLESGLRDDAAC 768 + P TAL + RAK + ++ ER F+ RL+ ERE RV LE+WAAS IQA+FRG+L RPRP R R R ++P ESNR L+ D+QAIL AGLPTIPG+ DGR ++S G W + R RSR+QR + E +T+IT VVRGFLERRR G RW W+R R+W +A IQ+ WR Y KR GW +LES +A+C Sbjct: 6 DPPNPTALEARLNEDRRAKRGRNLRLERHAFLSRLTREREERVLLEAWAASTIQALFRGFLTRPRPKRPRPRKELTPAESNRRLVADLQAILARAGLPTIPGLGPDGR--KASEGTAWGQGRGATSXXXXXXXXXXXXXXLKRSRSRRQRAFEDEMSTRITSVVRGFLERRRFGRRWAVWDRKRRWSSASRIQNCWRAYRKRMGWRELES----EASC 217
BLAST of mRNA_C-tenellus_contig10228.4.1 vs. uniprot
Match: A0A7S2SCU3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SCU3_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 1.030e-11 Identity = 95/315 (30.16%), Postives = 140/315 (44.44%), Query Frame = 1 Query: 1 TRRGLDVSPTLFLCQSRTTSVDVMAVTNTTR----PVTASSERRRTQVL--LPHGCNTSTNHAE----APTTTALAVKQTAAMRAKINKGMKRERQEFMQRLSHEREHRVHLESWAASRIQAIFRGYLVRPRPP--------RQRGRHHVSPEESNRLLLVDIQAILVGAGLPTIPGMSLDGRYLRSSNGGGWSRATLRPRSRKQRVMQHEQATQITRVVRGFLERRRVGYRWREWERTRQWEAAQLIQHAWRGYWKRKGWYDL-ESGLRDDAACMIQTRFRGMSCRMAIAIKKKNCFALKRKTEAATSIQAVVR 888 TR + V+ + +RTT DV+ + NT+R TA + R L LP+ T AE T + A RAK+N+ M +ER EFM RL ER R+ E+ AA+ IQAIFRG+ RP P R+ + P LL + + G IPG++L + + R R+++ ++ AT + +VRG ++ R E RQ AA IQ RG R DL ++GL A IQ+R+R M + + + R+ AA+++QAVVR Sbjct: 97 TRAHVPVTSPFYSWSARTTHSDVICILNTSRLYREEATAPPKPTRRDRLCRLPYS-KPMTGPAEYLHPEEGETLYVSQMHARARAKLNREMLQERDEFMMRLQEERHSRLGQEAVAATSIQAIFRGFSTRPHPDSVVELQQQRRNAKRGAEPSVEAALL----KRLEGELGFEPIPGVTLSKKKRTKKQ---------QMRDRRKKNKENRSATAVQNLVRGRGAKKMTAQRRAVLEAERQENAAVRIQSLARGVAGRNRVKDLVKAGL----ATRIQSRYRAMQMSRKVEKLRHDKTQQSRQVAAASTLQAVVR 393
BLAST of mRNA_C-tenellus_contig10228.4.1 vs. uniprot
Match: A0A6A5A527_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5A527_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 2.210e-11 Identity = 90/302 (29.80%), Postives = 135/302 (44.70%), Query Frame = 1 Query: 10 GLDVSPTLFLCQSRTTSVDVMAVTNTTRPVTASSERRRTQVLLPHGCNTSTNHAEAPTTTALAVKQTAAMRAKINKGMKRERQEFMQRLSHEREHRVHLESWAASRIQAIFRGYLVRPRPPRQRGRHHVSPEESNRLLLVDIQAILVGAGLPTIPGMSLDGRYLRSSNGGGWSRATLRPRSRKQRVMQHEQATQITRVVRGFLERRR-VGYRWREWERTRQWEAAQLIQHAWRGYWKRKGWYDLESGLRDDAACMIQTRFRGMSCRMAIAIKKKNCFALKRK--------TEAATSIQAVVR 888 GL+ + F+ QSR TS DV+A+T TT +R Q LLP + P A + R ++NK + ER FM++L ER R LE WAA RIQA+FRGY VRP H + ++ R L + + +P ++ + RA + ++ +R H AT I V+ FL R + R + W ++Q A+RGY RK + + LR+ +A IQ+ RG+ R +A+ FA + + AAT+IQ +VR Sbjct: 16 GLEETHVTFISQSRLTSSDVLAITITTM------KRMLPQTLLPRSMSNGQMKLSLPA----APVTLSIPRKRMNKILHAERDAFMKKLYAERSTRTMLECWAAIRIQALFRGYRVRP--------HAKTIYDNRRANLPAVIRKELHEMHQNLPSHVVETKITDPWRQDIGVRAHGKREAKHRRDRLHHAATVIQACVKRFLARVAFIHLTSRHIDELVLWSVI-VVQAAYRGYSVRKRVAAMLTQLREVSAIKIQSLVRGVLGRERVALLHLERFAAQGEEPRRDYSGATAATTIQRLVR 298
BLAST of mRNA_C-tenellus_contig10228.4.1 vs. uniprot
Match: W4GKV4_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GKV4_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 7.860e-11 Identity = 89/302 (29.47%), Postives = 135/302 (44.70%), Query Frame = 1 Query: 10 GLDVSPTLFLCQSRTTSVDVMAVTNTTRPVTASSERRRTQVLLPHGCNTSTNHAEAPTTTALAVKQTAAMRAKINKGMKRERQEFMQRLSHEREHRVHLESWAASRIQAIFRGYLVRPRPPRQRGRHHVSPEESNRLLLVDIQAILVGAGLPTIPGMSLDGRYLRSSNGGGWSRATLRPRSRKQRVMQHEQATQITRVVRGFLERRR-VGYRWREWERTRQWEAAQLIQHAWRGYWKRKGWYDLESGLRDDAACMIQTRFRGMSCRMAIAIKKKNCFALKRK--------TEAATSIQAVVR 888 G++ + F+ QSR TS DV+A+T TT +R Q LLP + P A + R ++NK + ER FM++L ER R LE WAA RIQA+FRGY VRP H + ++ R L + + +P ++ + RA + ++ +R H AT I V+ FL R + R + W ++Q A+RGY RK + + LR+ +A IQ+ RG+ R +A+ FA + + AAT+IQ +VR Sbjct: 16 GIEETHVTFISQSRLTSSDVLAITITTM------KRMLPQTLLPRSMSNGQMKLSLPA----APVTLSIPRKRMNKILHAERDAFMKKLYAERSTRTMLECWAAIRIQALFRGYRVRP--------HAKTIYDNRRANLPAVIRKELHEMHQNLPSHVVETKITDPWRQDIGVRAHGKREAKHRRDRLHHAATVIQACVKRFLARVAFIHLTSRHIDELVLWSVI-VVQAAYRGYSVRKRVAAMLTQLREVSAIKIQSLVRGVLGRERVALLHLERFAAQGEEPRRDYSGATAATTIQRLVR 298
BLAST of mRNA_C-tenellus_contig10228.4.1 vs. uniprot
Match: A0A7S2V3G4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3G4_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 8.580e-9 Identity = 79/273 (28.94%), Postives = 123/273 (45.05%), Query Frame = 1 Query: 10 GLDVSPTLFLCQSRTTSVDVMAVTNTTRPVTASSER----RRTQVLLPH-GCNTSTNHAEAPTT---TALAVKQTAAMRAKINKGMKRERQEFMQRLSHEREHRVHLESWAASRIQAIFRGYLVRPRPPRQRGRHHVSPEESNRL----LLVDIQAILVGAGLPTIPGMSLDGRYLRSSNGGGWSRATLRPRSRKQRVMQHEQATQITRVVRGFLERRRVGYRWREWERTRQWEAAQLIQHAWRGYWKRKGWYDLESGLRDDAACMIQTRFRG 792 G+ SP +FL + T DVMA+ TT+ T S + + Q L + G +T H + T K+ MR + NK + +++ F QRL ER +++AA+RIQA+FRG R G +S R + +DIQ L P +PG +L S R +K ++ + +AT+I R FL R R ++ R+ EAA++IQ +W +RK + + +++ AA IQ FRG Sbjct: 39 GMTSSPVVFLLSNHCTHSDVMAIAPTTKMFTTSGPKLPFETKGQFLSAYEGPSTDLFHLPSELTMNDNPFDKKKAQYMRNRRNKKLWEQQELFFQRLKSERSEFDQKQNFAATRIQAVFRGSQAR----NTSGAVVISKRSHKRQDMEDIFLDIQESLYKCNQPPLPGHK---SFLMSK------------RPQKWKMYEAARATRIQAAARRFLARMRFVNMTQKVIEDRRNEAAKVIQGSWLRSQERKLFTKMALKMKNVAASKIQAAFRG 292
