mRNA_C-tenellus_contig10128.1.2 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10128.1.2 vs. uniprot
Match: A0A6H5JEX9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEX9_9PHAE) HSP 1 Score: 317 bits (813), Expect = 1.120e-105 Identity = 151/180 (83.89%), Postives = 164/180 (91.11%), Query Frame = 2 Query: 485 IVLPPPQQPGALASSTVFVGNLSWSTTSDDLRNFMSSVGEVVSAEVQSHADSGRSKGWGLVTYAEPTVAVAAIEQLNNVDFGGRPIHIRLDRKEVEASGGFPIFVGNLPWSTTDEDLQEIFSPYEPYDCHVKTNMAGRSRGFGILRFATPEMGQRAISDMQSYQIEGRPIQVREDREVGG 1024 +V PP A SSTVFVGNLSW TTS+DLR FM S+GEVVSAEVQSHADSGRSKGWGLVTYA+P +A AAIEQLNN D GGRPIHIRLDRKEVEASGGFP+FVGNLPWSTTDEDLQ+IF+PYEPYDCHVKTNMAGRSRGFGILRFATPE+GQRAIS+MQ+YQI+ RPIQVREDRE+GG Sbjct: 16 VVAPPVAAGAAPVSSTVFVGNLSWGTTSEDLRTFMGSLGEVVSAEVQSHADSGRSKGWGLVTYADPAIAEAAIEQLNNADLGGRPIHIRLDRKEVEASGGFPVFVGNLPWSTTDEDLQQIFAPYEPYDCHVKTNMAGRSRGFGILRFATPELGQRAISEMQNYQIDSRPIQVREDREIGG 195
BLAST of mRNA_C-tenellus_contig10128.1.2 vs. uniprot
Match: D8LK87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK87_ECTSI) HSP 1 Score: 313 bits (803), Expect = 4.630e-102 Identity = 160/213 (75.12%), Postives = 178/213 (83.57%), Query Frame = 2 Query: 407 YENDLVSFSSSV-SPHPHL-----LTPT-APLPIVLPPPQQPGALASSTVFVGNLSWSTTSDDLRNFMSSVGEVVSAEVQSHADSGRSKGWGLVTYAEPTVAVAAIEQLNNVDFGGRPIHIRLDRKEVEASGGFPIFVGNLPWSTTDEDLQEIFSPYEPYDCHVKTNMAGRSRGFGILRFATPEMGQRAISDMQSYQIEGRPIQVREDREVGG 1024 + DL +F ++ SP P L L PT A + V+ P SSTVFVGNLSW TTS+DLR FM S+GEVVSAEVQSHADSGRSKGWGLVTYA+P +A AAIEQLNN D GGRPIHIRLDRKEVEASGGFP+FVGNLPWSTTDEDLQ+IF+PYEPYDCHVKTNMAGRSRGFGILRFATPE+GQRAIS+MQ+YQI+ RPIQVREDRE+GG Sbjct: 5 HSQDLPTFINNFCSPPPPLARRASLRPTTAGVASVVAPXXXXXXXVSSTVFVGNLSWGTTSEDLRTFMGSLGEVVSAEVQSHADSGRSKGWGLVTYADPAIAEAAIEQLNNADLGGRPIHIRLDRKEVEASGGFPVFVGNLPWSTTDEDLQQIFAPYEPYDCHVKTNMAGRSRGFGILRFATPELGQRAISEMQNYQIDSRPIQVREDREIGG 217
BLAST of mRNA_C-tenellus_contig10128.1.2 vs. uniprot
Match: A0A835ZG94_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG94_9STRA) HSP 1 Score: 250 bits (639), Expect = 3.190e-78 Identity = 115/172 (66.86%), Postives = 142/172 (82.56%), Query Frame = 2 Query: 512 GALASSTVFVGNLSWSTTSDDLRNFMSSVGEVVSAEVQSHADSGRSKGWGLVTYAEPTVAVAAIEQLNNVDFGGRPIHIRLDRKEVEASGGFPIFVGNLPWSTTDEDLQEIFSPYEPYDCHVKTNMAGRSRGFGILRFATPEMGQRAISDMQSYQIEGRPIQVREDREVGGG 1027 G + TVFVGNL+W+TT+D+LR+FM+SVG V+S+ VQ HADSGRSKGWGLV Y+ A+AAIEQLNN + GGR +H+RLDR ++ SGGF +FVGNLPWSTT EDLQ +F+ ++PYD HVKTNMAGRSRGF ILRF+ PE GQ+AI+ M + I+GRPIQVREDR+VGGG Sbjct: 2 GEAGNRTVFVGNLAWNTTADELRDFMASVGTVLSSAVQCHADSGRSKGWGLVEYSTDGEAMAAIEQLNNAELGGRAVHVRLDRSNIDTSGGFAVFVGNLPWSTTTEDLQTLFAQFQPYDVHVKTNMAGRSRGFAILRFSAPEPGQQAIAAMNGFDIDGRPIQVREDRDVGGG 173
