mRNA_C-tenellus_contig1013.1.4 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig1013.1.4 vs. uniprot
Match: D7G632_ECTSI (Cyclin B1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G632_ECTSI) HSP 1 Score: 483 bits (1244), Expect = 1.610e-161 Identity = 229/289 (79.24%), Postives = 261/289 (90.31%), Query Frame = 3 Query: 324 RHSRCKMPQAQLSEHDVEDRDSPDACAEYVIDMYKHFKELEEKHTPTVYMHTQTDINCKMRAILIDWIVEVHLKFKLADPTLYLTCHIIDRFCMLENVHRSKLQLVGVTALLVACKYEEIYPTEVRDCVYITDHAYSREEVLEMEQKILRRLKFEISVPTAWTFLIRFNKVARATDRQHNRSQYYLERCLQEHDSLSFRPSLLAAAAVFLSRIPDMDVASAWDDTMVKFCNIPRESLDSCARMIIKFLLDEPVTASRRHLVAVKRKFVAERFLAVGIDKLPKMPPKPQI 1190 R RCK+P +++SEHDV DRD P ACAEY +DMYK +KELEEK+TPTVYMHTQ DINCKMRAILIDWIVEVHLKFKLADPTLYLTCHIIDRFCM ENVHRSKLQLVGVTALL+ACKYEEI+PTEVRDCVYITDHAY+REEVLEMEQ ILRRLKFE++VPT WTFL+RF K+A+ATDRQH+R+QYYLERCLQEH++LSFRPS+LAAA+VFL+RIPD + +AW D + KFCN PRE L+ CAR++IKFLLDEPVTAS+RHLVAVK+KF+ ERFLAV ID LP +P KP I Sbjct: 199 RLKRCKVPPSEVSEHDVVDRDDPIACAEYAMDMYKRYKELEEKYTPTVYMHTQVDINCKMRAILIDWIVEVHLKFKLADPTLYLTCHIIDRFCMQENVHRSKLQLVGVTALLIACKYEEIFPTEVRDCVYITDHAYTREEVLEMEQTILRRLKFELTVPTQWTFLVRFLKIAKATDRQHHRAQYYLERCLQEHEALSFRPSMLAAASVFLARIPDSGIKNAWPDALAKFCNTPREGLECCARLMIKFLLDEPVTASQRHLVAVKKKFLGERFLAVAIDDLPTLPRKPNI 487
BLAST of mRNA_C-tenellus_contig1013.1.4 vs. uniprot
Match: A0A836CA68_9STRA (Cyclin, N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA68_9STRA) HSP 1 Score: 328 bits (841), Expect = 1.830e-104 Identity = 159/255 (62.35%), Postives = 201/255 (78.82%), Query Frame = 3 Query: 420 MYKHFKELEEKHTPTVYMHTQTDINCKMRAILIDWIVEVHLKFKLADPTLYLTCHIIDRFCMLENVHRSKLQLVGVTALLVACKYEEIYPTEVRDCVYITDHAYSREEVLEMEQKILRRLKFEISVPTAWTFLIRFNKVARATDRQHNRSQYYLERCLQEHDSLSFRPSLLAAAAVFLSRIPDMDVASAWDDTMVKFCNIPRESLDSCARMIIKFLLDEPVTASRRHLVAVKRKFVAERFLAVGIDKLPKMPPKP 1184 MY + +LE + PTVYMH Q DIN KMR+ILIDWIVEVH KFKLA PTLYLTC+IIDR+CM+E V R KLQLVGVTALLVACKYEEI+P EVRDCVYITD+ Y+RE++LEME ++RRL+++++VPTAWTFL R +VARAT+ Q R+ YY ER LQEHD L+FRPSL+AA A +LSR+ D++ A AW + +FC + + L CA M+ FL EPVTA+ RHLVA KRKF+ ++FL+V I++LP++P P Sbjct: 1 MYSRYVDLEAMYAPTVYMHMQEDINEKMRSILIDWIVEVHFKFKLATPTLYLTCNIIDRYCMVEAVTRDKLQLVGVTALLVACKYEEIWPPEVRDCVYITDNTYTREQMLEMEMAMVRRLRYQLTVPTAWTFLARVLRVARATETQFQRACYYSERMLQEHDMLAFRPSLVAATATYLSRLVDIEDAHAWPPVLEEFCGLSVDMLMPCAHMMRSFLEAEPVTANHRHLVAAKRKFLQDKFLSVSIEELPQLPSPP 255
BLAST of mRNA_C-tenellus_contig1013.1.4 vs. uniprot
