mRNA_C-tenellus_contig10152.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10152.1.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE) HSP 1 Score: 164 bits (414), Expect = 3.480e-46 Identity = 82/165 (49.70%), Postives = 100/165 (60.61%), Query Frame = 1 Query: 4 NARPDSAHSFDGKLGVWRVCAPKTADRTSKNHEKGNV-----------------------YEQDCTLDHVWYSKSYTEELLPAIKTKMPWLQGKQVVIQQDGATPHMGKGNSEILSGAGKTEGWSIRLVTQPSNSPDLNIVDMCFFRSLKCRVMREWFGSVEEMV 429 NARPD AH FDGK+G+WR+C +TA R+SK YE DCT+D WY Y + LLPAIK KMPWL+ K+VV+QQDGA+PH GKGN EIL+ AG GW + LVTQP+ SPDLNI D+ F SLK RV S++E+V Sbjct: 200 NARPDPAHDFDGKIGIWRICVIETAQRSSKKSTSSTAPSTRSGWREPPHGRNRPAIVQEEYEFDCTIDAEWYKDWYIDVLLPAIKEKMPWLRSKRVVVQQDGASPHTGKGNPEILNSAGIARGWLVELVTQPAQSPDLNINDLGCFASLKPRVWGVNAFSIDELV 364
BLAST of mRNA_C-tenellus_contig10152.1.1 vs. uniprot
Match: UPI000B8AB67D (uncharacterized protein LOC110800636 n=1 Tax=Spinacia oleracea TaxID=3562 RepID=UPI000B8AB67D) HSP 1 Score: 120 bits (302), Expect = 9.940e-29 Identity = 61/164 (37.20%), Postives = 99/164 (60.37%), Query Frame = 1 Query: 31 FDGKLGVWRVCAPKTADRTSKNHEKGNVYEQDCT-LDHVWYSKSYTEELLPAIKTKMPWLQGKQVVIQQDGATPHMGKGNSEILSGAGKTEGWSIRLVTQPSNSPDLNIVDMCFFRSLKCRVMREWFGSVEEMVKVIKKQYEEYDETILERAWQLLFVVYNQVL 519 FDGKLG++ A R+SKN E+G + + T + + +ELLPAI++K PW K ++IQQD + PH+ ++E L A + EG++I+L+ QP SPDLN++D+ FFR+++ +++ VE +VK +K+ YE YD ++ W L V ++L Sbjct: 329 FDGKLGIFPFTEEVPAKRSSKNRERGTIEIKAITSVTKEVIRRKIIDELLPAIRSKWPWFASKDILIQQDNSRPHINPNDAEFLDAATQ-EGFNIQLICQPPQSPDLNVLDLGFFRAIQSLQHQKFPRDVEALVKAVKEAYEAYDPKLINYTWLQLQYVMLEIL 491
BLAST of mRNA_C-tenellus_contig10152.1.1 vs. uniprot
Match: A0A024UI08_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UI08_9STRA) HSP 1 Score: 112 bits (281), Expect = 6.620e-27 Identity = 53/165 (32.12%), Postives = 96/165 (58.18%), Query Frame = 1 Query: 28 SFDGKLGVWRVCAPKTADRTSKNHEKGNVYEQDCTLDHVWYSKSYTEELLPAIKTKMPWLQGKQVVIQQDGATPHMGKGNSEILSGAGKTEGWSIRLVTQPSNSPDLNIVDMCFFRSLKCRVMREWFGSVEEMVKVIKKQYEEYDETILERAWQLLFVVYNQVLR 522 S+DGK+G W + A R SKN ++G+ + + Y ++++PAIK++ P + K + +QQD A PH+ ++ +L+ AG+++GW IRL QPS SPD+N++D+ F +++ ++EE+V + K Y++ D +L++ + L V VL+ Sbjct: 91 SWDGKIGTWPFTMVRPALRNSKNFKRGDAITEPVVVTKEVYRSFLVDKVIPAIKSRWPGRRSKTIWVQQDSARPHVAVDDAPVLA-AGQSDGWDIRLCAQPSQSPDMNVLDLGLFNAIQSLQHHTASYTIEELVLAVSKAYDDLDPLVLDKTFMTLQKVMECVLK 254
