mRNA_C-tenellus_contig10224.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10224.1.1 vs. uniprot
Match: A0A2I0UJS4_LIMLA (Cytosolic carboxypeptidase 6 n=1 Tax=Limosa lapponica baueri TaxID=1758121 RepID=A0A2I0UJS4_LIMLA) HSP 1 Score: 165 bits (417), Expect = 8.580e-46 Identity = 73/114 (64.04%), Postives = 87/114 (76.32%), Query Frame = 1 Query: 1 RVHPGETPSQFVIHGVIDFLVGNSQRARALRNKVMFKIIPMLNPDGVFNGNYRSSYLGFDLNRHWLNPSSWAQPEIFSVKQVVTKMYEDPAVNLDFYIDIHAHSIGTNSFMYGN 342 RVHPGETPS FV G+IDFLV A+ LR+ ++FKI PMLNPDGV+ GNYR S +GFDLNRHW NPS WA P + VKQ++ +MY +P +NL+FYIDIHAHS N FMYGN Sbjct: 40 RVHPGETPSSFVCQGIIDFLVSQHPIAKVLRDHLVFKIAPMLNPDGVYLGNYRCSLMGFDLNRHWANPSPWAHPTLHGVKQLIIEMYNNPKINLEFYIDIHAHSTMMNGFMYGN 153
BLAST of mRNA_C-tenellus_contig10224.1.1 vs. uniprot
Match: A0A7L2AIL8_9GRUI (CBPC6 carboxypeptidase (Fragment) n=3 Tax=Neognathae TaxID=8825 RepID=A0A7L2AIL8_9GRUI) HSP 1 Score: 167 bits (422), Expect = 9.280e-46 Identity = 74/114 (64.91%), Postives = 87/114 (76.32%), Query Frame = 1 Query: 1 RVHPGETPSQFVIHGVIDFLVGNSQRARALRNKVMFKIIPMLNPDGVFNGNYRSSYLGFDLNRHWLNPSSWAQPEIFSVKQVVTKMYEDPAVNLDFYIDIHAHSIGTNSFMYGN 342 RVHPGETPS FV G+IDFLV A+ LR+ ++FKI PMLNPDGV+ GNYR S +GFDLNRHW NPS WA P + VKQ++ +MY DP +NL+FYIDIHAHS N FMYGN Sbjct: 22 RVHPGETPSSFVCQGIIDFLVSQHPIAKVLRDHLVFKIAPMLNPDGVYLGNYRCSLMGFDLNRHWANPSPWAHPTLHGVKQLIIEMYNDPKINLEFYIDIHAHSTMMNGFMYGN 135
BLAST of mRNA_C-tenellus_contig10224.1.1 vs. uniprot
Match: UPI000E1C2769 (cytosolic carboxypeptidase 6-like n=1 Tax=Nothoprocta perdicaria TaxID=30464 RepID=UPI000E1C2769) HSP 1 Score: 167 bits (422), Expect = 9.280e-46 Identity = 74/114 (64.91%), Postives = 87/114 (76.32%), Query Frame = 1 Query: 1 RVHPGETPSQFVIHGVIDFLVGNSQRARALRNKVMFKIIPMLNPDGVFNGNYRSSYLGFDLNRHWLNPSSWAQPEIFSVKQVVTKMYEDPAVNLDFYIDIHAHSIGTNSFMYGN 342 RVHPGETPS FV G+IDFLV A+ LR+ ++FKI PMLNPDGV+ GNYR S +GFDLNRHW NPS WA P + VKQ++ +MY DP +NL+FYIDIHAHS N FMYGN Sbjct: 40 RVHPGETPSSFVCQGIIDFLVSQHPIAKVLRDHLVFKIAPMLNPDGVYLGNYRCSLMGFDLNRHWANPSPWAHPTLHGVKQLIIQMYNDPKINLEFYIDIHAHSTMMNGFMYGN 153
BLAST of mRNA_C-tenellus_contig10224.1.1 vs. uniprot
Match: A0A7L0PC45_9AVES (CBPC6 carboxypeptidase (Fragment) n=7 Tax=Neognathae TaxID=8825 RepID=A0A7L0PC45_9AVES) HSP 1 Score: 164 bits (414), Expect = 1.370e-45 Identity = 73/114 (64.04%), Postives = 87/114 (76.32%), Query Frame = 1 Query: 1 RVHPGETPSQFVIHGVIDFLVGNSQRARALRNKVMFKIIPMLNPDGVFNGNYRSSYLGFDLNRHWLNPSSWAQPEIFSVKQVVTKMYEDPAVNLDFYIDIHAHSIGTNSFMYGN 342 RVHPGETPS FV G+IDFLV A+ LR+ ++FKI PMLNPDGV+ GNYR S +GFDLNRHW NPS WA P + VKQ++ +MY +P +NL+FYIDIHAHS N FMYGN Sbjct: 22 RVHPGETPSSFVCQGIIDFLVSQHPIAKVLRDHLVFKIAPMLNPDGVYLGNYRCSLMGFDLNRHWGNPSPWAHPTLHGVKQLIIEMYNNPKINLEFYIDIHAHSTMMNGFMYGN 135