BLAST of mRNA_C-tenellus_contig10228.4.1 vs. uniprot
Match: A0A3R7E1I8_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7E1I8_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 5.310e-8 Identity = 47/118 (39.83%), Postives = 62/118 (52.54%), Query Frame = 1 Query: 10 GLDVSPTLFLCQSRTTSVDVMAVTNTTRPVTASSERRRTQVLLPHGCNTSTNHAEAPTTTALAVKQTAAMRAKINKGMKRERQEFMQRLSHEREHRVHLESWAASRIQAIFRGYLVRP 363 G++ + F+ QSR TS DV+A+T TT +R Q LLP + P A + R ++NK + ER FM++L ER R LE WAA RIQA+FRGY VRP Sbjct: 16 GIEETHVTFISQSRLTSSDVLAITITTM------KRMLPQTLLPRSMSNGQMKLSLPA----APVTLSIPRKRMNKILHAERDAFMKKLYAERSTRTMLECWAAIRIQALFRGYRVRP 123
BLAST of mRNA_C-tenellus_contig10228.4.1 vs. uniprot
Match: A0A329RFZ7_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329RFZ7_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 1.580e-7 Identity = 71/205 (34.63%), Postives = 101/205 (49.27%), Query Frame = 1 Query: 250 ERQEFMQRLSHEREHRVHLESWAASRIQAIFRGYLVRPRP---PRQRGRHHVSPEESNRLLLVDIQAILVGAGLPTIPGMSLDGRYLRSSNGGGWS---RATLRPRSRKQRVM---QHEQATQITRV---VRGFLER---RRVGYRWREWERTRQWEAAQLIQHAWRGYWKRKGWYDLESGLRDDAACMIQTRFRGMSCRMAIAI 819 ER FM +L+ ERE + LE WAA+RIQA FRG+ RPR R+ + + S RL L D+Q L +G ++P S S+G S R +R R+R++R Q E+ + + R+ VR FL + R + R R+ R A IQ +RGY+ R + L L+ DAA IQ RG R +A+ Sbjct: 168 ERDAFMAQLTREREEKTQLECWAATRIQACFRGFRSRPRVVAYARRMKKFALRTASSIRLDLADMQENLRMSG--SLPQES-------ESSGKETSLLWRQGVRDRARRKRGFKNRQEERQSAVIRIQACVRRFLAKIAYRHLVARARD---ERHLLAIVKIQSIYRGYYLRSWIHRLVPKLKHDAAVQIQVLVRGSQARERVAM 360
BLAST of mRNA_C-tenellus_contig10228.4.1 vs. uniprot
Match: W2Q2N6_PHYPN (Uncharacterized protein n=8 Tax=Phytophthora TaxID=4783 RepID=W2Q2N6_PHYPN) HSP 1 Score: 62.0 bits (149), Expect = 3.680e-7 Identity = 65/195 (33.33%), Postives = 86/195 (44.10%), Query Frame = 1 Query: 250 ERQEFMQRLSHEREHRVHLESWAASRIQAIFRGYLVRPRP---PRQRGRHHVSPEESNRLLLVDIQAIL-VGAGLPTIPGMSLDGRYLRSSNGGGWSRATLRPRSRKQRVMQHEQAT-QITRVVRGFLERRRVGYRWREWERTRQWEAAQLIQHAWRGYWKRKGWYDLESGLRDDAACMIQTRFRGMSCRMAIAI 819 ERQ FM +L+ ERE + LE WAA+RIQA FRG+ RPR R+ + + S RL L D+Q L + LP SL R G R R K R + + A +I VR FL + + A IQ +RGY+ R L L+ DAA IQ RG R +++ Sbjct: 166 ERQAFMAQLTREREEKAQLECWAATRIQACFRGFRSRPRVVAYARRMKKFAMRTASSIRLDLADMQESLRISGNLPEESESSLLWRQ-------GVKDRARRKRGFKNRQEERQSAAIRIQSWVRRFLAKIAYRHLVARARNENHLLAVVKIQSIYRGYYLRSWIERLVPTLKHDAAVQIQALVRGSQARERVSM 353
BLAST of mRNA_C-tenellus_contig10228.4.1 vs. uniprot
Match: A0A6A3LCH7_9STRA (EF-hand domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3LCH7_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 2.790e-6 Identity = 67/209 (32.06%), Postives = 97/209 (46.41%), Query Frame = 1 Query: 223 AKINKGMKRERQEFMQRLSHEREHRVHLESWAASRIQAIFRGYLVRPRP---PRQRGRHHVSPEESNRLLLVDIQAILVGAGLPTIPGMSLDGRYLRSSNGGG------WSRATLRPRSRKQRVMQ--HEQ----ATQITRVVRGFLERRRVGYRWREWERTRQWEAAQLIQHAWRGYWKRKGWYDLESGLRDDAACMIQTRFRGMSCR 804 A++++ + ER FM +L+ ERE + LE WAA+RIQA +RG+ RPR R+R + + RL L ++Q L L G GG W R ++ R+R++R ++ HE+ AT+I VR FL + G+ R A IQ A+RGY R L L+ +AA IQ RG R Sbjct: 154 ARLHRELLLERDAFMAQLAREREEKAQLECWAATRIQACYRGFTSRPRAVAYARRRNKLALRSVSCIRLDLAEMQERL-----------RLRGNLPEEGGTGGKEMPMLW-RQGVKDRARRKRDVKNRHEERQMAATRIQSCVRRFLAKIAYGHIVARARDERYLLAIVKIQSAFRGYSLRAWIQRLVPKLQYNAAVQIQALVRGSQAR 350 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10228.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10228.4.1 >prot_C-tenellus_contig10228.4.1 ID=prot_C-tenellus_contig10228.4.1|Name=mRNA_C-tenellus_contig10228.4.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=296bp TRRGLDVSPTLFLCQSRTTSVDVMAVTNTTRPVTASSERRRTQVLLPHGCback to top mRNA from alignment at C-tenellus_contig10228:2181..3346+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10228.4.1 ID=mRNA_C-tenellus_contig10228.4.1|Name=mRNA_C-tenellus_contig10228.4.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1166bp|location=Sequence derived from alignment at C-tenellus_contig10228:2181..3346+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10228:2181..3346+ >mRNA_C-tenellus_contig10228.4.1 ID=mRNA_C-tenellus_contig10228.4.1|Name=mRNA_C-tenellus_contig10228.4.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=888bp|location=Sequence derived from alignment at C-tenellus_contig10228:2181..3346+ (Choristocarpus tenellus KU2346)back to top |