mRNA_C-tenellus_contig1013.1.4 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig1013.1.4
Unique NamemRNA_C-tenellus_contig1013.1.4
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig1013.1.4 vs. uniprot
Match: D7G632_ECTSI (Cyclin B1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G632_ECTSI)

HSP 1 Score: 483 bits (1244), Expect = 1.610e-161
Identity = 229/289 (79.24%), Postives = 261/289 (90.31%), Query Frame = 3
Query:  324 RHSRCKMPQAQLSEHDVEDRDSPDACAEYVIDMYKHFKELEEKHTPTVYMHTQTDINCKMRAILIDWIVEVHLKFKLADPTLYLTCHIIDRFCMLENVHRSKLQLVGVTALLVACKYEEIYPTEVRDCVYITDHAYSREEVLEMEQKILRRLKFEISVPTAWTFLIRFNKVARATDRQHNRSQYYLERCLQEHDSLSFRPSLLAAAAVFLSRIPDMDVASAWDDTMVKFCNIPRESLDSCARMIIKFLLDEPVTASRRHLVAVKRKFVAERFLAVGIDKLPKMPPKPQI 1190
            R  RCK+P +++SEHDV DRD P ACAEY +DMYK +KELEEK+TPTVYMHTQ DINCKMRAILIDWIVEVHLKFKLADPTLYLTCHIIDRFCM ENVHRSKLQLVGVTALL+ACKYEEI+PTEVRDCVYITDHAY+REEVLEMEQ ILRRLKFE++VPT WTFL+RF K+A+ATDRQH+R+QYYLERCLQEH++LSFRPS+LAAA+VFL+RIPD  + +AW D + KFCN PRE L+ CAR++IKFLLDEPVTAS+RHLVAVK+KF+ ERFLAV ID LP +P KP I
Sbjct:  199 RLKRCKVPPSEVSEHDVVDRDDPIACAEYAMDMYKRYKELEEKYTPTVYMHTQVDINCKMRAILIDWIVEVHLKFKLADPTLYLTCHIIDRFCMQENVHRSKLQLVGVTALLIACKYEEIFPTEVRDCVYITDHAYTREEVLEMEQTILRRLKFELTVPTQWTFLVRFLKIAKATDRQHHRAQYYLERCLQEHEALSFRPSMLAAASVFLARIPDSGIKNAWPDALAKFCNTPREGLECCARLMIKFLLDEPVTASQRHLVAVKKKFLGERFLAVAIDDLPTLPRKPNI 487          
BLAST of mRNA_C-tenellus_contig1013.1.4 vs. uniprot
Match: A0A836CA68_9STRA (Cyclin, N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA68_9STRA)

HSP 1 Score: 328 bits (841), Expect = 1.830e-104
Identity = 159/255 (62.35%), Postives = 201/255 (78.82%), Query Frame = 3
Query:  420 MYKHFKELEEKHTPTVYMHTQTDINCKMRAILIDWIVEVHLKFKLADPTLYLTCHIIDRFCMLENVHRSKLQLVGVTALLVACKYEEIYPTEVRDCVYITDHAYSREEVLEMEQKILRRLKFEISVPTAWTFLIRFNKVARATDRQHNRSQYYLERCLQEHDSLSFRPSLLAAAAVFLSRIPDMDVASAWDDTMVKFCNIPRESLDSCARMIIKFLLDEPVTASRRHLVAVKRKFVAERFLAVGIDKLPKMPPKP 1184
            MY  + +LE  + PTVYMH Q DIN KMR+ILIDWIVEVH KFKLA PTLYLTC+IIDR+CM+E V R KLQLVGVTALLVACKYEEI+P EVRDCVYITD+ Y+RE++LEME  ++RRL+++++VPTAWTFL R  +VARAT+ Q  R+ YY ER LQEHD L+FRPSL+AA A +LSR+ D++ A AW   + +FC +  + L  CA M+  FL  EPVTA+ RHLVA KRKF+ ++FL+V I++LP++P  P
Sbjct:    1 MYSRYVDLEAMYAPTVYMHMQEDINEKMRSILIDWIVEVHFKFKLATPTLYLTCNIIDRYCMVEAVTRDKLQLVGVTALLVACKYEEIWPPEVRDCVYITDNTYTREQMLEMEMAMVRRLRYQLTVPTAWTFLARVLRVARATETQFQRACYYSERMLQEHDMLAFRPSLVAATATYLSRLVDIEDAHAWPPVLEEFCGLSVDMLMPCAHMMRSFLEAEPVTANHRHLVAAKRKFLQDKFLSVSIEELPQLPSPP 255          
BLAST of mRNA_C-tenellus_contig1013.1.4 vs. uniprot
Match: A0A7S2GN01_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GN01_9STRA)