Match: A0A7S2GN01_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GN01_9STRA) HSP 1 Score: 273 bits (699), Expect = 5.690e-81 Identity = 141/271 (52.03%), Postives = 186/271 (68.63%), Query Frame = 3 Query: 369 DVEDRDSPDACAEYVIDMYKHFKELEEKHTPTVYMHTQTDINCKMRAILIDWIVEVHLKFKLADPTLYLTCHIIDRFCMLENVHRSKLQLVGVTALLVACKYEEIYPTEVRDCVYITDHAYSREEVLEMEQKILRRLKFEISVPTAWTFLIRFNKVARATDRQHN--RSQYYLERCLQEHDSLSFRPSLLAAAAVFL---SRIPDMDVASAWDDTMVKFCNIPRESLDSCARMIIKFLLDEPVTASRRHLVAVKRKFVAERFLAVGIDKLP 1166 D DRD+P A EY+ ++Y ++K+ E+ P +YMH Q+DI +MR+ILIDW+VEVHLKFKL TLYL H+ID+FC +V R +LQLVG+TALL+ACKYEEIYP EVRDCVYITDHAY+REEVL ME ++L+ ++ I+VPT + FLIR+ KV T ++ R+ YY ER LQEHD L ++PSL+AAA+V+L S PD W + K+ E + CAR I ++ + PVT SRR L AVK+KF ++FL V D P Sbjct: 173 DEADRDNPLAVVEYIEELYHYYKKAEQIKAPAMYMHRQSDITPRMRSILIDWLVEVHLKFKLVPATLYLCVHLIDQFCSSNDVLRGRLQLVGITALLIACKYEEIYPPEVRDCVYITDHAYTREEVLSMETEMLQHFEYNITVPTGYQFLIRYLKVMGCTPKEAASFRASYYAERSLQEHDMLLYKPSLVAAASVYLALKSERPD-----PWGRVIEKYSGYSLEQITPCARQICHYIRENPVTPSRRPLTAVKKKFETQKFLRVAEDPDP 438
BLAST of mRNA_C-tenellus_contig1013.1.4 vs. uniprot
Match: A0A7R9W0K7_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W0K7_9STRA) HSP 1 Score: 270 bits (689), Expect = 9.580e-80 Identity = 137/272 (50.37%), Postives = 191/272 (70.22%), Query Frame = 3 Query: 357 LSEHDVEDRDSPDACAEYVIDMYKHFKELEEKHTPTVYMHTQTDINCKMRAILIDWIVEVHLKFKLADPTLYLTCHIIDRFCMLENVHRSKLQLVGVTALLVACKYEEIYPTEVRDCVYITDHAYSREEVLEMEQKILRRLKFEISVPTAWTFLIRFNKVARATDRQHNRSQYYLERCLQEHDSLSFRPSLLAAAAVFLSRIPDMDVASAWD-----DTMVKFCNIPRESLDSCARMIIKFLLDEPVTASRRHLVAVKRKFVAERFLAVGID 1157 ++ HD +D+D+ A YV D+++HF E + +P +YM Q DIN KMRAIL+DW+VEVH+KF+L TLYL ++IDR+C L V RSKLQLVGVTALL+ACKYEEIYP EVRDCVYITD AY+R+EVL+MEQ +L+RL+F+I+VPTA+ FL RF +A+++ + YY ER LQEHD L F+PS++A +AV L+ + + D+ D +V++ R + +CA +I + +EP+TASRR LVAVKRK+ ++ V + Sbjct: 134 MAPHDADDKDNILQVAPYVTDIFQHFYRAEARSSPEMYMDHQADINAKMRAILVDWLVEVHMKFRLVPDTLYLCINLIDRYCSLVTVARSKLQLVGVTALLIACKYEEIYPPEVRDCVYITDRAYNRQEVLDMEQDMLQRLRFKITVPTAYPFLQRFLNMAKSSQLARIAANYYTERTLQEHDLLRFKPSVVAVSAVILA-LNNPDICEDGDCPGMPKILVEYTGFERSEIIACASLIATKVGEEPITASRRQLVAVKRKYDHRKYQHVSVS 404
BLAST of mRNA_C-tenellus_contig1013.1.4 vs. uniprot
