mRNA_C-tenellus_contig10210.1.3 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10210.1.3 vs. uniprot
Match: D7G7C7_ECTSI (Putative Ntdin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7C7_ECTSI) HSP 1 Score: 139 bits (351), Expect = 1.540e-40 Identity = 69/119 (57.98%), Postives = 87/119 (73.11%), Query Frame = 1 Query: 1 MIEEVSPQFAHKFVQ-EGFAYIDVRTEEECANGHPSGSVCVPAFWHTGMGMKANPDFVKQVAQHNPCPSGKNTRLVIGCQMGSRSAAACEWLEESGYTTVFNVVGGYSSWARDESLPVE 354 M +EV PQFA+ VQ EG+AY+DVR + E +G P+G+V VPAF+ T GM NPDFV Q+A+ P K +LVIGCQMGSRSA A WLE +GY+ V N+ GG+S+WARD+SLPVE Sbjct: 1 MFDEVGPQFANNLVQQEGWAYVDVRADYEFEHGRPAGAVNVPAFFSTAQGMTVNPDFVDQIAEKFP---DKAAKLVIGCQMGSRSAQAAGWLENAGYSGVVNMEGGFSAWARDDSLPVE 116
BLAST of mRNA_C-tenellus_contig10210.1.3 vs. uniprot
Match: A0A6H5K3G8_9PHAE (Rhodanese domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3G8_9PHAE) HSP 1 Score: 138 bits (347), Expect = 2.920e-39 Identity = 67/119 (56.30%), Postives = 86/119 (72.27%), Query Frame = 1 Query: 1 MIEEVSPQFAHKFVQ-EGFAYIDVRTEEECANGHPSGSVCVPAFWHTGMGMKANPDFVKQVAQHNPCPSGKNTRLVIGCQMGSRSAAACEWLEESGYTTVFNVVGGYSSWARDESLPVE 354 M + V PQFA+ VQ EG+ Y+DVR + E +GHP+G+V VPAF+ T GM NPDFV Q+A+ P K +LVIGCQMGSRSA A WLE +GY+ + N+ GG+S+WARD+SLPVE Sbjct: 52 MFDGVGPQFANNLVQQEGWTYVDVRADYEFEHGHPAGAVNVPAFFSTAQGMTVNPDFVDQIAEKFP---DKAAKLVIGCQMGSRSAQAAGWLENAGYSGIVNMEGGFSAWARDDSLPVE 167
BLAST of mRNA_C-tenellus_contig10210.1.3 vs. uniprot
Match: A0A3M1KCZ5_9BACT (Rhodanese-like domain-containing protein n=1 Tax=Candidatus Dadabacteria bacterium TaxID=2080303 RepID=A0A3M1KCZ5_9BACT) HSP 1 Score: 104 bits (260), Expect = 1.590e-26 Identity = 52/115 (45.22%), Postives = 70/115 (60.87%), Query Frame = 1 Query: 4 IEEVSPQFA-HKFVQEGFAYIDVRTEEECANGHPSGSVCVPAFWHTGMGMKANPDFVKQVAQHNPCPSGKNTRLVIGCQMGSRSAAACEWLEESGYTTVFNVVGGYSSWARDESL 345 ++ V+P A H EG+ Y+DVRTE E GHP+GSVC+PAF T GM NP+F+ +H +T +V+GCQ G RSA A EWLE++GY TV N GG+ E++ Sbjct: 1 MQHVTPDEALHLVEDEGYVYLDVRTEAEFQAGHPAGSVCIPAFLRTPAGMAPNPEFLDIARRHLKL----DTPIVVGCQAGGRSAKAAEWLEQAGYQTVVNCSGGFGGGRDPETM 111
BLAST of mRNA_C-tenellus_contig10210.1.3 vs. uniprot
Match: A0A4Y7K3I3_PAPSO (Rhodanese domain-containing protein n=2 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7K3I3_PAPSO) HSP 1 Score: 99.0 bits (245), Expect = 1.130e-23 Identity = 50/116 (43.10%), Postives = 70/116 (60.34%), Query Frame = 1 Query: 7 EEVSPQFAHKFVQEGFAYIDVRTEEECANGHPSGSVCVPAFWHTGMGMKANPDFVKQVAQHNPCPSGKNTRLVIGCQMGSRSAAACEWLEESGYTTVFNVVGGYSSWARDESLPVE 354 + V AH+ VQ G Y+DVRT EE A GHP G+V VP + G GM NP+F+++V++H G++ +V+GCQ G RS A L +G++ V +V GGYS W + LP E Sbjct: 73 KSVHVSVAHELVQAGHRYLDVRTSEEFAAGHPPGAVNVPYLFRMGAGMANNPNFLEEVSKH----FGEDAAIVVGCQKGMRSLKAVADLSNAGFSGVIDVAGGYSEWTAN-GLPTE 183