HSP 1 Score: 273 bits (699), Expect = 5.690e-81
Identity = 141/271 (52.03%), Postives = 186/271 (68.63%), Query Frame = 3
Query:  369 DVEDRDSPDACAEYVIDMYKHFKELEEKHTPTVYMHTQTDINCKMRAILIDWIVEVHLKFKLADPTLYLTCHIIDRFCMLENVHRSKLQLVGVTALLVACKYEEIYPTEVRDCVYITDHAYSREEVLEMEQKILRRLKFEISVPTAWTFLIRFNKVARATDRQHN--RSQYYLERCLQEHDSLSFRPSLLAAAAVFL---SRIPDMDVASAWDDTMVKFCNIPRESLDSCARMIIKFLLDEPVTASRRHLVAVKRKFVAERFLAVGIDKLP 1166
            D  DRD+P A  EY+ ++Y ++K+ E+   P +YMH Q+DI  +MR+ILIDW+VEVHLKFKL   TLYL  H+ID+FC   +V R +LQLVG+TALL+ACKYEEIYP EVRDCVYITDHAY+REEVL ME ++L+  ++ I+VPT + FLIR+ KV   T ++    R+ YY ER LQEHD L ++PSL+AAA+V+L   S  PD      W   + K+     E +  CAR I  ++ + PVT SRR L AVK+KF  ++FL V  D  P
Sbjct:  173 DEADRDNPLAVVEYIEELYHYYKKAEQIKAPAMYMHRQSDITPRMRSILIDWLVEVHLKFKLVPATLYLCVHLIDQFCSSNDVLRGRLQLVGITALLIACKYEEIYPPEVRDCVYITDHAYTREEVLSMETEMLQHFEYNITVPTGYQFLIRYLKVMGCTPKEAASFRASYYAERSLQEHDMLLYKPSLVAAASVYLALKSERPD-----PWGRVIEKYSGYSLEQITPCARQICHYIRENPVTPSRRPLTAVKKKFETQKFLRVAEDPDP 438          
BLAST of mRNA_C-tenellus_contig1013.1.4 vs. uniprot
Match: A0A7R9W0K7_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W0K7_9STRA)

HSP 1 Score: 270 bits (689), Expect = 9.580e-80
Identity = 137/272 (50.37%), Postives = 191/272 (70.22%), Query Frame = 3
Query:  357 LSEHDVEDRDSPDACAEYVIDMYKHFKELEEKHTPTVYMHTQTDINCKMRAILIDWIVEVHLKFKLADPTLYLTCHIIDRFCMLENVHRSKLQLVGVTALLVACKYEEIYPTEVRDCVYITDHAYSREEVLEMEQKILRRLKFEISVPTAWTFLIRFNKVARATDRQHNRSQYYLERCLQEHDSLSFRPSLLAAAAVFLSRIPDMDVASAWD-----DTMVKFCNIPRESLDSCARMIIKFLLDEPVTASRRHLVAVKRKFVAERFLAVGID 1157
            ++ HD +D+D+    A YV D+++HF   E + +P +YM  Q DIN KMRAIL+DW+VEVH+KF+L   TLYL  ++IDR+C L  V RSKLQLVGVTALL+ACKYEEIYP EVRDCVYITD AY+R+EVL+MEQ +L+RL+F+I+VPTA+ FL RF  +A+++      + YY ER LQEHD L F+PS++A +AV L+ + + D+    D       +V++    R  + +CA +I   + +EP+TASRR LVAVKRK+   ++  V + 
Sbjct:  134 MAPHDADDKDNILQVAPYVTDIFQHFYRAEARSSPEMYMDHQADINAKMRAILVDWLVEVHMKFRLVPDTLYLCINLIDRYCSLVTVARSKLQLVGVTALLIACKYEEIYPPEVRDCVYITDRAYNRQEVLDMEQDMLQRLRFKITVPTAYPFLQRFLNMAKSSQLARIAANYYTERTLQEHDLLRFKPSVVAVSAVILA-LNNPDICEDGDCPGMPKILVEYTGFERSEIIACASLIATKVGEEPITASRRQLVAVKRKYDHRKYQHVSVS 404          
BLAST of mRNA_C-tenellus_contig1013.1.4 vs. uniprot
Match: A0A6U6KAA6_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6KAA6_9STRA)

HSP 1 Score: 269 bits (687), Expect = 2.730e-78
Identity = 139/270 (51.48%), Postives = 190/270 (70.37%), Query Frame = 3
Query:  357 LSEHDVEDRDSPDACAEYVIDMYKHFKELEEKHTPTVYMHTQTDINCKMRAILIDWIVEVHLKFKLADPTLYLTCHIIDRFCMLENVHRSKLQLVGVTALLVACKYEEIYPTEVRDCVYITDHAYSREEVLEMEQKILRRLKFEISVPTAWTFLIRFNKVARATDRQHNRSQYYLERCLQEHDSLSFRPSLLAAAAVFLSRIPDMDVASAWD-----DTMVKFCNIPRESLDSCARMIIKFLLDEPVTASRRHLVAVKRKFVAERFLAVG 1151