Match: A0A6U6KAA6_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6KAA6_9STRA) HSP 1 Score: 269 bits (687), Expect = 2.730e-78 Identity = 139/270 (51.48%), Postives = 190/270 (70.37%), Query Frame = 3 Query: 357 LSEHDVEDRDSPDACAEYVIDMYKHFKELEEKHTPTVYMHTQTDINCKMRAILIDWIVEVHLKFKLADPTLYLTCHIIDRFCMLENVHRSKLQLVGVTALLVACKYEEIYPTEVRDCVYITDHAYSREEVLEMEQKILRRLKFEISVPTAWTFLIRFNKVARATDRQHNRSQYYLERCLQEHDSLSFRPSLLAAAAVFLSRIPDMDVASAWD-----DTMVKFCNIPRESLDSCARMIIKFLLDEPVTASRRHLVAVKRKFVAERFLAVG 1151 ++ HD DR + A YV D+++HF + E K P +YM Q DIN KMRAIL+DW+VEVH+KF+L TLYL ++IDR+C +V RSKLQLVGVTALL+ACKYEEIYP EVRDCVYITD AY+R+EVL+MEQ IL+RL+F+I+VPTA+ FL+RF + +A+ + YY+ER LQEHD L F+PS++AA+AV L+ + + D++ D ++++ L +CA +I + +EPVTASRR LVAVKRK+ ++ V Sbjct: 229 IAPHDTNDRGNTLQVAPYVTDIFQHFFQAEAKSCPEMYMDQQADINAKMRAILVDWLVEVHMKFRLVPDTLYLCINLIDRYCSHVSVARSKLQLVGVTALLIACKYEEIYPPEVRDCVYITDRAYNRQEVLDMEQDILQRLRFKITVPTAYPFLLRFLNMTKASQLSRIAANYYMERTLQEHDLLKFKPSVVAASAVVLA-LNNPDISDDHDCPGMPTVLMEYTGFQPSELMACAAIIATKVGEEPVTASRRQLVAVKRKYDHRKYQHVS 497
BLAST of mRNA_C-tenellus_contig1013.1.4 vs. uniprot
Match: A0A7S2XS29_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XS29_9STRA) HSP 1 Score: 266 bits (679), Expect = 1.410e-77 Identity = 139/278 (50.00%), Postives = 190/278 (68.35%), Query Frame = 3 Query: 351 AQLSEHDVEDRDSPDACAEYVIDMYKHFKELEEKHTPTVYMHTQTDINCKMRAILIDWIVEVHLKFKLADPTLYLTCHIIDRFCMLENVHRSKLQLVGVTALLVACKYEEIYPTEVRDCVYITDHAYSREEVLEMEQKILRRLKFEISVPTAWTFLIRFNKVARATDRQHNRSQYYLERCLQEHDSLSFRPSLLAAAAVFLS-RIPDMDVASA--------WDDTMVKFCNIPRESLDSCARMIIKFLLDEPVTASRRHLVAVKRKFVAERFLAVGID 1157 ++++ HD+ ++D EYV D++++ +E K P YM Q DIN KMRAIL+DW+VEVH+KF+L TLYL +IIDR+C L N+ RSKLQLVGVTALL+ACKYEEIYP EVRDCVYITD AY R+EVL+MEQ IL RL+F+I+VPT + FL RF + +A+ +QYY ER LQE+D L FRPSL+ AAAV L+ P + + D+ ++++ + CA +I + + +EPVTASRR LVAVKRK+ ++++ V I+ Sbjct: 187 SEIAPHDIHNKDDVLEVTEYVTDIFQYLYHVEAKSWPRGYMEKQQDINAKMRAILVDWLVEVHMKFRLNPETLYLCINIIDRYCNLVNIARSKLQLVGVTALLIACKYEEIYPPEVRDCVYITDRAYQRQEVLDMEQDILNRLRFKITVPTPYPFLQRFLTLTKASQLTRFAAQYYTERTLQEYDVLKFRPSLVCAAAVILALNNPAIAIKEGIRNYECPGLDNILLEYTGFAEADILECAAVIARKVGEEPVTASRRQLVAVKRKYDNKKYMNVSIE 464
BLAST of mRNA_C-tenellus_contig1013.1.4 vs. uniprot
Match: A0A6V2B684_9STRA (Hypothetical protein n=4 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2B684_9STRA) HSP 1 Score: 260 bits (665), Expect = 7.640e-75 Identity = 134/274 (48.91%), Postives = 186/274 (67.88%), Query Frame = 3 Query: 357 LSEHDVEDRDSPDACAEYVIDMYKHFKELEEKHTPTVYMHTQTDINCKMRAILIDWIVEVHLKFKLADPTLYLTCHIIDRFCMLENVHRSKLQLVGVTALLVACKYEEIYPTEVRDCVYITDHAYSREEVLEMEQKILRRLKFEISVPTAWTFLIRFNKVARATDRQHNRSQYYLERCLQEHDSLSFRPSLLAAAAVFLS-RIPDMDVASAWDDT--------MVKFCNIPRESLDSCARMIIKFLLDEPVTASRRHLVAVKRKFVAERFLAVG 