BLAST of mRNA_C-tenellus_contig10224.1.1 vs. uniprot
Match: A0A8C7A550_NOTPE (Cytosolic carboxypeptidase 6-like n=1 Tax=Nothoprocta perdicaria TaxID=30464 RepID=A0A8C7A550_NOTPE) HSP 1 Score: 167 bits (422), Expect = 1.420e-45 Identity = 74/114 (64.91%), Postives = 87/114 (76.32%), Query Frame = 1 Query: 1 RVHPGETPSQFVIHGVIDFLVGNSQRARALRNKVMFKIIPMLNPDGVFNGNYRSSYLGFDLNRHWLNPSSWAQPEIFSVKQVVTKMYEDPAVNLDFYIDIHAHSIGTNSFMYGN 342 RVHPGETPS FV G+IDFLV A+ LR+ ++FKI PMLNPDGV+ GNYR S +GFDLNRHW NPS WA P + VKQ++ +MY DP +NL+FYIDIHAHS N FMYGN Sbjct: 45 RVHPGETPSSFVCQGIIDFLVSQHPIAKVLRDHLVFKIAPMLNPDGVYLGNYRCSLMGFDLNRHWANPSPWAHPTLHGVKQLIIQMYNDPKINLEFYIDIHAHSTMMNGFMYGN 158
BLAST of mRNA_C-tenellus_contig10224.1.1 vs. uniprot
Match: A0A7L0P0X8_9PASS (CBPC6 carboxypeptidase (Fragment) n=2 Tax=Passeriformes TaxID=9126 RepID=A0A7L0P0X8_9PASS) HSP 1 Score: 166 bits (421), Expect = 1.420e-45 Identity = 74/114 (64.91%), Postives = 88/114 (77.19%), Query Frame = 1 Query: 1 RVHPGETPSQFVIHGVIDFLVGNSQRARALRNKVMFKIIPMLNPDGVFNGNYRSSYLGFDLNRHWLNPSSWAQPEIFSVKQVVTKMYEDPAVNLDFYIDIHAHSIGTNSFMYGN 342 RVHPGETPS FV G+IDFLV + A+ LR+ ++FKI+PMLNPDGV+ GNYR S +GFDLNRHW NPS WA P + VKQ+V MY +P +NL+FYIDIHAHS N FMYGN Sbjct: 23 RVHPGETPSSFVCQGIIDFLVSHHPIAKVLRDHLVFKIVPMLNPDGVYLGNYRCSLMGFDLNRHWANPSPWAHPTLHGVKQLVIDMYNNPKINLEFYIDIHAHSTMMNGFMYGN 136
BLAST of mRNA_C-tenellus_contig10224.1.1 vs. uniprot
Match: H0WQ90_OTOGA (Peptidase_M14 domain-containing protein n=2 Tax=Theria TaxID=32525 RepID=H0WQ90_OTOGA) HSP 1 Score: 165 bits (417), Expect = 1.770e-45 Identity = 74/114 (64.91%), Postives = 86/114 (75.44%), Query Frame = 1 Query: 1 RVHPGETPSQFVIHGVIDFLVGNSQRARALRNKVMFKIIPMLNPDGVFNGNYRSSYLGFDLNRHWLNPSSWAQPEIFSVKQVVTKMYEDPAVNLDFYIDIHAHSIGTNSFMYGN 342 RVHPGETPS FV G+IDFLV AR LR ++FKI PMLNPDGV+ GNYR S +GFDLNRHWL+PS WA P + VKQ++ +MY DP +L+FYIDIHAHS N FMYGN Sbjct: 17 RVHPGETPSSFVCQGIIDFLVSQHPVARVLREHLVFKIAPMLNPDGVYLGNYRCSLMGFDLNRHWLDPSPWAHPTLHGVKQLIVQMYNDPKTSLEFYIDIHAHSTMMNGFMYGN 130
BLAST of mRNA_C-tenellus_contig10224.1.1 vs. uniprot
Match: A0A7K6BFZ9_UPUEP (CBPC6 carboxypeptidase (Fragment) n=1 Tax=Upupa epops TaxID=57439 RepID=A0A7K6BFZ9_UPUEP) HSP 1 Score: 165 bits (417), Expect = 2.250e-45 Identity = 73/114 (64.04%), Postives = 87/114 (76.32%), Query Frame = 1 Query: 1 RVHPGETPSQFVIHGVIDFLVGNSQRARALRNKVMFKIIPMLNPDGVFNGNYRSSYLGFDLNRHWLNPSSWAQPEIFSVKQVVTKMYEDPAVNLDFYIDIHAHSIGTNSFMYGN 342 RVHPGETPS FV G+IDFLV A+ LR+ ++FKI PMLNPDGV+ GNYR S +GFDLNRHW NPS WA P + VKQ++ +MY +P +NL+FYIDIHAHS N FMYGN Sbjct: 21 RVHPGETPSSFVCQGIIDFLVSQHPIAKVLRDHLVFKIAPMLNPDGVYLGNYRCSLMGFDLNRHWANPSPWAHPTLHGVKQLIIEMYNNPKINLEFYIDIHAHSTMMNGFMYGN 134