            ++ HD  DR +    A YV D+++HF + E K  P +YM  Q DIN KMRAIL+DW+VEVH+KF+L   TLYL  ++IDR+C   +V RSKLQLVGVTALL+ACKYEEIYP EVRDCVYITD AY+R+EVL+MEQ IL+RL+F+I+VPTA+ FL+RF  + +A+      + YY+ER LQEHD L F+PS++AA+AV L+ + + D++   D       ++++       L +CA +I   + +EPVTASRR LVAVKRK+   ++  V 
Sbjct:  229 IAPHDTNDRGNTLQVAPYVTDIFQHFFQAEAKSCPEMYMDQQADINAKMRAILVDWLVEVHMKFRLVPDTLYLCINLIDRYCSHVSVARSKLQLVGVTALLIACKYEEIYPPEVRDCVYITDRAYNRQEVLDMEQDILQRLRFKITVPTAYPFLLRFLNMTKASQLSRIAANYYMERTLQEHDLLKFKPSVVAASAVVLA-LNNPDISDDHDCPGMPTVLMEYTGFQPSELMACAAIIATKVGEEPVTASRRQLVAVKRKYDHRKYQHVS 497          
BLAST of mRNA_C-tenellus_contig1013.1.4 vs. uniprot
Match: A0A7S2XS29_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XS29_9STRA)

HSP 1 Score: 266 bits (679), Expect = 1.410e-77
Identity = 139/278 (50.00%), Postives = 190/278 (68.35%), Query Frame = 3
Query:  351 AQLSEHDVEDRDSPDACAEYVIDMYKHFKELEEKHTPTVYMHTQTDINCKMRAILIDWIVEVHLKFKLADPTLYLTCHIIDRFCMLENVHRSKLQLVGVTALLVACKYEEIYPTEVRDCVYITDHAYSREEVLEMEQKILRRLKFEISVPTAWTFLIRFNKVARATDRQHNRSQYYLERCLQEHDSLSFRPSLLAAAAVFLS-RIPDMDVASA--------WDDTMVKFCNIPRESLDSCARMIIKFLLDEPVTASRRHLVAVKRKFVAERFLAVGID 1157
            ++++ HD+ ++D      EYV D++++   +E K  P  YM  Q DIN KMRAIL+DW+VEVH+KF+L   TLYL  +IIDR+C L N+ RSKLQLVGVTALL+ACKYEEIYP EVRDCVYITD AY R+EVL+MEQ IL RL+F+I+VPT + FL RF  + +A+      +QYY ER LQE+D L FRPSL+ AAAV L+   P + +            D+ ++++       +  CA +I + + +EPVTASRR LVAVKRK+  ++++ V I+
Sbjct:  187 SEIAPHDIHNKDDVLEVTEYVTDIFQYLYHVEAKSWPRGYMEKQQDINAKMRAILVDWLVEVHMKFRLNPETLYLCINIIDRYCNLVNIARSKLQLVGVTALLIACKYEEIYPPEVRDCVYITDRAYQRQEVLDMEQDILNRLRFKITVPTPYPFLQRFLTLTKASQLTRFAAQYYTERTLQEYDVLKFRPSLVCAAAVILALNNPAIAIKEGIRNYECPGLDNILLEYTGFAEADILECAAVIARKVGEEPVTASRRQLVAVKRKYDNKKYMNVSIE 464          
BLAST of mRNA_C-tenellus_contig1013.1.4 vs. uniprot
Match: A0A6V2B684_9STRA (Hypothetical protein n=4 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2B684_9STRA)

HSP 1 Score: 260 bits (665), Expect = 7.640e-75
Identity = 134/274 (48.91%), Postives = 186/274 (67.88%), Query Frame = 3
Query:  357 LSEHDVEDRDSPDACAEYVIDMYKHFKELEEKHTPTVYMHTQTDINCKMRAILIDWIVEVHLKFKLADPTLYLTCHIIDRFCMLENVHRSKLQLVGVTALLVACKYEEIYPTEVRDCVYITDHAYSREEVLEMEQKILRRLKFEISVPTAWTFLIRFNKVARATDRQHNRSQYYLERCLQEHDSLSFRPSLLAAAAVFLS-RIPDMDVASAWDDT--------MVKFCNIPRESLDSCARMIIKFLLDEPVTASRRHLVAVKRKFVAERFLAVG 1151
            +++HD +D D P   ++YV D+++H    E +  P +YM  Q DIN KMRAIL+DW+VEVH+KF+L   TLYL  +IIDR+C    V RSKLQLVGVTALL+ACKYEEIYP EVRDCVYITD AY ++EVL+MEQ +L RL+F+I+VPTA+ F++RF  + +A+      + YY+ER LQEHD L  RPSL+ AA+V L+   PD+    +  +         ++++    +  +  CA +I + + +EPVTASRR LVAVKRK+   ++  V 