BLAST of mRNA_C-tenellus_contig10152.1.1 vs. uniprot
Match: UPI000B778AD2 (uncharacterized protein LOC110722901 n=1 Tax=Chenopodium quinoa TaxID=63459 RepID=UPI000B778AD2) HSP 1 Score: 108 bits (270), Expect = 4.960e-26 Identity = 64/181 (35.36%), Postives = 100/181 (55.25%), Query Frame = 1 Query: 1 TNARPDSAHS----FDGKLGVWRVCAPKTADRTSKNHEKGNVY---EQDCTLDHVWYSKSYTEELLPAIKTKMPWLQGKQVVIQQDGATPHMGKGNSEILSGAGKTEGWSIRLVTQPSNSPDLNIVDMCFFRSLKCRVMREWFGSVEEMVKVIKKQYEEYDETILERAWQLLFVVYNQVLR 522 T+ARP A + +DGK G++ A R+SKN EKG + +Q T D + K EE++PAI+ P K + IQQD A PH+ + E L A K +G+ + L+ QP+ SPDLN++D+ FFR+++ +E+ SVEE+V+ + Y YD I+ W V ++++ Sbjct: 3 TSARPHIASNGYINWDGKTGMFPFTEQVPAQRSSKNREKGTIETKAKQTITRDII--KKMILEEVMPAIRATWPENSCKTIWIQQDNARPHINIDDPEFLEEANK-DGFDMHLICQPAQSPDLNVLDLGFFRAIQAIQHQEFPESVEELVESVLTSYASYDPRIINMTWLHSMYVMEEIMK 180
BLAST of mRNA_C-tenellus_contig10152.1.1 vs. uniprot
Match: UPI001D0245D6 (uncharacterized protein LOC123072166 n=1 Tax=Triticum aestivum TaxID=4565 RepID=UPI001D0245D6) HSP 1 Score: 107 bits (267), Expect = 3.410e-24 Identity = 57/166 (34.34%), Postives = 93/166 (56.02%), Query Frame = 1 Query: 28 SFDGKLGVWRVCAPKTADRTSKNHEKGNVYEQDCTLDHVWYSKSYTEELLPAIKTKMPWLQGKQVV-IQQDGATPHMGKGNSEILSGAGKTEGWSIRLVTQPSNSPDLNIVDMCFFRSLKCRVMREWFGSVEEMVKVIKKQYEEYDETILERAWQLLFVVYNQVLR 522 +FDGK+G+W A R S+N E+G + + + E+L+PAI P ++ + IQQD ATPH+ K + E+ A + G I+L+ QP NSPDLNI+D+CFFRSL+ S+ E+++ ++++Y+ YD L R++ L +++R Sbjct: 137 TFDGKIGIWAFVTESPAQRRSENRERGTLELKSLKVTRDVMRLYMCEKLIPAIHDLWPDEDEERTIFIQQDNATPHL-KPSDEVFRRAVEQTGLDIKLIQQPPNSPDLNILDLCFFRSLQSHTDCRAPQSIRELIEGVEEEYQNYDVNTLARSFVTLQSCMREIMR 301
BLAST of mRNA_C-tenellus_contig10152.1.1 vs. uniprot
Match: UPI001D0257F7 (uncharacterized protein LOC123043747 n=2 Tax=Triticum aestivum TaxID=4565 RepID=UPI001D0257F7) HSP 1 Score: 107 bits (267), Expect = 7.900e-24 Identity = 57/166 (34.34%), Postives = 93/166 (56.02%), Query Frame = 1 Query: 28 SFDGKLGVWRVCAPKTADRTSKNHEKGNVYEQDCTLDHVWYSKSYTEELLPAIKTKMPWLQGKQVV-IQQDGATPHMGKGNSEILSGAGKTEGWSIRLVTQPSNSPDLNIVDMCFFRSLKCRVMREWFGSVEEMVKVIKKQYEEYDETILERAWQLLFVVYNQVLR 522 +FDGK+G+W A R S+N E+G + + + E+L+PAI P ++ + IQQD ATPH+ K + E+ A + G I+L+ QP NSPDLNI+D+CFFRSL+ S+ E+++ ++++Y+ YD L R++ L +++R Sbjct: 406 TFDGKIGIWAFVTESPAQRRSENRERGTLELKSLKVTRDVMRLYMCEKLIPAIHDLWPDEDEERTIFIQQDNATPHL-KPSDEVFRRAVEQTGLDIKLIQQPPNSPDLNILDLCFFRSLQSHTDCRAPQSIRELIEGVEEEYQNYDVNTLARSFVTLQSCMREIMR 570