1151 +++HD +D D P ++YV D+++H E + P +YM Q DIN KMRAIL+DW+VEVH+KF+L TLYL +IIDR+C V RSKLQLVGVTALL+ACKYEEIYP EVRDCVYITD AY ++EVL+MEQ +L RL+F+I+VPTA+ F++RF + +A+ + YY+ER LQEHD L RPSL+ AA+V L+ PD+ + + ++++ + + CA +I + + +EPVTASRR LVAVKRK+ ++ V Sbjct: 246 IAKHDEDDADEPLLVSDYVTDIFQHLFNAETRSRPRMYMDKQRDINAKMRAILVDWLVEVHMKFRLVPETLYLCVNIIDRYCNQVPVARSKLQLVGVTALLIACKYEEIYPPEVRDCVYITDRAYHKQEVLDMEQDMLHRLRFKITVPTAYPFILRFLNITKASSVARYAAHYYMERTLQEHDLLLHRPSLVCAASVVLALNNPDIIAKESTSNRERPGVPKILLEYTGFSKSDILECAAVIARKVGEEPVTASRRQLVAVKRKYDNRKYFHVS 519
BLAST of mRNA_C-tenellus_contig1013.1.4 vs. uniprot
Match: A0A7S1ZPT4_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZPT4_TRICV) HSP 1 Score: 258 bits (658), Expect = 1.690e-74 Identity = 133/272 (48.90%), Postives = 187/272 (68.75%), Query Frame = 3 Query: 357 LSEHDVEDRDSPDACAEYVIDMYKHFKELEEKHTPTVYMHTQTDINCKMRAILIDWIVEVHLKFKLADPTLYLTCHIIDRFCMLENVHRSKLQLVGVTALLVACKYEEIYPTEVRDCVYITDHAYSREEVLEMEQKILRRLKFEISVPTAWTFLIRFNKVARATDRQHNRSQYYLERCLQEHDSLSFRPSLLAAAAVFLSRIPDMDVASAWDDT-------MVKFCNIPRESLDSCARMIIKFLLDEPVTASRRHLVAVKRKFVAERFLAVG 1151 ++ HD D+++ YV D+++H E + P +YMH Q DIN KMRAIL+DW+VEVH+KF L TLYL +IIDR+C +V RSKLQLVGVTALL+ACKYEEIYP EVRDCVYITD AY+R+EVL+MEQ +L+RL+F+I+VPTA+ FL RF + +A + YY+ER LQEHD L ++PS++AA+ V L+ + + D+ + + ++++ + L SCA++I + ++PVTAS+R LVAVKRK+ +F V Sbjct: 188 IAPHDACDKENVLKVVPYVTDIFQHLYRAEARSCPEIYMHNQADINAKMRAILVDWLVEVHMKFHLVPETLYLCINIIDRYCSQVSVARSKLQLVGVTALLIACKYEEIYPPEVRDCVYITDRAYNRQEVLDMEQDMLQRLRFKITVPTAYPFLQRFLSLTKAPQLAQFAANYYMERTLQEHDLLQYKPSVVAASCVILA-LSNPDIPADTETLNPGMPRILLEYTGFEEKVLLSCAKLIATKVGEDPVTASKRQLVAVKRKYGHGKFRHVS 458
BLAST of mRNA_C-tenellus_contig1013.1.4 vs. uniprot
Match: A0A6U6K965_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6K965_9STRA) HSP 1 Score: 248 bits (632), Expect = 2.620e-73 Identity = 128/241 (53.11%), Postives = 173/241 (71.78%), Query Frame = 3 Query: 444 EEKHTPTVYMHTQTDINCKMRAILIDWIVEVHLKFKLADPTLYLTCHIIDRFCMLENVHRSKLQLVGVTALLVACKYEEIYPTEVRDCVYITDHAYSREEVLEMEQKILRRLKFEISVPTAWTFLIRFNKVARATDRQHNRSQYYLERCLQEHDSLSFRPSLLAAAAVFLSRIPDMDVASAWD-----DTMVKFCNIPRESLDSCARMIIKFLLDEPVTASRRHLVAVKRKFVAERFLAVG 1151 + K P +YM Q DIN KMRAIL+DW+VEVH+KF+L TLYL ++IDR+C +V RSKLQLVGVTALL+ACKYEEIYP EVRDCVYITD AY+R+EVL+MEQ IL+RL+F+I+VPTA+ FL+RF + +A+ + YY+ER LQEHD L F+PS++AA+AV L+ + + D++ D ++++ L +CA +I + +EPVTASRR LVAVKRK+ ++ V Sbjct: 17 QAKSCPEMYMDQQADINAKMRAILVDWLVEVHMKFRLVPDTLYLCINLIDRYCSHVSVARSKLQLVGVTALLIACKYEEIYPPEVRDCVYITDRAYNRQEVLDMEQDILQRLRFKITVPTAYPFLLRFLNMTKASQLSRIAANYYMERTLQEHDLLKFKPSVVAASAVVLA-LNNPDISDDHDCPGMPTVLMEYTGFQPSELMACAAIIATKVGEEPVTASRRQLVAVKRKYDHRKYQHVS 256