Sbjct:  246 IAKHDEDDADEPLLVSDYVTDIFQHLFNAETRSRPRMYMDKQRDINAKMRAILVDWLVEVHMKFRLVPETLYLCVNIIDRYCNQVPVARSKLQLVGVTALLIACKYEEIYPPEVRDCVYITDRAYHKQEVLDMEQDMLHRLRFKITVPTAYPFILRFLNITKASSVARYAAHYYMERTLQEHDLLLHRPSLVCAASVVLALNNPDIIAKESTSNRERPGVPKILLEYTGFSKSDILECAAVIARKVGEEPVTASRRQLVAVKRKYDNRKYFHVS 519          
BLAST of mRNA_C-tenellus_contig1013.1.4 vs. uniprot
Match: A0A7S1ZPT4_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZPT4_TRICV)

HSP 1 Score: 258 bits (658), Expect = 1.690e-74
Identity = 133/272 (48.90%), Postives = 187/272 (68.75%), Query Frame = 3
Query:  357 LSEHDVEDRDSPDACAEYVIDMYKHFKELEEKHTPTVYMHTQTDINCKMRAILIDWIVEVHLKFKLADPTLYLTCHIIDRFCMLENVHRSKLQLVGVTALLVACKYEEIYPTEVRDCVYITDHAYSREEVLEMEQKILRRLKFEISVPTAWTFLIRFNKVARATDRQHNRSQYYLERCLQEHDSLSFRPSLLAAAAVFLSRIPDMDVASAWDDT-------MVKFCNIPRESLDSCARMIIKFLLDEPVTASRRHLVAVKRKFVAERFLAVG 1151
            ++ HD  D+++      YV D+++H    E +  P +YMH Q DIN KMRAIL+DW+VEVH+KF L   TLYL  +IIDR+C   +V RSKLQLVGVTALL+ACKYEEIYP EVRDCVYITD AY+R+EVL+MEQ +L+RL+F+I+VPTA+ FL RF  + +A       + YY+ER LQEHD L ++PS++AA+ V L+ + + D+ +  +         ++++     + L SCA++I   + ++PVTAS+R LVAVKRK+   +F  V 
Sbjct:  188 IAPHDACDKENVLKVVPYVTDIFQHLYRAEARSCPEIYMHNQADINAKMRAILVDWLVEVHMKFHLVPETLYLCINIIDRYCSQVSVARSKLQLVGVTALLIACKYEEIYPPEVRDCVYITDRAYNRQEVLDMEQDMLQRLRFKITVPTAYPFLQRFLSLTKAPQLAQFAANYYMERTLQEHDLLQYKPSVVAASCVILA-LSNPDIPADTETLNPGMPRILLEYTGFEEKVLLSCAKLIATKVGEDPVTASKRQLVAVKRKYGHGKFRHVS 458          
BLAST of mRNA_C-tenellus_contig1013.1.4 vs. uniprot
Match: A0A6U6K965_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6K965_9STRA)

HSP 1 Score: 248 bits (632), Expect = 2.620e-73
Identity = 128/241 (53.11%), Postives = 173/241 (71.78%), Query Frame = 3
Query:  444 EEKHTPTVYMHTQTDINCKMRAILIDWIVEVHLKFKLADPTLYLTCHIIDRFCMLENVHRSKLQLVGVTALLVACKYEEIYPTEVRDCVYITDHAYSREEVLEMEQKILRRLKFEISVPTAWTFLIRFNKVARATDRQHNRSQYYLERCLQEHDSLSFRPSLLAAAAVFLSRIPDMDVASAWD-----DTMVKFCNIPRESLDSCARMIIKFLLDEPVTASRRHLVAVKRKFVAERFLAVG 1151
            + K  P +YM  Q DIN KMRAIL+DW+VEVH+KF+L   TLYL  ++IDR+C   +V RSKLQLVGVTALL+ACKYEEIYP EVRDCVYITD AY+R+EVL+MEQ IL+RL+F+I+VPTA+ FL+RF  + +A+      + YY+ER LQEHD L F+PS++AA+AV L+ + + D++   D       ++++       L +CA +I   + +EPVTASRR LVAVKRK+   ++  V 
Sbjct:   17 QAKSCPEMYMDQQADINAKMRAILVDWLVEVHMKFRLVPDTLYLCINLIDRYCSHVSVARSKLQLVGVTALLIACKYEEIYPPEVRDCVYITDRAYNRQEVLDMEQDILQRLRFKITVPTAYPFLLRFLNMTKASQLSRIAANYYMERTLQEHDLLKFKPSVVAASAVVLA-LNNPDISDDHDCPGMPTVLMEYTGFQPSELMACAAIIATKVGEEPVTASRRQLVAVKRKYDHRKYQHVS 256          
BLAST of mRNA_C-tenellus_contig1013.1.4 vs. uniprot