BLAST of mRNA_C-tenellus_contig10152.1.1 vs. uniprot
Match: A0A6A4Z322_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z322_9STRA) HSP 1 Score: 105 bits (262), Expect = 2.220e-23 Identity = 60/175 (34.29%), Postives = 94/175 (53.71%), Query Frame = 1 Query: 7 ARP--DSAHS--FDGKLGVWRVCAPKTADRTSKNHEKGNVYEQDCTLDHVWYSKSYTEELLPAIKTKMPWLQGKQVVIQQDGATPHMGKGNSEILSGAGKTEGWSIRLVTQPSNSPDLNIVDMCFFRSLKCRVMREWFGSVEEMVKVIKKQYEEYDETILERAWQLLFVVYNQVL 519 ARP D A S +DGK+G W A R+S+N G + + + Y K + ++PAIK K P + VVIQQD A PH+ ++ ++S A ++GWS+ L QP NSPDLN++D+ FFR+++ + +E+V K +++ D LER + L +V+ Sbjct: 228 ARPRWDDAKSECWDGKIGTWHFTETVPAARSSRNRPAGTLELRPINVTRPIYKKMLIDNVIPAIKAKWPAESSRSVVIQQDNARPHVAPWDAAVVS-ACTSDGWSMSLKCQPPNSPDLNVLDLGFFRAIQSLQQTHHSNTYQEIVDATNKAWDDVDPWSLERNFLTLQCCLREVI 401
BLAST of mRNA_C-tenellus_contig10152.1.1 vs. uniprot
Match: A0A6A4YXI9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4YXI9_9STRA) HSP 1 Score: 104 bits (259), Expect = 6.150e-23 Identity = 52/145 (35.86%), Postives = 85/145 (58.62%), Query Frame = 1 Query: 7 ARP----DSAHSFDGKLGVWRVCAPKTADRTSKNHEKGNVYEQDCTLDHVWYSKSYTEELLPAIKTKMPWLQGKQVVIQQDGATPHMGKGNSEILSGAGKTEGWSIRLVTQPSNSPDLNIVDMCFFRSLKCRVMREWFGSVEEMV 429 ARP D+ FDGK+G W A RTS+N G + Q ++ Y ++++P IK+K P G+ V+IQQD A PH+ +S I+ A K+ GW++++V QP NSPDLNI+D+ FFR+++ + ++++++ Sbjct: 224 ARPRLNDDTGEWFDGKIGTWHFTEKVAAARTSRNRPAGTLETQPVSVTRPVYKAMLIDKVIPTIKSKWPSSAGRNVIIQQDNARPHVPPSDSAIVD-ACKSGGWNMKVVYQPPNSPDLNILDLGFFRAIQSLQEKNHSRNIDDII 367
BLAST of mRNA_C-tenellus_contig10152.1.1 vs. uniprot
Match: A0A090N4N9_OSTTA (Uncharacterized protein n=1 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A090N4N9_OSTTA) HSP 1 Score: 101 bits (251), Expect = 6.190e-23 Identity = 66/185 (35.68%), Postives = 98/185 (52.97%), Query Frame = 1 Query: 7 ARPDSAHSFDGKLGVWRVCAPKTADRTSKNHEKGNVYEQDCTLDHVWYSKSYTEELLPAIKTKMPWLQGKQVVIQQDGATPHMGKGNSEILSGAGKT-------EGWSIRLVTQPSNSPDLNIVDMCFFRSLKC------RVMREWFGSVEEMVKVIKKQYEEY-DETILERAWQLLFVVYNQVL 