BLAST of mRNA_C-tenellus_contig1013.1.4 vs. uniprot
Match: A0A7S2PQG9_9STRA (G2/mitotic-specific cyclin-B3 n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PQG9_9STRA) HSP 1 Score: 248 bits (633), Expect = 9.890e-71 Identity = 131/276 (47.46%), Postives = 184/276 (66.67%), Query Frame = 3 Query: 357 LSEHDVEDRDSPDACAEYVIDMYKHFKELEEKHTPTVYMHTQTDINCKMRAILIDWIVEVHLKFKLADPTLYLTCHIIDRFCMLENVHRSKLQLVGVTALLVACKYEEIYPTEVRDCVYITDHAYSREEVLEMEQKILRRLKFEISVPTAWTFLIRFNKVARATDRQHNRSQYYLERCLQEHDSLSFRPSLLAAAAVFLS-RIPDMDVAS--------AWDDTMVKFCNIPRESLDSCARMIIKFLLDEPVTASRRHLVAVKRKFVAERFLAVGID 1157 ++ +D R P AEY+ D+++H + E ++ YM Q DIN +MRAILIDW+VEVH+KF+L TLYL IIDR+C +V RSKLQL+GVTALLVACK+EEIYP EVRDCVYITD AY+R+EVL+MEQ+IL+ L ++ISVPTA+ FL RF ++ A++ + + YYLER LQEH L FRPS++ A+AV L+ PD+ V + ++++ L +C + + + +EP+TASRR L AVK+K+ ++L V + Sbjct: 205 IAHYDAARRSDPQKVAEYITDLFQHLYKAETRYKVAPYMFRQEDINARMRAILIDWLVEVHMKFRLVPETLYLCVSIIDRYCCKVDVLRSKLQLIGVTALLVACKHEEIYPPEVRDCVYITDRAYNRQEVLDMEQEILKVLDWKISVPTAFPFLDRFLCLSDASEMTKHAAAYYLERTLQEHSFLQFRPSVVCASAVILALNNPDIRVQEEDLDRELPGFPKILMEYTGFSEFELTTCMERMAEKVGEEPITASRRQLNAVKKKYENSKYLEVSTN 480 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig1013.1.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig1013.1.4 >prot_C-tenellus_contig1013.1.4 ID=prot_C-tenellus_contig1013.1.4|Name=mRNA_C-tenellus_contig1013.1.4|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=389bp MNGQGGMHRMQLRKRSALGDISNAARHEAGGPVGNKGRRRKAPGFSVYEDback to top mRNA from alignment at C-tenellus_contig1013:2..3659- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig1013.1.4 ID=mRNA_C-tenellus_contig1013.1.4|Name=mRNA_C-tenellus_contig1013.1.4|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3658bp|location=Sequence derived from alignment at C-tenellus_contig1013:2..3659- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig1013:2..3659- >mRNA_C-tenellus_contig1013.1.4 ID=mRNA_C-tenellus_contig1013.1.4|Name=mRNA_C-tenellus_contig1013.1.4|organism=Choristocarpus tenellus KU2346|type=CDS|length=1167bp|location=Sequence derived from alignment at C-tenellus_contig1013:2..3659- (Choristocarpus tenellus KU2346)back to top |