Match: A0A7S2PQG9_9STRA (G2/mitotic-specific cyclin-B3 n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PQG9_9STRA)

HSP 1 Score: 248 bits (633), Expect = 9.890e-71
Identity = 131/276 (47.46%), Postives = 184/276 (66.67%), Query Frame = 3
Query:  357 LSEHDVEDRDSPDACAEYVIDMYKHFKELEEKHTPTVYMHTQTDINCKMRAILIDWIVEVHLKFKLADPTLYLTCHIIDRFCMLENVHRSKLQLVGVTALLVACKYEEIYPTEVRDCVYITDHAYSREEVLEMEQKILRRLKFEISVPTAWTFLIRFNKVARATDRQHNRSQYYLERCLQEHDSLSFRPSLLAAAAVFLS-RIPDMDVAS--------AWDDTMVKFCNIPRESLDSCARMIIKFLLDEPVTASRRHLVAVKRKFVAERFLAVGID 1157
            ++ +D   R  P   AEY+ D+++H  + E ++    YM  Q DIN +MRAILIDW+VEVH+KF+L   TLYL   IIDR+C   +V RSKLQL+GVTALLVACK+EEIYP EVRDCVYITD AY+R+EVL+MEQ+IL+ L ++ISVPTA+ FL RF  ++ A++   + + YYLER LQEH  L FRPS++ A+AV L+   PD+ V           +   ++++       L +C   + + + +EP+TASRR L AVK+K+   ++L V  +
Sbjct:  205 IAHYDAARRSDPQKVAEYITDLFQHLYKAETRYKVAPYMFRQEDINARMRAILIDWLVEVHMKFRLVPETLYLCVSIIDRYCCKVDVLRSKLQLIGVTALLVACKHEEIYPPEVRDCVYITDRAYNRQEVLDMEQEILKVLDWKISVPTAFPFLDRFLCLSDASEMTKHAAAYYLERTLQEHSFLQFRPSVVCASAVILALNNPDIRVQEEDLDRELPGFPKILMEYTGFSEFELTTCMERMAEKVGEEPITASRRQLNAVKKKYENSKYLEVSTN 480          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig1013.1.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G632_ECTSI1.610e-16179.24Cyclin B1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6... [more]
A0A836CA68_9STRA1.830e-10462.35Cyclin, N-terminal domain-containing protein n=1 T... [more]
A0A7S2GN01_9STRA5.690e-8152.03Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7R9W0K7_9STRA9.580e-8050.37Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A6U6KAA6_9STRA2.730e-7851.48Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A7S2XS29_9STRA1.410e-7750.00Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A6V2B684_9STRA7.640e-7548.91Hypothetical protein n=4 Tax=Ditylum brightwellii ... [more]
A0A7S1ZPT4_TRICV1.690e-7448.90Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A6U6K965_9STRA2.620e-7353.11Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S2PQG9_9STRA9.890e-7147.46G2/mitotic-specific cyclin-B3 n=1 Tax=Skeletonema ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig1013contigC-tenellus_contig1013:2..3659 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G632
PFAMsCyclin_C,Cyclin_N
Model size2114
Max annot lvl2759|Eukaryota
KEGG koko:K21770,ko:K21777
KEGG TC1.I.1.1.3
KEGG Pathwayko04068,ko04110,ko04114,ko04115,ko04218,ko04914,ko05166,map04068,map04110,map04114,map04115,map04218,map04914,map05166
Hectar predicted targeting categoryother localisation
Exons4
Evalue3.1e-167
EggNOG OGsCOG5024@1|root,KOG0653@2759|Eukaryota
Ec32 ortholog descriptionCyclin B1