BLAST of mRNA_C-tenellus_contig10210.1.3 vs. uniprot
Match: L1JUH6_GUITC (Rhodanese domain-containing protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JUH6_GUITC) HSP 1 Score: 94.4 bits (233), Expect = 1.050e-22 Identity = 46/95 (48.42%), Postives = 62/95 (65.26%), Query Frame = 1 Query: 46 EGFAYIDVRTEEECANGHPSGSVCVPAFWHTGMG-MKANPDFVKQVAQHNPCPSGKNTRLVIGCQMGSRSAAACEWLEESGYTTVFNVVGGYSSW 327 EGF Y+DVRT EE A GHP+ ++ +PAF TG G M + F+K + + P K+ +LVIGCQ G+RSA AC+WL E+GYT + G+S W Sbjct: 19 EGFTYVDVRTNEEFARGHPTDAINIPAFAITGDGPMPMSSTFLKLIQTNFP---NKDEKLVIGCQAGNRSAMACKWLSEAGYTNIVESNKGFSGW 110
BLAST of mRNA_C-tenellus_contig10210.1.3 vs. uniprot
Match: A0A2E8HLZ8_9BACT (Rhodanese n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A2E8HLZ8_9BACT) HSP 1 Score: 90.9 bits (224), Expect = 6.070e-21 Identity = 46/118 (38.98%), Postives = 71/118 (60.17%), Query Frame = 1 Query: 7 EEVSPQFAHKFVQEG-FAYIDVRTEEECANGHPSGSVCVPAFWHTGMGMKANPDFVKQVAQHNPCPSGKNTRLVIGCQMGSRSAAACEWLEESGYTTVFNVVGGYSSWARDESLPVER 357 +E+ P+ A + + E +AY+DVR+E E NGHPSG++ +P + +GM NPDF+ V + + +++GCQMGSRS A E L +G+T V NV+GG+ D+ VE+ Sbjct: 4 KEIRPEEAKRLMDESAYAYVDVRSEPEFLNGHPSGALNIPVLFPEALGMVPNPDFLTVVLAN----FDRQAPILLGCQMGSRSGRAAEILVAAGFTDVSNVLGGFGGARDDQGQVVEK 117
BLAST of mRNA_C-tenellus_contig10210.1.3 vs. uniprot
Match: E1ZKE9_CHLVA (Rhodanese domain-containing protein (Fragment) n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZKE9_CHLVA) HSP 1 Score: 89.0 bits (219), Expect = 1.250e-20 Identity = 48/107 (44.86%), Postives = 63/107 (58.88%), Query Frame = 1 Query: 13 VSPQFAHKFVQEGFAYIDVRTEEECANGHPSGSVCVPAFWHTGMGMKANPDFVKQVAQHNPCPSGKNTRLVIGCQMGSRSAAACEWLEESGYTTVFNVVGGYSSWAR 333 V Q A + V+ G Y+DVRT EE A GHP+G+ VP F G GM NPDF+KQ CP K ++ +GCQ G RS AA L ++G++ V N+ GG+S R Sbjct: 2 VDVQGASELVKGGVKYVDVRTAEEYAAGHPAGAANVPVFVKQGGGMAPNPDFLKQFEA--ACPD-KAAQVCVGCQSGKRSEAAARMLADAGFSGVVNMEGGFSGELR 105
BLAST of mRNA_C-tenellus_contig10210.1.3 vs. uniprot
Match: A0A2W4LW69_9PROT (Rhodanese-like domain-containing protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4LW69_9PROT) HSP 1 Score: 87.8 bits (216), Expect = 9.490e-20 Identity = 49/129 (37.98%), Postives = 72/129 (55.81%), Query Frame = 1 Query: 4 IEEVSPQFAHKFVQEGFAYIDVRTEEECANGHPSGSVCVPAFWHTGMGMKANPDFVKQVAQHNPCPSGKNTRLVIGCQMGSRSAAACEWLEESGYTTVFNVVGGYSS-----------WARDESLPVER 357 I+ V+P+ ++ +Q G Y+DVR+E+E A GHP G++ VP GM NPDF+ + + GKN RLV+GC+ G RS A E L +GYT V ++ G+ W++ E LPVE+ Sbjct: 3 IKSVTPEQTYELLQSGAVYVDVRSEQEFAEGHPPGALNVPIAHLGPGGMTPNPDFMSVIER----AFGKNERLVVGCKAGGRSRRAAELLVRAGYTDVSDMTAGWEGSRDPFGRPLPGWSKRE-LPVEK 126