BLAST of mRNA_C-tenellus_contig10128.1.2 vs. uniprot
Match: A0A835YWJ3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWJ3_9STRA) HSP 1 Score: 237 bits (604), Expect = 6.130e-73 Identity = 111/168 (66.07%), Postives = 132/168 (78.57%), Query Frame = 2 Query: 512 GALASSTVFVGNLSWSTTSDDLRNFMSSVGEVVSAEVQSHADSGRSKGWGLVTYAEPTVAVAAIEQLNNVDFGGRPIHIRLDRKEVEASGGFPIFVGNLPWSTTDEDLQEIFSPYEPYDCHVKTNMAGRSRGFGILRFATPEMGQRAISDMQSYQIEGRPIQVREDRE 1015 G + TVFVGNLSW+TTS++LR+FM+S GE+VS+EVQ HADSGRSKGWGLV Y+ P A AAIE LNN D GGR +H+R DR +E SGGF +FVGNLPWS TD DL +F+ + P+D HVKTNM GRSRGFGILRF +PE G+ AI M ++IEGR IQVREDRE Sbjct: 2 GEANNRTVFVGNLSWNTTSEELRDFMASQGEIVSSEVQCHADSGRSKGWGLVQYSTPEEATAAIELLNNADLGGRSVHLRFDRTTIETSGGFAVFVGNLPWSVTDLDLTALFAKFNPFDAHVKTNMTGRSRGFGILRFHSPEEGREAIEAMNGFEIEGRHIQVREDRE 169
BLAST of mRNA_C-tenellus_contig10128.1.2 vs. uniprot
Match: A0A7S2V6P6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6P6_9STRA) HSP 1 Score: 207 bits (528), Expect = 1.520e-61 Identity = 102/172 (59.30%), Postives = 121/172 (70.35%), Query Frame = 2 Query: 515 ALASSTVFVGNLSWSTTSDDLRNFMSSVGEVVSAEVQSHADSGRSKGWGLVTYAEPTVAVAAIEQLNNVDFGGRPIHIRLDRKEVEASGGFPIFVGNLPWSTTDEDLQEIFSPYEPYDCHVKTNMAGRSRGFGILRFATPEMGQRAISDMQSYQIEGRPIQVREDREVGGGG 1030 A TVFVGNL WSTT+++L+ FMS G VVSA+VQ+HADSGRSKGWGLV Y+ A AI+ LN+ R IH+RLDR ++ + G +FVGNLPWSTT E L E+F YEP+D HVKTNMAGRSRGF ILRF + AI+DM Y +E R IQVREDR V GG Sbjct: 2 ATEMKTVFVGNLKWSTTNEELQEFMSQCGNVVSADVQAHADSGRSKGWGLVEYSTAEEAQNAIQLLNSTTLQERQIHVRLDRSNLDETAGVSVFVGNLPWSTTSETLAELFGSYEPFDVHVKTNMAGRSRGFAILRFNNQDQANAAITDMNGYNLEERNIQVREDRGVAEGG 173
BLAST of mRNA_C-tenellus_contig10128.1.2 vs. uniprot