Ec32 orthologEc-11_004920.1
Descriptioncell division
Cds size1167
COG categoryD
BRITEko00000,ko00001,ko03032,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig1013.1.4prot_C-tenellus_contig1013.1.4Choristocarpus tenellus KU2346polypeptideC-tenellus_contig1013 917..3627 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789116.612278-UTR-C-tenellus_contig1013:1..9161680789116.612278-UTR-C-tenellus_contig1013:1..916Choristocarpus tenellus KU2346UTRC-tenellus_contig1013 2..916 -
1680789116.7114477-UTR-C-tenellus_contig1013:3627..36591680789116.7114477-UTR-C-tenellus_contig1013:3627..3659Choristocarpus tenellus KU2346UTRC-tenellus_contig1013 3628..3659 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789116.6531749-CDS-C-tenellus_contig1013:916..11261680789116.6531749-CDS-C-tenellus_contig1013:916..1126Choristocarpus tenellus KU2346CDSC-tenellus_contig1013 917..1126 -
1680789116.663793-CDS-C-tenellus_contig1013:1419..19621680789116.663793-CDS-C-tenellus_contig1013:1419..1962Choristocarpus tenellus KU2346CDSC-tenellus_contig1013 1420..1962 -
1680789116.6832914-CDS-C-tenellus_contig1013:3066..33691680789116.6832914-CDS-C-tenellus_contig1013:3066..3369Choristocarpus tenellus KU2346CDSC-tenellus_contig1013 3067..3369 -
1680789116.698369-CDS-C-tenellus_contig1013:3516..36271680789116.698369-CDS-C-tenellus_contig1013:3516..3627Choristocarpus tenellus KU2346CDSC-tenellus_contig1013 3517..3627 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig1013.1.4

>prot_C-tenellus_contig1013.1.4 ID=prot_C-tenellus_contig1013.1.4|Name=mRNA_C-tenellus_contig1013.1.4|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=389bp
MNGQGGMHRMQLRKRSALGDISNAARHEAGGPVGNKGRRRKAPGFSVYED
ASCAHSNGGAPSGPHEAPTETSKEEECALRKKVNQETSRKLTRETLERHS
RCKMPQAQLSEHDVEDRDSPDACAEYVIDMYKHFKELEEKHTPTVYMHTQ
TDINCKMRAILIDWIVEVHLKFKLADPTLYLTCHIIDRFCMLENVHRSKL
QLVGVTALLVACKYEEIYPTEVRDCVYITDHAYSREEVLEMEQKILRRLK
FEISVPTAWTFLIRFNKVARATDRQHNRSQYYLERCLQEHDSLSFRPSLL
AAAAVFLSRIPDMDVASAWDDTMVKFCNIPRESLDSCARMIIKFLLDEPV
TASRRHLVAVKRKFVAERFLAVGIDKLPKMPPKPQIVI*
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mRNA from alignment at C-tenellus_contig1013:2..3659-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig1013.1.4 ID=mRNA_C-tenellus_contig1013.1.4|Name=mRNA_C-tenellus_contig1013.1.4|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3658bp|location=Sequence derived from alignment at C-tenellus_contig1013:2..3659- (Choristocarpus tenellus KU2346)