BLAST of mRNA_C-tenellus_contig10210.1.3 vs. uniprot
Match: A0A800N310_9BACT (Rhodanese-like domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A800N310_9BACT) HSP 1 Score: 86.7 bits (213), Expect = 2.490e-19 Identity = 42/104 (40.38%), Postives = 61/104 (58.65%), Query Frame = 1 Query: 7 EEVSPQFAHKFVQEGFAYIDVRTEEECANGHPSGSVCVPAFWHTGMGMKANPDFVKQVAQHNPCPSGKNTRLVIGCQMGSRSAAACEWLEESGYTTVFNVVGGY 318 E + P+ A + G+ Y+DVRT EE GHP G+ +P + + GM+ N F+ V +H P +TR V+GC+ G RSA ACE +E+ GY + N+ GGY Sbjct: 4 ETILPEGASTRLTSGWVYLDVRTSEEYDEGHPPGAYNIPVAFMSPAGMEPNETFLSVVQRHFP----SDTRFVVGCKAGGRSARACEIMEQGGYVCLANMDGGY 103
BLAST of mRNA_C-tenellus_contig10210.1.3 vs. uniprot
Match: A0A7S4KUQ8_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4KUQ8_GUITH) HSP 1 Score: 89.0 bits (219), Expect = 8.110e-19 Identity = 45/100 (45.00%), Postives = 60/100 (60.00%), Query Frame = 1 Query: 58 YIDVRTEEECANGHPSGSVCVPAFWHTGMG-MKANPDFVKQVAQHNPCPSGKNTRLVIGCQMGSRSAAACEWLEESGYTTVFNVVGGYSSWARDESLPVE 354 ++D RTE+E NG G+V VPAF T G + DF+K++ Q P KN+++V+GCQ G RSA A WL E GYT + N GG+S W + LP E Sbjct: 207 FVDCRTEQEYDNGRVKGAVNVPAFLDTPQGRLPVREDFLKRMLQKFP---DKNSKIVVGCQRGIRSAEAASWLCEVGYTNIVNQDGGFSYWVTKKDLPTE 303 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10210.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10210.1.3 >prot_C-tenellus_contig10210.1.3 ID=prot_C-tenellus_contig10210.1.3|Name=mRNA_C-tenellus_contig10210.1.3|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=120bp MIEEVSPQFAHKFVQEGFAYIDVRTEEECANGHPSGSVCVPAFWHTGMGMback to top mRNA from alignment at C-tenellus_contig10210:589..2467+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10210.1.3 ID=mRNA_C-tenellus_contig10210.1.3|Name=mRNA_C-tenellus_contig10210.1.3|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1879bp|location=Sequence derived from alignment at C-tenellus_contig10210:589..2467+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10210:589..2467+ >mRNA_C-tenellus_contig10210.1.3 ID=mRNA_C-tenellus_contig10210.1.3|Name=mRNA_C-tenellus_contig10210.1.3|organism=Choristocarpus tenellus KU2346|type=CDS|length=360bp|location=Sequence derived from alignment at C-tenellus_contig10210:589..2467+ (Choristocarpus tenellus KU2346)back to top |