BLAST of mRNA_C-tenellus_contig10224.1.1 vs. uniprot
Match: A0A7L3MXF0_9AVES (CBPC6 carboxypeptidase (Fragment) n=4 Tax=Neognathae TaxID=8825 RepID=A0A7L3MXF0_9AVES) HSP 1 Score: 165 bits (417), Expect = 2.320e-45 Identity = 73/114 (64.04%), Postives = 87/114 (76.32%), Query Frame = 1 Query: 1 RVHPGETPSQFVIHGVIDFLVGNSQRARALRNKVMFKIIPMLNPDGVFNGNYRSSYLGFDLNRHWLNPSSWAQPEIFSVKQVVTKMYEDPAVNLDFYIDIHAHSIGTNSFMYGN 342 RVHPGETPS FV G+IDFLV A+ LR+ ++FKI PMLNPDGV+ GNYR S +GFDLNRHW NPS WA P + VKQ++ +MY +P +NL+FYIDIHAHS N FMYGN Sbjct: 22 RVHPGETPSSFVCQGIIDFLVSQHPIAKVLRDHLVFKIAPMLNPDGVYLGNYRCSLMGFDLNRHWANPSPWAHPTLHGVKQLIIEMYNNPKINLEFYIDIHAHSTMMNGFMYGN 135
BLAST of mRNA_C-tenellus_contig10224.1.1 vs. uniprot
Match: A0A850WZP0_PIACA (CBPC6 carboxypeptidase (Fragment) n=2 Tax=Neognathae TaxID=8825 RepID=A0A850WZP0_PIACA) HSP 1 Score: 165 bits (417), Expect = 2.320e-45 Identity = 73/114 (64.04%), Postives = 87/114 (76.32%), Query Frame = 1 Query: 1 RVHPGETPSQFVIHGVIDFLVGNSQRARALRNKVMFKIIPMLNPDGVFNGNYRSSYLGFDLNRHWLNPSSWAQPEIFSVKQVVTKMYEDPAVNLDFYIDIHAHSIGTNSFMYGN 342 RVHPGETPS FV G+IDFLV A+ LR+ ++FKI PMLNPDGV+ GNYR S +GFDLNRHW NPS WA P + VKQ++ +MY +P +NL+FYIDIHAHS N FMYGN Sbjct: 22 RVHPGETPSSFVCQGIIDFLVSQHPIAKVLRDHLVFKIAPMLNPDGVYLGNYRCSLMGFDLNRHWANPSPWAHPTLHGVKQLIIEMYNNPKINLEFYIDIHAHSTMMNGFMYGN 135 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10224.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10224.1.1 >prot_C-tenellus_contig10224.1.1 ID=prot_C-tenellus_contig10224.1.1|Name=mRNA_C-tenellus_contig10224.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=397bp RVHPGETPSQFVIHGVIDFLVGNSQRARALRNKVMFKIIPMLNPDGVFNGback to top mRNA from alignment at C-tenellus_contig10224:452..5023+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10224.1.1 ID=mRNA_C-tenellus_contig10224.1.1|Name=mRNA_C-tenellus_contig10224.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=4572bp|location=Sequence derived from alignment at C-tenellus_contig10224:452..5023+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10224:452..5023+ >mRNA_C-tenellus_contig10224.1.1 ID=mRNA_C-tenellus_contig10224.1.1|Name=mRNA_C-tenellus_contig10224.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=1191bp|location=Sequence derived from alignment at C-tenellus_contig10224:452..5023+ (Choristocarpus tenellus KU2346)back to top |