GTTCAGCCTCAGAGGCTGGAGTTGGGGAATGCATGAATGGTCAAGGGGGG ATGCACAGGATGCAGCTACGGAAACGAAGCGCGCTTGGGGATATTAGCAA CGCCGCACGTCATGAAGCGGGCGGACCTGTAGGGAATAAAGGAGTAAGTT ACATATGCACCCACTAATACAATGTGCGCATGGGGTCTCTTTCTAAGGCT GATGGCAACATGGAAGACTGTTAATCGTATTCCATACTCTTACTCTTCCT TTCCCCCACTCTTACGACTACTCTGACCTGCCCCAACCAGAGGAGGCGAA AAGCGCCAGGATTCAGTGTGTACGAGGATGCAAGTTGTGCTCACTCTAAC GGTGGTGCTCCTAGCGGTCCTCATGAAGCTCCCACTGAAACAAGCAAGGA GGAAGAATGCGCGTTACGAAAAAAGGTCAACCAAGAGACCAGTCGCAAGC TGACTCGAGAAACATTGGAGCGACACAGCCGATGCAAGATGCCTCAGGCT CAGCTTAGCGAGCACGATGTCGAGGACAGGGATAGCCCCGATGCCTGCGC GGAGTATGTGATAGATATGTACAAGCACTTCAAGGAACTGGAGGTAATCT GAACCGAATCGTGTAGAGTAGCAGATGACATTTTTGAAGGGAGAGGCAGG CATTCAAATCTAGGATATATTCTCAAAGATTCTGGCGTAGACTTGGTGAA AAGGCACAGGAACCTAGTCAAATTAGATAGTGTGCCCTGATTCTTATGCT TGTTATATCAGCGGAATGTAAGCTCAAATTCAAGCAATGTTGCAATACTT TTTTCAGCCATGAGAAGGTCGCATCTCCTCAGTACATTTCATTTCCAACG CAAAATGAAAAGAGGCGTTGTCTATTTAGTTCTGACTCGAGATATTCTTC CCTTGCCTTTATCGCGGAGCTTGCTGCGTTTTGGTTGGGATATTTCTTTG GACTTCTTGGGTGGGGTAATAACGGTTGGTCTCCTTGCATAAAAGTGCAG TATCTATAGATTTTGTTTTCAGGTGTATCTGGTTTTGATGTTCGCTGTGG CCAGGACTATGGACTGTACACCTATTCTGTCGCTTCTGCTGGTATGACTT GGGATCCAATGGTGAATATATGATTGGTACTTTTGTTGGTTGATACGGAA TGGAGTATGTTCTTTACTTATTGTGGCATGATTCTGGAGTGGAACCCCTG CATGTGGCCTCATACACGTTTCATACAAACTTATCCACATTTCCATGCCC AGTCCTCTCAAGCATTCTGAACACCACATCAAACTTTCAACCTTCCATTT TCACCCTCTCAATAATAGGATTGCCAATTGTGAACGGACTCTCTGCTGAG ATGTACTTGTTCAGCACAGTGATGCTCAGATTTCCACTGCTGTGGGTATG ATAGGAGGTCCCAACCCTTACCATAACATTGGCTCCTACCAAATGTCAAT TGAAATTCAAAATTTGGCGCAGTCTTTTTCTTGGTTATCAGCTCAGTTTC GGTTTTCTGCGACATCTGATCCTGTTAAGAGTTCACTTCCTCAGTTTTGG AGCCTGCTGTTCTCCCTTATCTGCTTGTGTAGTTTCTGGGTTTGTGCATC TTGCAGCTTGCAATGCCTTGGTTTGTCTGCTGCTTCTTTCCCCTTCCCTA GCCCCTCCCTATGATTGTGCTAAAACTATGGCCCTATCCCTTGACAGGAG AAGCATACACCAACAGTGTACATGCACACTCAGACAGATATCAATTGCAA AATGCGCGCAATCCTTATTGACTGGATTGTGGAGGTACACCTGAAGTTCA AGCTGGCTGATCCCACACTGTACCTGACTTGCCACATCATCGACCGCTTC TGCATGCTGGAGAATGTCCACCGGAGCAAACTTCAACTGGTTGGGGTGAC AGCACTTCTGGTTGCCTGTAAGTATGAAGAGATTTATCCAACAGAGGTTC GAGACTGTGTCTACATTACGGACCACGCTTACTCAAGAGAGGAAGTGCTT GAGATGGAACAGAAGATTCTACGAAGGCTGAAGTTTGAGATAAGTGTCCC CACGGCGTGGACATTTCTCATCCGATTTAATAAGGTGGCCAGGGCAACAG ACCGACAGCACAACAGGTCTCAGTACTACTTGGAACGATGTCTTCAAGAA CACGATAGTCTCTCATTCAGGCCATCCTTATTGGCAGCTGCGGCTGTCTT CCTCTCTAGGATTCCAGACATGGATGTGGCAAGTGCTTGGGTGAGTTTGG GGTGTCCTTGCATGGGATGCATTTATTGTATAGGTTACGAAAAATTTATG CAACTGTGTGATTTTGATTTATACTTGGATGTTGATATGATTTGTTGTGA GGTTTGAAGGGGTTGTGAAACACCTTGCTTGCTACCTACACCATTTCCAT TTGTGTAGGACAGACGTTCACAGTATTTTCTTTTGTGTTGCAGTAGGTTT GCCCTTTCTGACTATGAACTGATCCCTCTGATGCTATTTTTCAGTTAAAT TATTTTTTATTGCTCTTGTTGACACTCGTGTAGGATGATACCATGGTCAA GTTTTGCAACATCCCACGGGAGAGCCTGGACAGCTGTGCACGCATGATTA TCAAGTTTCTTCTTGACGAACCCGTGACAGCCTCAAGGCGGCATCTTGTG GCAGTGAAGAGGAAGTTTGTTGCAGAGCGCTTTTTGGCTGTGGGGATTGA