519 ARP FDG++G++R K A R SK HE+G+V ++DC ++ + + TE+L+P I TKM V +Q DGA PH+ + L+ AGK + I+ V QP+NSPD N+ D+CFFRSL R + + +E ++ +QY EY D L+R W + V +L Sbjct: 37 ARP--CGDFDGRIGMYRCAREKVAQRRSKFHERGDVCDEDCDVEAHMFHELVTEKLIPDIYTKMADFD--IVFVQMDGARPHVKC--MDALNAAGKERKRIDGKQAPMIKFVLQPANSPDTNLNDLCFFRSLSKFVQEHEREIEHSAANKDEFWNLMVEQYHEYHDRERLQRCWVVKTAVTKCIL 215
BLAST of mRNA_C-tenellus_contig10152.1.1 vs. uniprot
Match: UPI00090141F9 (uncharacterized protein LOC109166493 n=1 Tax=Ipomoea nil TaxID=35883 RepID=UPI00090141F9) HSP 1 Score: 99.4 bits (246), Expect = 9.330e-23 Identity = 56/165 (33.94%), Postives = 91/165 (55.15%), Query Frame = 1 Query: 31 FDGKLGVWRVCAPKTADRTSKNHEKGNVYEQDC-TLDHVWYSKSYTEELLPAIKTKMPWLQGKQVVIQQDGATPHMGKGNSEILSGAGKTEGWSIRLVTQPSNSPDLNIVDMCFFRSLKCRVMREWFGSVEEMVKVIKKQYEEYDETILERAWQLLFVVYNQVLR 522 FDGK+G++ + A R SKN E G + + T++ K + +LPAI+ K P K + IQQD A PH+ ++E L A K +G+ I L QP NSPD+N++D+ FFR+L+ ++E +V+E+V K ++E L + L + +V++ Sbjct: 2 FDGKIGIFSFVYKEAAKRRSKNREAGTLETKPIETVNKEVTKKWLIDYVLPAIRAKWPPSSSKTIFIQQDNAKPHISMNDAEFLEAA-KKDGFDIHLTCQPPNSPDMNVLDLGFFRALQYLQLQEVPRNVDELVAATHKAFDEISIESLSNVFLTLQLYMVEVMK 165 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10152.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10152.1.1 >prot_C-tenellus_contig10152.1.1 ID=prot_C-tenellus_contig10152.1.1|Name=mRNA_C-tenellus_contig10152.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=175bp TNARPDSAHSFDGKLGVWRVCAPKTADRTSKNHEKGNVYEQDCTLDHVWYback to top mRNA from alignment at C-tenellus_contig10152:3634..4158- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10152.1.1 ID=mRNA_C-tenellus_contig10152.1.1|Name=mRNA_C-tenellus_contig10152.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=525bp|location=Sequence derived from alignment at C-tenellus_contig10152:3634..4158- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10152:3634..4158- >mRNA_C-tenellus_contig10152.1.1 ID=mRNA_C-tenellus_contig10152.1.1|Name=mRNA_C-tenellus_contig10152.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=525bp|location=Sequence derived from alignment at C-tenellus_contig10152:3634..4158- (Choristocarpus tenellus KU2346)back to top |