Match: A0A7S2DGC6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DGC6_9STRA) HSP 1 Score: 204 bits (520), Expect = 4.160e-60 Identity = 93/174 (53.45%), Postives = 127/174 (72.99%), Query Frame = 2 Query: 503 QQPGALASSTVFVGNLSWSTTSDDLRNFMSSVGEVVSAEVQSHADSGRSKGWGLVTYAEPTVAVAAIEQLNNVDFGGRPIHIRLDRKEVEASGGFPIFVGNLPWSTTDEDLQEIFSPYEPYDCHVKTNMAGRSRGFGILRFATPEMGQRAISDMQSYQIEGRPIQVREDREVGG 1024 ++P + A T+FVGNLSW+TT+++L FM++ G V S +VQ+HAD+GRSKGW LVTY I+Q N +F GR +++R DR ++E GFP+FVGNLPWSTT EDL ++F + P+D HVKT MAGRSRGF ILRF + E+ Q+A + M +++EGR I+VREDR+ GG Sbjct: 26 EEPLSGAGCTLFVGNLSWATTNEELSEFMANYGTVASCQVQAHADTGRSKGWALVTYTTAEECTYTIQQTNGQEFNGRNLNVRQDRSQMEELSGFPVFVGNLPWSTTSEDLSDLFRDFGPFDVHVKTTMAGRSRGFAILRFESLEVAQQATAAMNGHELEGRSIEVREDRQTGG 199
BLAST of mRNA_C-tenellus_contig10128.1.2 vs. uniprot
Match: A0A7S2GAK8_9STRA (Hypothetical protein n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GAK8_9STRA) HSP 1 Score: 202 bits (515), Expect = 1.190e-59 Identity = 98/177 (55.37%), Postives = 128/177 (72.32%), Query Frame = 2 Query: 497 PPQQPGAL---ASSTVFVGNLSWSTTSDDLRNFMSSVGEVVSAEVQSHADSGRSKGWGLVTYAEPTVAVAAIEQLNNVDFGGRPIHIRLDRKEVEASGGFPIFVGNLPWSTTDEDLQEIFSPYEPYDCHVKTNMAGRSRGFGILRFATPEMGQRAISDMQSYQIEGRPIQVREDREV 1018 P QQP A+ +++T+FVGNL+WSTTS+DL+ + ++VG V+S EVQSHAD+GRSKGW LVTY+ A AI QL+ DF RP+++R+DR VE GG +FVGNLPWSTT+E L E+F + P+D +VKT M GRSRGF I+RF TPE + AI MQ + EGR + VR DR + Sbjct: 10 PVQQPSAIQVPSTATLFVGNLAWSTTSEDLKKYCAAVGNVLSVEVQSHADTGRSKGWALVTYSTSEEAAVAITQLHGHDFNDRPLNVRVDRSNVEQMGGTLVFVGNLPWSTTNEQLLELFGQFNPFDVNVKTTMNGRSRGFAIVRFDTPERAEVAIGTMQGFIFEGRTLDVRIDRPL 186
BLAST of mRNA_C-tenellus_contig10128.1.2 vs. uniprot
Match: A0A6U4FSY9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4FSY9_9STRA) HSP 1 Score: 193 bits (491), Expect = 1.500e-56 Identity = 85/165 (51.52%), Postives = 116/165 (70.30%), Query Frame = 2 Query: 518 LASSTVFVGNLSWSTTSDDLRNFMSSVGEVVSAEVQSHADSGRSKGWGLVTYAEPTVAVAAIEQLNNVDFGGRPIHIRLDRKEVEASGGFPIFVGNLPWSTTDEDLQEIFSPYEPYDCHVKTNMAGRSRGFGILRFATPEMGQRAISDMQSYQIEGRPIQVREDR 1012 + ++ +++GNL+W TT ++L F+ SVGEV++A VQ HADS RSKGWGL TYA P A A+ QL+ + GRP+H+R DR ++E GG IFVGN+PW T E L E F P++P D HVKTNMAGRSRGF I +F E+ A++ M +++GR +QVRED+ Sbjct: 1 MENTDIYIGNLTWDTTDEELLEFLGSVGEVLNASVQRHADSQRSKGWGLATYAAPEGAALAVSQLDQSELKGRPVHVRFDRSKIENVGGVNIFVGNIPWEITSEQLYESFFPFQPIDVHVKTNMAGRSRGFAIAKFPNQELADAAVAQMNGKELQGRQLQVREDK 165
BLAST of mRNA_C-tenellus_contig10128.1.2 vs. uniprot