CAAGCTACCCAAAATGCCCCCAAAGCCCCAAATTGTCATCTAACCCCCTT TGCTGCGTACAGATTGGTTGCATTTGGCATCACTGTTGCCCCCTTAACCT GGTTGAACTAGGTTTAGCATTTTTGGTGTTTTTTTCTGCCTTTGGTTGGC ATGTGCCACATGTTTGGGCCTTGTCTATGGGCTGGTGAAGTTGACTGATT CAAGTGTTTGTGCACTGTGTGAAATCTGTGAATTGAGACTTGTGTATCAG TTTTGGGAAGGAACAGGAGAGGGCAGGAAATGAATCAAAACTACACTGCC CCATGGATGTTGGGCATCTCCTGATCAGCTGAGGAAGACATTTGCTGATT AGGGTGGTCAGATGGAGTTTGTCCTCGTGGATGGTAAAAGGTGGCCTGCT GTATGTGTGTCAGGAGTGAGGCCATCTGCTCCACCCTTATCCAAGACCAA TGATTAGATAGTGACAGGAGGGGTTGCCACAATGTCACTAACACGGATAG CGGAAGAGTGCCTCGTGTTGTGGGGATCTGTTGGGTGGTGTGGTTTAGGA TGTTGCAATCTCATTGGCATGTAAATTTCTTGCAGAGCACATGGGGTGAC TTGGGGCTGAACAGTCTTCGTGGCAAGCATAGGGTGCTTTTAGCTGCCAC CATCTTTGCATAGCTGCAGATGTCAGAAGGTGATGGGGTTTCTTTAGGGT GAGGTGGGAGAGAGTTGACATGAGCTGACTTGTGATGTTTAGTGTAGGAA ATGGAAGATGCGTGTTTTGATGCTGGTGCTTGGCTTGTCGCCTTGCACTG GCTTCATCCCCTGACATCTTTGTGTTCAGCTGTCAAGGTTTTTGTATGTT TTGTGGTGATCTAGAGGCTCAGGGTGCAGGGAAGTTGAGGTGTGTCACCT GCTACGGTTGTCACCGCTGTCCTGCTGCTGAAGGTCACACCATACACAGT GATTTTGC
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Coding sequence (CDS) from alignment at C-tenellus_contig1013:2..3659-

>mRNA_C-tenellus_contig1013.1.4 ID=mRNA_C-tenellus_contig1013.1.4|Name=mRNA_C-tenellus_contig1013.1.4|organism=Choristocarpus tenellus KU2346|type=CDS|length=1167bp|location=Sequence derived from alignment at C-tenellus_contig1013:2..3659- (Choristocarpus tenellus KU2346)
ATGAATGGTCAAGGGGGGATGCACAGGATGCAGCTACGGAAACGAAGCGC
GCTTGGGGATATTAGCAACGCCGCACGTCATGAAGCGGGCGGACCTGTAG
GGAATAAAGGAAGGAGGCGAAAAGCGCCAGGATTCAGTGTGTACGAGGAT
GCAAGTTGTGCTCACTCTAACGGTGGTGCTCCTAGCGGTCCTCATGAAGC
TCCCACTGAAACAAGCAAGGAGGAAGAATGCGCGTTACGAAAAAAGGTCA
ACCAAGAGACCAGTCGCAAGCTGACTCGAGAAACATTGGAGCGACACAGC
CGATGCAAGATGCCTCAGGCTCAGCTTAGCGAGCACGATGTCGAGGACAG
GGATAGCCCCGATGCCTGCGCGGAGTATGTGATAGATATGTACAAGCACT
TCAAGGAACTGGAGGAGAAGCATACACCAACAGTGTACATGCACACTCAG
ACAGATATCAATTGCAAAATGCGCGCAATCCTTATTGACTGGATTGTGGA
GGTACACCTGAAGTTCAAGCTGGCTGATCCCACACTGTACCTGACTTGCC
ACATCATCGACCGCTTCTGCATGCTGGAGAATGTCCACCGGAGCAAACTT
CAACTGGTTGGGGTGACAGCACTTCTGGTTGCCTGTAAGTATGAAGAGAT
TTATCCAACAGAGGTTCGAGACTGTGTCTACATTACGGACCACGCTTACT
CAAGAGAGGAAGTGCTTGAGATGGAACAGAAGATTCTACGAAGGCTGAAG
TTTGAGATAAGTGTCCCCACGGCGTGGACATTTCTCATCCGATTTAATAA
GGTGGCCAGGGCAACAGACCGACAGCACAACAGGTCTCAGTACTACTTGG
AACGATGTCTTCAAGAACACGATAGTCTCTCATTCAGGCCATCCTTATTG
GCAGCTGCGGCTGTCTTCCTCTCTAGGATTCCAGACATGGATGTGGCAAG
TGCTTGGGATGATACCATGGTCAAGTTTTGCAACATCCCACGGGAGAGCC
TGGACAGCTGTGCACGCATGATTATCAAGTTTCTTCTTGACGAACCCGTG
ACAGCCTCAAGGCGGCATCTTGTGGCAGTGAAGAGGAAGTTTGTTGCAGA
GCGCTTTTTGGCTGTGGGGATTGACAAGCTACCCAAAATGCCCCCAAAGC
CCCAAATTGTCATCTAA
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