Match: K8YWK2_NANGC (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YWK2_NANGC) HSP 1 Score: 180 bits (456), Expect = 1.140e-51 Identity = 86/163 (52.76%), Postives = 109/163 (66.87%), Query Frame = 2 Query: 524 SSTVFVGNLSWSTTSDDLRNFMSSVGEVVSAEVQSHADSGRSKGWGLVTYAEPTVAVAAIEQLNNVDFGGRPIHIRLDRKEVEASGGFPIFVGNLPWSTTDEDLQEIFSPYEPYDCHVKTNMAGRSRGFGILRFATPEMGQRAISDMQSYQIEGRPIQVREDR 1012 S TVFVGNLSW TT+D L M + G V+ EVQ+H+D+GRSKGW LVT+ A A+E L + GRP+++R DR E+E GF +FVGNLPW T L+ +FS + PYD H+KTNM+GRSRGFG+LRF + E QRAI M ++ R I VR DR Sbjct: 2 SKTVFVGNLSWGTTADSLTAIMETAGRVLGVEVQAHSDTGRSKGWALVTFETAEDASRAMELLCGREVEGRPLYVREDRTEIEKEEGFVVFVGNLPWDMTASGLRTVFSEFSPYDVHIKTNMSGRSRGFGLLRFRSSEEAQRAIEQMHGITVQERKILVRLDR 164
BLAST of mRNA_C-tenellus_contig10128.1.2 vs. uniprot
Match: A0A4D9CR95_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CR95_9STRA) HSP 1 Score: 153 bits (387), Expect = 4.590e-40 Identity = 72/142 (50.70%), Postives = 94/142 (66.20%), Query Frame = 2 Query: 587 MSSVGEVVSAEVQSHADSGRSKGWGLVTYAEPTVAVAAIEQLNNVDFGGRPIHIRLDRKEVEASGGFPIFVGNLPWSTTDEDLQEIFSPYEPYDCHVKTNMAGRSRGFGILRFATPEMGQRAISDMQSYQIEGRPIQVREDR 1012 M + G V+ EVQ+H+D+GRSKGW LVT+ A A+E L + GRP+++R DR E+E GF +FVGNLPW T L+ +FS + PYD H+KTNM+GRSRGFG+LRF + E QRAI M ++ R I VR DR Sbjct: 1 METAGRVLDVEVQAHSDTGRSKGWALVTFEAAEDASRAMELLCGREVEGRPLYVREDRTEIEKEEGFVVFVGNLPWDMTASGLRTVFSEFRPYDVHIKTNMSGRSRGFGLLRFRSSEEAQRAIEQMHGITVQERKILVRLDR 142 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10128.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10128.1.2 >prot_C-tenellus_contig10128.1.2 ID=prot_C-tenellus_contig10128.1.2|Name=mRNA_C-tenellus_contig10128.1.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=219bp MRTNGDKIGYENDLVSFSSSVSPHPHLLTPTAPLPIVLPPPQQPGALASSback to top mRNA from alignment at C-tenellus_contig10128:2..2422- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10128.1.2 ID=mRNA_C-tenellus_contig10128.1.2|Name=mRNA_C-tenellus_contig10128.1.2|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2421bp|location=Sequence derived from alignment at C-tenellus_contig10128:2..2422- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10128:2..2422- >mRNA_C-tenellus_contig10128.1.2 ID=mRNA_C-tenellus_contig10128.1.2|Name=mRNA_C-tenellus_contig10128.1.2|organism=Choristocarpus tenellus KU2346|type=CDS|length=657bp|location=Sequence derived from alignment at C-tenellus_contig10128:2..2422- (Choristocarpus tenellus KU2346)back to top |